RNA–Protein interactions for RNA: ENST00000269385.8

CBX8-201, Transcript of chromobox 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX8, Length 3,791 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-201ENST00000269385 KRTAP9-6A0A140TA67 174 aa5.47□□□□□ -1.53
CBX8-201ENST00000269385 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.53
CBX8-201ENST00000269385 FCGBPQ9Y6R7 5405 aaPredicted RBP5.42□□□□□ -1.54
CBX8-201ENST00000269385 SYNE1Q8NF91 8797 aaKnown RBP5.33□□□□□ -1.56
CBX8-201ENST00000269385 MT1EP04732 61 aa5.22□□□□□ -1.57
CBX8-201ENST00000269385 MT1LQ93083 61 aa5.19□□□□□ -1.58
CBX8-201ENST00000269385 MACF1Q9UPN3 7388 aaKnown RBP5.17□□□□□ -1.58
CBX8-201ENST00000269385 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.17□□□□□ -1.58
CBX8-201ENST00000269385 MUC12Q9UKN1 5478 aa5.11□□□□□ -1.59
CBX8-201ENST00000269385 PRM1P04553 51 aa5.11□□□□□ -1.59
CBX8-201ENST00000269385 OBSCNQ5VST9 7968 aa5.1□□□□□ -1.59
CBX8-201ENST00000269385 MT1GP13640 62 aa5.07□□□□□ -1.6
CBX8-201ENST00000269385 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
CBX8-201ENST00000269385 SYNE2Q8WXH0 6885 aaKnown RBP5.06□□□□□ -1.6
CBX8-201ENST00000269385 LCE3BQ5TA77 95 aa5.05□□□□□ -1.6
CBX8-201ENST00000269385 KRTAP19-4Q3LI73 84 aa5.04□□□□□ -1.6
CBX8-201ENST00000269385 KRTAP9-7A8MTY7 169 aa4.96□□□□□ -1.62
CBX8-201ENST00000269385 KRTAP4-9Q9BYQ8 210 aa4.95□□□□□ -1.62
CBX8-201ENST00000269385 KRTAP4-3Q9BYR4 195 aa4.95□□□□□ -1.62
CBX8-201ENST00000269385 KRTAP6-3Q3LI67 103 aa4.95□□□□□ -1.62
CBX8-201ENST00000269385 KRTAP5-9P26371 169 aa4.93□□□□□ -1.62
CBX8-201ENST00000269385 LCE1AQ5T7P2 110 aa4.91□□□□□ -1.62
CBX8-201ENST00000269385 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
CBX8-201ENST00000269385 LCE3EQ5T5B0 92 aa4.9□□□□□ -1.62
CBX8-201ENST00000269385 MT1MQ8N339 61 aa4.86□□□□□ -1.63
CBX8-201ENST00000269385 KRTAP19-3Q7Z4W3 81 aa4.82□□□□□ -1.64
CBX8-201ENST00000269385 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
CBX8-201ENST00000269385 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
CBX8-201ENST00000269385 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
CBX8-201ENST00000269385 MDN1Q9NU22 5596 aa4.76□□□□□ -1.65
CBX8-201ENST00000269385 KRTAP2-2Q9BYT5 123 aa4.75□□□□□ -1.65
CBX8-201ENST00000269385 LCE1EQ5T753 118 aa4.73□□□□□ -1.65
CBX8-201ENST00000269385 NEBP20929 6669 aa4.71□□□□□ -1.66
CBX8-201ENST00000269385 SPRR2EP22531 72 aa4.65□□□□□ -1.66
CBX8-201ENST00000269385 SPRR2BP35325 72 aa4.65□□□□□ -1.66
CBX8-201ENST00000269385 SPRR2AP35326 72 aa4.65□□□□□ -1.66
CBX8-201ENST00000269385 KRTAP5-5Q701N2 237 aaPredicted RBP4.57□□□□□ -1.68
CBX8-201ENST00000269385 KRTAP6-2Q3LI66 62 aa4.54□□□□□ -1.68
CBX8-201ENST00000269385 MT1AP04731 61 aa4.52□□□□□ -1.69
CBX8-201ENST00000269385 SPRR2DP22532 72 aa4.49□□□□□ -1.69
CBX8-201ENST00000269385 LCE1DQ5T752 114 aa4.46□□□□□ -1.7
CBX8-201ENST00000269385 MUC19Q7Z5P9 8384 aa4.43□□□□□ -1.7
CBX8-201ENST00000269385 KRTAP6-1Q3LI64 71 aa4.42□□□□□ -1.7
CBX8-201ENST00000269385 KRTAP20-1Q3LI63 56 aa4.37□□□□□ -1.71
CBX8-201ENST00000269385 KRTAP9-4Q9BYQ2 154 aa4.1□□□□□ -1.75
CBX8-201ENST00000269385 KRTAP5-4Q6L8H1 288 aa4.07□□□□□ -1.76
CBX8-201ENST00000269385 LCE1FQ5T754 118 aa4.03□□□□□ -1.76
CBX8-201ENST00000269385 LCE4AQ5TA78 99 aa4□□□□□ -1.77
CBX8-201ENST00000269385 MT3P25713 68 aa3.91□□□□□ -1.78
CBX8-201ENST00000269385 MT4P47944 62 aa3.9□□□□□ -1.78
CBX8-201ENST00000269385 KRTAP4-6Q9BYQ5 205 aa3.88□□□□□ -1.79
CBX8-201ENST00000269385 HMCN1Q96RW7 5635 aa3.87□□□□□ -1.79
CBX8-201ENST00000269385 KRTAP4-11Q9BYQ6 195 aa3.81□□□□□ -1.8
CBX8-201ENST00000269385 KRTAP5-2Q701N4 177 aa3.79□□□□□ -1.8
CBX8-201ENST00000269385 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
CBX8-201ENST00000269385 KRTAP5-3Q6L8H2 238 aa3.69□□□□□ -1.82
CBX8-201ENST00000269385 AHNAK2Q8IVF2 5795 aa3.58□□□□□ -1.84
CBX8-201ENST00000269385 GPR98Q8WXG9 6306 aa3.47□□□□□ -1.85
CBX8-201ENST00000269385 KRTAP5-10Q6L8G5 202 aa3.46□□□□□ -1.86
CBX8-201ENST00000269385 LCE1BQ5T7P3 118 aa3.42□□□□□ -1.86
CBX8-201ENST00000269385 MUC5ACP98088 5654 aa3.42□□□□□ -1.86
CBX8-201ENST00000269385 KRTAP5-8O75690 187 aa3.25□□□□□ -1.89
CBX8-201ENST00000269385 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
CBX8-201ENST00000269385 KRTAP9-9Q9BYP9 154 aa3.24□□□□□ -1.89
CBX8-201ENST00000269385 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
CBX8-201ENST00000269385 KRTAP4-12Q9BQ66 201 aa3.2□□□□□ -1.9
CBX8-201ENST00000269385 KRTAP4-2Q9BYR5 136 aa3.2□□□□□ -1.9
CBX8-201ENST00000269385 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
CBX8-201ENST00000269385 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.03□□□□□ -1.92
CBX8-201ENST00000269385 KRTAP21-2Q3LI59 83 aa2.98□□□□□ -1.93
CBX8-201ENST00000269385 KRTAP21-1Q3LI58 79 aa2.94□□□□□ -1.94
CBX8-201ENST00000269385 KRTAP4-4Q9BYR3 166 aa2.89□□□□□ -1.95
CBX8-201ENST00000269385 MUC5BQ9HC84 5762 aaPredicted RBP2.87□□□□□ -1.95
CBX8-201ENST00000269385 AHNAKQ09666 5890 aaKnown RBP2.79□□□□□ -1.96
CBX8-201ENST00000269385 KRTAP5-11Q6L8G4 156 aa2.69□□□□□ -1.98
CBX8-201ENST00000269385 PHGR1C9JFL3 82 aa2.35□□□□□ -2.03
CBX8-201ENST00000269385 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 98.2 ms