RNA–Protein interactions for RNA: ENST00000271620.7

PRUNE1-201, Transcript of prune exopolyphosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRUNE1, Length 2,997 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-201ENST00000271620 KRTAP4-3Q9BYR4 195 aa3.69□□□□□ -1.82
PRUNE1-201ENST00000271620 INE1O15225 51 aa3.69□□□□□ -1.82
PRUNE1-201ENST00000271620 KRTAP19-6Q3LI70 58 aa3.69□□□□□ -1.82
PRUNE1-201ENST00000271620 LOC100996750A0A140TA64 210 aa3.66□□□□□ -1.82
PRUNE1-201ENST00000271620 KRTAP9-6A0A140TA67 174 aa3.66□□□□□ -1.82
PRUNE1-201ENST00000271620 CRCT1Q9UGL9 99 aa3.66□□□□□ -1.82
PRUNE1-201ENST00000271620 MACF1Q9UPN3 7388 aaKnown RBP3.63□□□□□ -1.83
PRUNE1-201ENST00000271620 KRTAP9-4Q9BYQ2 154 aa3.6□□□□□ -1.83
PRUNE1-201ENST00000271620 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
PRUNE1-201ENST00000271620 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
PRUNE1-201ENST00000271620 MT1GP13640 62 aa3.59□□□□□ -1.83
PRUNE1-201ENST00000271620 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
PRUNE1-201ENST00000271620 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
PRUNE1-201ENST00000271620 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
PRUNE1-201ENST00000271620 KRTAP9-7A8MTY7 169 aa3.54□□□□□ -1.84
PRUNE1-201ENST00000271620 LCE5AQ5TCM9 118 aa3.54□□□□□ -1.84
PRUNE1-201ENST00000271620 KRTAP4-6Q9BYQ5 205 aa3.54□□□□□ -1.84
PRUNE1-201ENST00000271620 MDN1Q9NU22 5596 aa3.53□□□□□ -1.84
PRUNE1-201ENST00000271620 SYNE1Q8NF91 8797 aaKnown RBP3.52□□□□□ -1.85
PRUNE1-201ENST00000271620 KRTAP19-3Q7Z4W3 81 aa3.51□□□□□ -1.85
PRUNE1-201ENST00000271620 MT1MQ8N339 61 aa3.51□□□□□ -1.85
PRUNE1-201ENST00000271620 KRTAP9-9Q9BYP9 154 aa3.51□□□□□ -1.85
PRUNE1-201ENST00000271620 SPRR2FQ96RM1 72 aa3.5□□□□□ -1.85
PRUNE1-201ENST00000271620 OBSCNQ5VST9 7968 aa3.4□□□□□ -1.86
PRUNE1-201ENST00000271620 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.39□□□□□ -1.87
PRUNE1-201ENST00000271620 LCE3BQ5TA77 95 aa3.33□□□□□ -1.88
PRUNE1-201ENST00000271620 KRTAP4-9Q9BYQ8 210 aa3.3□□□□□ -1.88
PRUNE1-201ENST00000271620 KRTAP12-4P60329 112 aa3.27□□□□□ -1.89
PRUNE1-201ENST00000271620 KRTAP4-12Q9BQ66 201 aa3.27□□□□□ -1.89
PRUNE1-201ENST00000271620 KRTAP6-1Q3LI64 71 aa3.23□□□□□ -1.89
PRUNE1-201ENST00000271620 LCE1AQ5T7P2 110 aa3.21□□□□□ -1.9
PRUNE1-201ENST00000271620 SPRR2EP22531 72 aa3.16□□□□□ -1.9
PRUNE1-201ENST00000271620 SPRR2BP35325 72 aa3.16□□□□□ -1.9
PRUNE1-201ENST00000271620 SPRR2AP35326 72 aa3.16□□□□□ -1.9
PRUNE1-201ENST00000271620 KRTAP6-3Q3LI67 103 aa3.15□□□□□ -1.91
PRUNE1-201ENST00000271620 KRTAP5-9P26371 169 aa3.12□□□□□ -1.91
PRUNE1-201ENST00000271620 LCE1FQ5T754 118 aa3.12□□□□□ -1.91
PRUNE1-201ENST00000271620 MT1AP04731 61 aa3.1□□□□□ -1.91
PRUNE1-201ENST00000271620 NEBP20929 6669 aa3.1□□□□□ -1.91
PRUNE1-201ENST00000271620 KRTAP5-5Q701N2 237 aaPredicted RBP3.06□□□□□ -1.92
PRUNE1-201ENST00000271620 LCE3DQ9BYE3 92 aa3.05□□□□□ -1.92
PRUNE1-201ENST00000271620 SPRR2DP22532 72 aa3.01□□□□□ -1.93
PRUNE1-201ENST00000271620 LCE3EQ5T5B0 92 aa2.98□□□□□ -1.93
PRUNE1-201ENST00000271620 LCE1DQ5T752 114 aa2.98□□□□□ -1.93
PRUNE1-201ENST00000271620 KRTAP6-2Q3LI66 62 aa2.91□□□□□ -1.94
PRUNE1-201ENST00000271620 MT3P25713 68 aa2.91□□□□□ -1.94
PRUNE1-201ENST00000271620 PRM1P04553 51 aa2.89□□□□□ -1.95
PRUNE1-201ENST00000271620 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
PRUNE1-201ENST00000271620 KRTAP2-2Q9BYT5 123 aa2.88□□□□□ -1.95
PRUNE1-201ENST00000271620 KRTAP4-11Q9BYQ6 195 aa2.8□□□□□ -1.96
PRUNE1-201ENST00000271620 KRTAP4-2Q9BYR5 136 aa2.78□□□□□ -1.96
PRUNE1-201ENST00000271620 MT4P47944 62 aa2.75□□□□□ -1.97
PRUNE1-201ENST00000271620 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
PRUNE1-201ENST00000271620 HMCN1Q96RW7 5635 aa2.67□□□□□ -1.98
PRUNE1-201ENST00000271620 KRTAP20-2Q3LI61 65 aa2.58□□□□□ -2
PRUNE1-201ENST00000271620 LCE1EQ5T753 118 aa2.57□□□□□ -2
PRUNE1-201ENST00000271620 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
PRUNE1-201ENST00000271620 KRTAP5-2Q701N4 177 aa2.49□□□□□ -2.01
PRUNE1-201ENST00000271620 MUC5ACP98088 5654 aa2.47□□□□□ -2.01
PRUNE1-201ENST00000271620 KRTAP5-3Q6L8H2 238 aa2.43□□□□□ -2.02
PRUNE1-201ENST00000271620 LCE1BQ5T7P3 118 aa2.4□□□□□ -2.03
PRUNE1-201ENST00000271620 AHNAK2Q8IVF2 5795 aa2.34□□□□□ -2.03
PRUNE1-201ENST00000271620 KRTAP5-10Q6L8G5 202 aa2.24□□□□□ -2.05
PRUNE1-201ENST00000271620 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
PRUNE1-201ENST00000271620 LCE1CQ5T751 118 aa2.14□□□□□ -2.07
PRUNE1-201ENST00000271620 MUC19Q7Z5P9 8384 aa2.13□□□□□ -2.07
PRUNE1-201ENST00000271620 MUC5BQ9HC84 5762 aaPredicted RBP2.13□□□□□ -2.07
PRUNE1-201ENST00000271620 AHNAKQ09666 5890 aaKnown RBP2.1□□□□□ -2.07
PRUNE1-201ENST00000271620 KRTAP5-7Q6L8G8 165 aa2.07□□□□□ -2.08
PRUNE1-201ENST00000271620 KRTAP5-8O75690 187 aa2.06□□□□□ -2.08
PRUNE1-201ENST00000271620 KRTAP21-2Q3LI59 83 aa2.05□□□□□ -2.08
PRUNE1-201ENST00000271620 KRTAP4-4Q9BYR3 166 aa2.02□□□□□ -2.09
PRUNE1-201ENST00000271620 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
PRUNE1-201ENST00000271620 KRTAP5-11Q6L8G4 156 aa1.91□□□□□ -2.1
PRUNE1-201ENST00000271620 KRTAP21-1Q3LI58 79 aa1.73□□□□□ -2.13
PRUNE1-201ENST00000271620 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
PRUNE1-201ENST00000271620 MUC16Q8WXI7 14507 aa1.05□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 7.3 ms