RNA–Protein interactions for RNA: ENST00000273286.5

LRTM1-201, Transcript of leucine rich repeats and transmembrane domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRTM1, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1-201ENST00000273286 PLAC4Q8WY50 150 aa4.06□□□□□ -1.76
LRTM1-201ENST00000273286 COA5Q86WW8 74 aa4.05□□□□□ -1.76
LRTM1-201ENST00000273286 LCE3DQ9BYE3 92 aa4.04□□□□□ -1.76
LRTM1-201ENST00000273286 ADM2Q7Z4H4 148 aa4.04□□□□□ -1.76
LRTM1-201ENST00000273286 KRTAP8-1Q8IUC2 63 aa4.04□□□□□ -1.76
LRTM1-201ENST00000273286 MT1XP80297 61 aa4.03□□□□□ -1.76
LRTM1-201ENST00000273286 KRTAP2-1Q9BYU5 128 aa4.01□□□□□ -1.77
LRTM1-201ENST00000273286 R4GN34 69 aa4.01□□□□□ -1.77
LRTM1-201ENST00000273286 PP632Q6XCG6 107 aa3.97□□□□□ -1.77
LRTM1-201ENST00000273286 SEC61GP60059 68 aa3.95□□□□□ -1.78
LRTM1-201ENST00000273286 SPRR2DP22532 72 aa3.95□□□□□ -1.78
LRTM1-201ENST00000273286 M0QZ58 72 aa3.93□□□□□ -1.78
LRTM1-201ENST00000273286 SERP1Q9Y6X1 66 aa3.93□□□□□ -1.78
LRTM1-201ENST00000273286 P0C880 135 aa3.9□□□□□ -1.78
LRTM1-201ENST00000273286 PRR15LQ9BU68 103 aa3.88□□□□□ -1.79
LRTM1-201ENST00000273286 A0A1B0GU69 56 aa3.87□□□□□ -1.79
LRTM1-201ENST00000273286 KRTAP5-8O75690 187 aa3.87□□□□□ -1.79
LRTM1-201ENST00000273286 LINC01554Q52M75 96 aa3.87□□□□□ -1.79
LRTM1-201ENST00000273286 V9GYY9 64 aa3.84□□□□□ -1.79
LRTM1-201ENST00000273286 LINC01558Q9Y6Z2 57 aa3.83□□□□□ -1.8
LRTM1-201ENST00000273286 RPS28P62857 69 aaKnown RBP3.81□□□□□ -1.8
LRTM1-201ENST00000273286 SMIM26A0A096LP01 95 aa3.8□□□□□ -1.8
LRTM1-201ENST00000273286 A0A1B0GU33 70 aa3.8□□□□□ -1.8
LRTM1-201ENST00000273286 DSTQ03001 7570 aaKnown RBP3.78□□□□□ -1.8
LRTM1-201ENST00000273286 Q1T7F1 81 aa3.77□□□□□ -1.81
LRTM1-201ENST00000273286 GPR98Q8WXG9 6306 aa3.74□□□□□ -1.81
LRTM1-201ENST00000273286 UQCR11O14957 56 aa3.72□□□□□ -1.81
LRTM1-201ENST00000273286 KRTAP13-4Q3LI77 160 aa3.72□□□□□ -1.81
LRTM1-201ENST00000273286 SPATA8Q6RVD6 105 aa3.71□□□□□ -1.82
LRTM1-201ENST00000273286 PSPHP1O15172 72 aa3.7□□□□□ -1.82
LRTM1-201ENST00000273286 A0A0D9SG42 100 aa3.69□□□□□ -1.82
LRTM1-201ENST00000273286 CAMK2N1Q7Z7J9 78 aa3.65□□□□□ -1.83
LRTM1-201ENST00000273286 MIR22HGQ0VDD5 57 aa3.64□□□□□ -1.83
LRTM1-201ENST00000273286 SPINT4Q6UDR6 99 aa3.64□□□□□ -1.83
LRTM1-201ENST00000273286 A6NED7 52 aa3.62□□□□□ -1.83
LRTM1-201ENST00000273286 KRTAP19-3Q7Z4W3 81 aa3.61□□□□□ -1.83
LRTM1-201ENST00000273286 KRTAP12-1P59990 96 aa3.61□□□□□ -1.83
LRTM1-201ENST00000273286 MUC19Q7Z5P9 8384 aa3.6□□□□□ -1.83
LRTM1-201ENST00000273286 K7ERS5 55 aa3.6□□□□□ -1.83
LRTM1-201ENST00000273286 KRTAP19-7Q3SYF9 63 aa3.6□□□□□ -1.83
LRTM1-201ENST00000273286 MT1EP04732 61 aa3.59□□□□□ -1.84
LRTM1-201ENST00000273286 MT1GP13640 62 aa3.53□□□□□ -1.84
LRTM1-201ENST00000273286 KRTAP5-7Q6L8G8 165 aa3.52□□□□□ -1.85
LRTM1-201ENST00000273286 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
LRTM1-201ENST00000273286 PRO0628Q9UI54 55 aa3.51□□□□□ -1.85
LRTM1-201ENST00000273286 HMCN1Q96RW7 5635 aa3.48□□□□□ -1.85
LRTM1-201ENST00000273286 KRTAP19-5Q3LI72 72 aa3.45□□□□□ -1.86
LRTM1-201ENST00000273286 MT4P47944 62 aa3.44□□□□□ -1.86
LRTM1-201ENST00000273286 MT1MQ8N339 61 aa3.43□□□□□ -1.86
LRTM1-201ENST00000273286 TNP1P09430 55 aa3.42□□□□□ -1.86
LRTM1-201ENST00000273286 BRK1Q8WUW1 75 aa3.41□□□□□ -1.86
LRTM1-201ENST00000273286 C10orf95Q9H7T3 257 aa3.41□□□□□ -1.86
LRTM1-201ENST00000273286 MT1LQ93083 61 aa3.4□□□□□ -1.87
LRTM1-201ENST00000273286 AHNAK2Q8IVF2 5795 aa3.4□□□□□ -1.87
LRTM1-201ENST00000273286 SPRR5A0A1B0GTR4 108 aa3.37□□□□□ -1.87
LRTM1-201ENST00000273286 KRTAP25-1Q3LHN0 102 aa3.36□□□□□ -1.87
LRTM1-201ENST00000273286 ROMO1P60602 79 aa3.35□□□□□ -1.87
LRTM1-201ENST00000273286 KRTAP5-10Q6L8G5 202 aa3.35□□□□□ -1.87
LRTM1-201ENST00000273286 PMAIP1Q13794 54 aa3.3□□□□□ -1.88
LRTM1-201ENST00000273286 KRTAP12-3P60328 96 aa3.2□□□□□ -1.9
LRTM1-201ENST00000273286 KRTAP20-2Q3LI61 65 aa3.19□□□□□ -1.9
LRTM1-201ENST00000273286 KRTAP12-4P60329 112 aa3.18□□□□□ -1.9
LRTM1-201ENST00000273286 KTN1-AS1Q86SY8 53 aa3.16□□□□□ -1.9
LRTM1-201ENST00000273286 SYNE1Q8NF91 8797 aaKnown RBP3.09□□□□□ -1.91
LRTM1-201ENST00000273286 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
LRTM1-201ENST00000273286 MT1AP04731 61 aa2.91□□□□□ -1.94
LRTM1-201ENST00000273286 MUC5ACP98088 5654 aa2.87□□□□□ -1.95
LRTM1-201ENST00000273286 AHNAKQ09666 5890 aaKnown RBP2.87□□□□□ -1.95
LRTM1-201ENST00000273286 KRTAP6-1Q3LI64 71 aa2.86□□□□□ -1.95
LRTM1-201ENST00000273286 MUC5BQ9HC84 5762 aaPredicted RBP2.85□□□□□ -1.95
LRTM1-201ENST00000273286 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
LRTM1-201ENST00000273286 LUZP6Q538Z0 58 aa2.58□□□□□ -2
LRTM1-201ENST00000273286 INE1O15225 51 aa2.17□□□□□ -2.06
LRTM1-201ENST00000273286 PHGR1C9JFL3 82 aa1.97□□□□□ -2.09
LRTM1-201ENST00000273286 PRM1P04553 51 aa1.7□□□□□ -2.14
LRTM1-201ENST00000273286 KRTAP21-1Q3LI58 79 aa1.53□□□□□ -2.16
LRTM1-201ENST00000273286 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 11.7 ms