RNA–Protein interactions for RNA: ENST00000271850.11

TPM3-201, Transcript of tropomyosin 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene TPM3, Length 1,219 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-201ENST00000271850 SPTSSBQ8NFR3 76 aa3.22□□□□□ -1.89
TPM3-201ENST00000271850 AHNAK2Q8IVF2 5795 aa3.21□□□□□ -1.9
TPM3-201ENST00000271850 MT1GP13640 62 aa3.21□□□□□ -1.9
TPM3-201ENST00000271850 LCE3AQ5TA76 89 aa3.21□□□□□ -1.9
TPM3-201ENST00000271850 MT1MQ8N339 61 aa3.21□□□□□ -1.9
TPM3-201ENST00000271850 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
TPM3-201ENST00000271850 A0A0D9SG42 100 aa3.19□□□□□ -1.9
TPM3-201ENST00000271850 CHKB-CPT1BH3BT56 60 aa3.19□□□□□ -1.9
TPM3-201ENST00000271850 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
TPM3-201ENST00000271850 MT1LQ93083 61 aa3.19□□□□□ -1.9
TPM3-201ENST00000271850 K7ERU9 68 aa3.18□□□□□ -1.9
TPM3-201ENST00000271850 SNURFQ9Y675 71 aa3.17□□□□□ -1.9
TPM3-201ENST00000271850 PP632Q6XCG6 107 aa3.13□□□□□ -1.91
TPM3-201ENST00000271850 SPATA8Q6RVD6 105 aa3.12□□□□□ -1.91
TPM3-201ENST00000271850 J3QR89 54 aa3.11□□□□□ -1.91
TPM3-201ENST00000271850 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
TPM3-201ENST00000271850 SPANXA2-OT1Q8N9U9 137 aa3.11□□□□□ -1.91
TPM3-201ENST00000271850 SMIM20Q8N5G0 67 aa3.1□□□□□ -1.91
TPM3-201ENST00000271850 SPINT4Q6UDR6 99 aa3.08□□□□□ -1.92
TPM3-201ENST00000271850 C10orf95Q9H7T3 257 aa3.07□□□□□ -1.92
TPM3-201ENST00000271850 KRTAP5-7Q6L8G8 165 aa3.06□□□□□ -1.92
TPM3-201ENST00000271850 COA5Q86WW8 74 aa3.06□□□□□ -1.92
TPM3-201ENST00000271850 SMIM26A0A096LP01 95 aa3.04□□□□□ -1.92
TPM3-201ENST00000271850 A0A1B0GU33 70 aa3.02□□□□□ -1.93
TPM3-201ENST00000271850 PSPHP1O15172 72 aa3.01□□□□□ -1.93
TPM3-201ENST00000271850 KRTAP20-2Q3LI61 65 aa3.01□□□□□ -1.93
TPM3-201ENST00000271850 KRTAP5-5Q701N2 237 aaPredicted RBP3□□□□□ -1.93
TPM3-201ENST00000271850 A8MU10 97 aa2.99□□□□□ -1.93
TPM3-201ENST00000271850 SERP2Q8N6R1 65 aa2.99□□□□□ -1.93
TPM3-201ENST00000271850 PRO0628Q9UI54 55 aa2.99□□□□□ -1.93
TPM3-201ENST00000271850 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
TPM3-201ENST00000271850 NDUFAF8A1L188 74 aa2.94□□□□□ -1.94
TPM3-201ENST00000271850 ANAPC13Q9BS18 74 aa2.94□□□□□ -1.94
TPM3-201ENST00000271850 TNP1P09430 55 aa2.93□□□□□ -1.94
TPM3-201ENST00000271850 SYNE1Q8NF91 8797 aaKnown RBP2.93□□□□□ -1.94
TPM3-201ENST00000271850 SPRR5A0A1B0GTR4 108 aa2.92□□□□□ -1.94
TPM3-201ENST00000271850 KRTAP12-3P60328 96 aa2.91□□□□□ -1.94
TPM3-201ENST00000271850 H7BZZ5 65 aa2.9□□□□□ -1.95
TPM3-201ENST00000271850 CCDC179H3BU77 68 aa2.89□□□□□ -1.95
TPM3-201ENST00000271850 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
TPM3-201ENST00000271850 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
TPM3-201ENST00000271850 A0A1B0GU69 56 aa2.85□□□□□ -1.95
TPM3-201ENST00000271850 COX7CP15954 63 aa2.85□□□□□ -1.95
TPM3-201ENST00000271850 PMAIP1Q13794 54 aa2.85□□□□□ -1.95
TPM3-201ENST00000271850 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
TPM3-201ENST00000271850 RPS28P62857 69 aaKnown RBP2.84□□□□□ -1.95
TPM3-201ENST00000271850 LCE1CQ5T751 118 aa2.83□□□□□ -1.96
TPM3-201ENST00000271850 LCE1BQ5T7P3 118 aa2.83□□□□□ -1.96
TPM3-201ENST00000271850 TMEM258P61165 79 aa2.81□□□□□ -1.96
TPM3-201ENST00000271850 LUZP6Q538Z0 58 aa2.78□□□□□ -1.96
TPM3-201ENST00000271850 KRTAP6-1Q3LI64 71 aa2.72□□□□□ -1.97
TPM3-201ENST00000271850 ATP5EP56381 51 aaPredicted RBP2.71□□□□□ -1.98
TPM3-201ENST00000271850 MUC5BQ9HC84 5762 aaPredicted RBP2.7□□□□□ -1.98
TPM3-201ENST00000271850 LINC01558Q9Y6Z2 57 aa2.7□□□□□ -1.98
TPM3-201ENST00000271850 MT1AP04731 61 aa2.69□□□□□ -1.98
TPM3-201ENST00000271850 KRTAP25-1Q3LHN0 102 aa2.68□□□□□ -1.98
TPM3-201ENST00000271850 K7ERS5 55 aa2.67□□□□□ -1.98
TPM3-201ENST00000271850 PRR15LQ9BU68 103 aa2.66□□□□□ -1.98
TPM3-201ENST00000271850 MUC5ACP98088 5654 aa2.66□□□□□ -1.98
TPM3-201ENST00000271850 AHNAKQ09666 5890 aaKnown RBP2.64□□□□□ -1.99
TPM3-201ENST00000271850 A6NED7 52 aa2.61□□□□□ -1.99
TPM3-201ENST00000271850 UQCR11O14957 56 aa2.61□□□□□ -1.99
TPM3-201ENST00000271850 KRTAP6-2Q3LI66 62 aa2.61□□□□□ -1.99
TPM3-201ENST00000271850 Q1T7F1 81 aa2.58□□□□□ -2
TPM3-201ENST00000271850 KTN1-AS1Q86SY8 53 aa2.58□□□□□ -2
TPM3-201ENST00000271850 MIR22HGQ0VDD5 57 aa2.55□□□□□ -2
TPM3-201ENST00000271850 BRK1Q8WUW1 75 aa2.52□□□□□ -2.01
TPM3-201ENST00000271850 CDC42SE1Q9NRR8 79 aa2.42□□□□□ -2.02
TPM3-201ENST00000271850 ROMO1P60602 79 aa2.33□□□□□ -2.04
TPM3-201ENST00000271850 MUC19Q7Z5P9 8384 aa2.32□□□□□ -2.04
TPM3-201ENST00000271850 LCE3DQ9BYE3 92 aa2.16□□□□□ -2.06
TPM3-201ENST00000271850 KRTAP21-2Q3LI59 83 aa2.03□□□□□ -2.08
TPM3-201ENST00000271850 INE1O15225 51 aa1.92□□□□□ -2.1
TPM3-201ENST00000271850 PHGR1C9JFL3 82 aa1.82□□□□□ -2.12
TPM3-201ENST00000271850 KRTAP21-1Q3LI58 79 aa1.36□□□□□ -2.19
TPM3-201ENST00000271850 PRM1P04553 51 aa1.21□□□□□ -2.22
TPM3-201ENST00000271850 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 227 ms