RNA–Protein interactions for RNA: ENST00000272902.9

SUMF1-201, Transcript of sulfatase modifying factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUMF1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMF1-201ENST00000272902 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
SUMF1-201ENST00000272902 SYNE2Q8WXH0 6885 aaKnown RBP7.66□□□□□ -1.18
SUMF1-201ENST00000272902 INE1O15225 51 aa7.63□□□□□ -1.19
SUMF1-201ENST00000272902 KRTAP19-4Q3LI73 84 aa7.59□□□□□ -1.19
SUMF1-201ENST00000272902 KRTAP19-3Q7Z4W3 81 aa7.57□□□□□ -1.2
SUMF1-201ENST00000272902 KRTAP9-6A0A140TA67 174 aa7.52□□□□□ -1.21
SUMF1-201ENST00000272902 MT1GP13640 62 aa7.49□□□□□ -1.21
SUMF1-201ENST00000272902 KRTAP5-9P26371 169 aa7.48□□□□□ -1.21
SUMF1-201ENST00000272902 KRTAP9-6A8MVA2 160 aa7.47□□□□□ -1.21
SUMF1-201ENST00000272902 MT1MQ8N339 61 aa7.46□□□□□ -1.21
SUMF1-201ENST00000272902 KRTAP4-3Q9BYR4 195 aa7.43□□□□□ -1.22
SUMF1-201ENST00000272902 LCE5AQ5TCM9 118 aa7.43□□□□□ -1.22
SUMF1-201ENST00000272902 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.4□□□□□ -1.22
SUMF1-201ENST00000272902 MDN1Q9NU22 5596 aa7.37□□□□□ -1.23
SUMF1-201ENST00000272902 LCE1AQ5T7P2 110 aa7.3□□□□□ -1.24
SUMF1-201ENST00000272902 KRTAP6-3Q3LI67 103 aa7.23□□□□□ -1.25
SUMF1-201ENST00000272902 LOC100996750A0A140TA64 210 aa7.22□□□□□ -1.25
SUMF1-201ENST00000272902 SPRR2EP22531 72 aa7.22□□□□□ -1.25
SUMF1-201ENST00000272902 SPRR2BP35325 72 aa7.22□□□□□ -1.25
SUMF1-201ENST00000272902 SPRR2AP35326 72 aa7.22□□□□□ -1.25
SUMF1-201ENST00000272902 DSTQ03001 7570 aaKnown RBP7.18□□□□□ -1.26
SUMF1-201ENST00000272902 KRTAP2-3P0C7H8 128 aa6.99□□□□□ -1.29
SUMF1-201ENST00000272902 KRTAP2-4Q9BYR9 128 aa6.99□□□□□ -1.29
SUMF1-201ENST00000272902 KRTAP2-1Q9BYU5 128 aa6.99□□□□□ -1.29
SUMF1-201ENST00000272902 SPRR2DP22532 72 aa6.94□□□□□ -1.3
SUMF1-201ENST00000272902 KRTAP9-7A8MTY7 169 aa6.93□□□□□ -1.3
SUMF1-201ENST00000272902 NEBP20929 6669 aa6.74□□□□□ -1.33
SUMF1-201ENST00000272902 KRTAP5-5Q701N2 237 aaPredicted RBP6.7□□□□□ -1.34
SUMF1-201ENST00000272902 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
SUMF1-201ENST00000272902 KRTAP6-1Q3LI64 71 aa6.61□□□□□ -1.35
SUMF1-201ENST00000272902 MT1AP04731 61 aa6.59□□□□□ -1.35
SUMF1-201ENST00000272902 SYNE1Q8NF91 8797 aaKnown RBP6.4□□□□□ -1.39
SUMF1-201ENST00000272902 KRTAP5-4Q6L8H1 288 aa6.29□□□□□ -1.4
SUMF1-201ENST00000272902 KRTAP9-4Q9BYQ2 154 aa6.26□□□□□ -1.41
SUMF1-201ENST00000272902 KRTAP4-9Q9BYQ8 210 aa6.2□□□□□ -1.42
SUMF1-201ENST00000272902 KRTAP2-2Q9BYT5 123 aa6.17□□□□□ -1.42
SUMF1-201ENST00000272902 KRTAP12-4P60329 112 aa6.13□□□□□ -1.43
SUMF1-201ENST00000272902 KRTAP20-1Q3LI63 56 aa6.13□□□□□ -1.43
SUMF1-201ENST00000272902 MT4P47944 62 aa6.08□□□□□ -1.44
SUMF1-201ENST00000272902 LCE4AQ5TA78 99 aa6.08□□□□□ -1.44
SUMF1-201ENST00000272902 KRTAP4-6Q9BYQ5 205 aa6.07□□□□□ -1.44
SUMF1-201ENST00000272902 KRTAP6-2Q3LI66 62 aa6.05□□□□□ -1.44
SUMF1-201ENST00000272902 MT3P25713 68 aa5.95□□□□□ -1.46
SUMF1-201ENST00000272902 LCE1DQ5T752 114 aa5.91□□□□□ -1.46
SUMF1-201ENST00000272902 KRTAP20-2Q3LI61 65 aa5.9□□□□□ -1.46
SUMF1-201ENST00000272902 LCE3DQ9BYE3 92 aa5.88□□□□□ -1.47
SUMF1-201ENST00000272902 HMCN1Q96RW7 5635 aa5.86□□□□□ -1.47
SUMF1-201ENST00000272902 KRTAP5-2Q701N4 177 aa5.73□□□□□ -1.49
SUMF1-201ENST00000272902 LCE3EQ5T5B0 92 aa5.73□□□□□ -1.49
SUMF1-201ENST00000272902 OBSCNQ5VST9 7968 aa5.7□□□□□ -1.5
SUMF1-201ENST00000272902 KRTAP5-3Q6L8H2 238 aa5.67□□□□□ -1.5
SUMF1-201ENST00000272902 PRM1P04553 51 aa5.4□□□□□ -1.54
SUMF1-201ENST00000272902 LCE1EQ5T753 118 aa5.09□□□□□ -1.59
SUMF1-201ENST00000272902 KRTAP4-11Q9BYQ6 195 aa5.07□□□□□ -1.6
SUMF1-201ENST00000272902 AHNAK2Q8IVF2 5795 aa5.06□□□□□ -1.6
SUMF1-201ENST00000272902 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
SUMF1-201ENST00000272902 LCE1BQ5T7P3 118 aa4.89□□□□□ -1.63
SUMF1-201ENST00000272902 MUC5ACP98088 5654 aa4.89□□□□□ -1.63
SUMF1-201ENST00000272902 KRTAP5-8O75690 187 aa4.88□□□□□ -1.63
SUMF1-201ENST00000272902 KRTAP5-10Q6L8G5 202 aa4.85□□□□□ -1.63
SUMF1-201ENST00000272902 KRTAP4-2Q9BYR5 136 aa4.82□□□□□ -1.64
SUMF1-201ENST00000272902 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
SUMF1-201ENST00000272902 KRTAP5-7Q6L8G8 165 aa4.7□□□□□ -1.66
SUMF1-201ENST00000272902 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.46□□□□□ -1.7
SUMF1-201ENST00000272902 GPR98Q8WXG9 6306 aa4.41□□□□□ -1.7
SUMF1-201ENST00000272902 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
SUMF1-201ENST00000272902 KRTAP21-2Q3LI59 83 aa4.31□□□□□ -1.72
SUMF1-201ENST00000272902 MUC5BQ9HC84 5762 aaPredicted RBP4.25□□□□□ -1.73
SUMF1-201ENST00000272902 KRTAP5-11Q6L8G4 156 aa4.19□□□□□ -1.74
SUMF1-201ENST00000272902 KRTAP4-12Q9BQ66 201 aa4.03□□□□□ -1.76
SUMF1-201ENST00000272902 KRTAP4-4Q9BYR3 166 aa3.9□□□□□ -1.79
SUMF1-201ENST00000272902 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SUMF1-201ENST00000272902 AHNAKQ09666 5890 aaKnown RBP3.66□□□□□ -1.82
SUMF1-201ENST00000272902 PHGR1C9JFL3 82 aa3.62□□□□□ -1.83
SUMF1-201ENST00000272902 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
SUMF1-201ENST00000272902 MUC19Q7Z5P9 8384 aa3.37□□□□□ -1.87
SUMF1-201ENST00000272902 MUC16Q8WXI7 14507 aa2.34□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms