RNA–Protein interactions for RNA: ENST00000273347.9

NXPE3-201, Transcript of neurexophilin and PC-esterase domain family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NXPE3, Length 3,941 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXPE3-201ENST00000273347 KRTAP19-4Q3LI73 84 aa4.59□□□□□ -1.67
NXPE3-201ENST00000273347 MUC12Q9UKN1 5478 aa4.59□□□□□ -1.67
NXPE3-201ENST00000273347 KRTAP4-3Q9BYR4 195 aa4.52□□□□□ -1.69
NXPE3-201ENST00000273347 INE1O15225 51 aa4.51□□□□□ -1.69
NXPE3-201ENST00000273347 LOC100996750A0A140TA64 210 aa4.47□□□□□ -1.69
NXPE3-201ENST00000273347 MT1MQ8N339 61 aa4.45□□□□□ -1.7
NXPE3-201ENST00000273347 KRTAP19-3Q7Z4W3 81 aa4.43□□□□□ -1.7
NXPE3-201ENST00000273347 LCE5AQ5TCM9 118 aa4.38□□□□□ -1.71
NXPE3-201ENST00000273347 MACF1Q9UPN3 7388 aaKnown RBP4.37□□□□□ -1.71
NXPE3-201ENST00000273347 MT1GP13640 62 aa4.36□□□□□ -1.71
NXPE3-201ENST00000273347 MDN1Q9NU22 5596 aa4.25□□□□□ -1.73
NXPE3-201ENST00000273347 DSTQ03001 7570 aaKnown RBP4.21□□□□□ -1.74
NXPE3-201ENST00000273347 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
NXPE3-201ENST00000273347 SYNE2Q8WXH0 6885 aaKnown RBP4.2□□□□□ -1.74
NXPE3-201ENST00000273347 KRTAP5-9P26371 169 aa4.16□□□□□ -1.74
NXPE3-201ENST00000273347 KRTAP5-5Q701N2 237 aaPredicted RBP4.1□□□□□ -1.75
NXPE3-201ENST00000273347 KRTAP9-2Q9BYQ4 174 aa4.1□□□□□ -1.75
NXPE3-201ENST00000273347 LCE1AQ5T7P2 110 aa4.09□□□□□ -1.75
NXPE3-201ENST00000273347 CRCT1Q9UGL9 99 aa4.08□□□□□ -1.76
NXPE3-201ENST00000273347 KRTAP6-1Q3LI64 71 aa4.04□□□□□ -1.76
NXPE3-201ENST00000273347 MT1AP04731 61 aa3.96□□□□□ -1.78
NXPE3-201ENST00000273347 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
NXPE3-201ENST00000273347 LCE3BQ5TA77 95 aa3.95□□□□□ -1.78
NXPE3-201ENST00000273347 KRTAP12-4P60329 112 aa3.89□□□□□ -1.79
NXPE3-201ENST00000273347 SPRR2EP22531 72 aa3.84□□□□□ -1.79
NXPE3-201ENST00000273347 SPRR2BP35325 72 aa3.84□□□□□ -1.79
NXPE3-201ENST00000273347 SPRR2AP35326 72 aa3.84□□□□□ -1.79
NXPE3-201ENST00000273347 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
NXPE3-201ENST00000273347 SYNE1Q8NF91 8797 aaKnown RBP3.82□□□□□ -1.8
NXPE3-201ENST00000273347 KRTAP9-4Q9BYQ2 154 aa3.75□□□□□ -1.81
NXPE3-201ENST00000273347 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.73□□□□□ -1.81
NXPE3-201ENST00000273347 KRTAP6-3Q3LI67 103 aa3.73□□□□□ -1.81
NXPE3-201ENST00000273347 SPRR2DP22532 72 aa3.67□□□□□ -1.82
NXPE3-201ENST00000273347 LCE3DQ9BYE3 92 aa3.67□□□□□ -1.82
NXPE3-201ENST00000273347 KRTAP5-4Q6L8H1 288 aa3.63□□□□□ -1.83
NXPE3-201ENST00000273347 KRTAP9-7A8MTY7 169 aa3.62□□□□□ -1.83
NXPE3-201ENST00000273347 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
NXPE3-201ENST00000273347 KRTAP6-2Q3LI66 62 aa3.59□□□□□ -1.83
NXPE3-201ENST00000273347 NEBP20929 6669 aa3.55□□□□□ -1.84
NXPE3-201ENST00000273347 MT3P25713 68 aa3.46□□□□□ -1.86
NXPE3-201ENST00000273347 PRM1P04553 51 aa3.45□□□□□ -1.86
NXPE3-201ENST00000273347 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.86
NXPE3-201ENST00000273347 KRTAP5-2Q701N4 177 aa3.4□□□□□ -1.87
NXPE3-201ENST00000273347 KRTAP20-2Q3LI61 65 aa3.31□□□□□ -1.88
NXPE3-201ENST00000273347 HMCN1Q96RW7 5635 aa3.31□□□□□ -1.88
NXPE3-201ENST00000273347 KRTAP5-3Q6L8H2 238 aa3.26□□□□□ -1.89
NXPE3-201ENST00000273347 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
NXPE3-201ENST00000273347 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
NXPE3-201ENST00000273347 MT4P47944 62 aa3.23□□□□□ -1.89
NXPE3-201ENST00000273347 LCE1DQ5T752 114 aa3.16□□□□□ -1.9
NXPE3-201ENST00000273347 KRTAP20-1Q3LI63 56 aa3.11□□□□□ -1.91
NXPE3-201ENST00000273347 MUC5ACP98088 5654 aa3.1□□□□□ -1.91
NXPE3-201ENST00000273347 KRTAP2-2Q9BYT5 123 aa3.07□□□□□ -1.92
NXPE3-201ENST00000273347 LCE1EQ5T753 118 aa2.95□□□□□ -1.94
NXPE3-201ENST00000273347 KRTAP5-10Q6L8G5 202 aa2.93□□□□□ -1.94
NXPE3-201ENST00000273347 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
NXPE3-201ENST00000273347 KRTAP4-2Q9BYR5 136 aa2.88□□□□□ -1.95
NXPE3-201ENST00000273347 LCE1CQ5T751 118 aa2.82□□□□□ -1.96
NXPE3-201ENST00000273347 LCE1BQ5T7P3 118 aa2.82□□□□□ -1.96
NXPE3-201ENST00000273347 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.73□□□□□ -1.97
NXPE3-201ENST00000273347 KRTAP4-11Q9BYQ6 195 aa2.71□□□□□ -1.98
NXPE3-201ENST00000273347 KRTAP5-7Q6L8G8 165 aa2.71□□□□□ -1.98
NXPE3-201ENST00000273347 KRTAP5-8O75690 187 aa2.7□□□□□ -1.98
NXPE3-201ENST00000273347 KRTAP21-2Q3LI59 83 aa2.68□□□□□ -1.98
NXPE3-201ENST00000273347 GPR98Q8WXG9 6306 aa2.66□□□□□ -1.98
NXPE3-201ENST00000273347 AHNAK2Q8IVF2 5795 aa2.66□□□□□ -1.98
NXPE3-201ENST00000273347 KRTAP5-11Q6L8G4 156 aa2.44□□□□□ -2.02
NXPE3-201ENST00000273347 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
NXPE3-201ENST00000273347 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
NXPE3-201ENST00000273347 KRTAP21-1Q3LI58 79 aa2.27□□□□□ -2.05
NXPE3-201ENST00000273347 KRTAP4-12Q9BQ66 201 aa2.2□□□□□ -2.06
NXPE3-201ENST00000273347 KRTAP9-9Q9BYP9 154 aa2.14□□□□□ -2.07
NXPE3-201ENST00000273347 PHGR1C9JFL3 82 aa2.12□□□□□ -2.07
NXPE3-201ENST00000273347 AHNAKQ09666 5890 aaKnown RBP2.09□□□□□ -2.08
NXPE3-201ENST00000273347 MUC19Q7Z5P9 8384 aa1.98□□□□□ -2.09
NXPE3-201ENST00000273347 LCE1FQ5T754 118 aa1.97□□□□□ -2.09
NXPE3-201ENST00000273347 MUC16Q8WXI7 14507 aa1.46□□□□□ -2.18
Retrieved 77 of 20,778 RNA–protein pairs in 40.4 ms