RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 MT1LQ93083 61 aa3.24□□□□□ -1.89
SSR3-201ENST00000265044 MUC12Q9UKN1 5478 aa3.24□□□□□ -1.89
SSR3-201ENST00000265044 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
SSR3-201ENST00000265044 SPRR5A0A1B0GTR4 108 aa3.22□□□□□ -1.89
SSR3-201ENST00000265044 DSTQ03001 7570 aaKnown RBP3.21□□□□□ -1.89
SSR3-201ENST00000265044 MT1GP13640 62 aa3.2□□□□□ -1.9
SSR3-201ENST00000265044 KRTAP19-3Q7Z4W3 81 aa3.2□□□□□ -1.9
SSR3-201ENST00000265044 KRTAP19-4Q3LI73 84 aa3.18□□□□□ -1.9
SSR3-201ENST00000265044 SPRR2EP22531 72 aa3.18□□□□□ -1.9
SSR3-201ENST00000265044 SPRR2BP35325 72 aa3.18□□□□□ -1.9
SSR3-201ENST00000265044 SPRR2AP35326 72 aa3.18□□□□□ -1.9
SSR3-201ENST00000265044 KRTAP9-6A0A140TA67 174 aa3.18□□□□□ -1.9
SSR3-201ENST00000265044 LCE3BQ5TA77 95 aa3.15□□□□□ -1.91
SSR3-201ENST00000265044 KRTAP4-3Q9BYR4 195 aa3.14□□□□□ -1.91
SSR3-201ENST00000265044 MT1MQ8N339 61 aa3.12□□□□□ -1.91
SSR3-201ENST00000265044 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.11□□□□□ -1.91
SSR3-201ENST00000265044 SPRR2DP22532 72 aa3.05□□□□□ -1.92
SSR3-201ENST00000265044 KRTAP9-6A8MVA2 160 aa3.03□□□□□ -1.92
SSR3-201ENST00000265044 SYNE1Q8NF91 8797 aaKnown RBP3.03□□□□□ -1.92
SSR3-201ENST00000265044 MDN1Q9NU22 5596 aa3.02□□□□□ -1.93
SSR3-201ENST00000265044 LCE5AQ5TCM9 118 aa3.02□□□□□ -1.93
SSR3-201ENST00000265044 LCE1AQ5T7P2 110 aa3□□□□□ -1.93
SSR3-201ENST00000265044 KRTAP6-3Q3LI67 103 aa2.98□□□□□ -1.93
SSR3-201ENST00000265044 KRTAP9-7A8MTY7 169 aa2.96□□□□□ -1.94
SSR3-201ENST00000265044 KRTAP5-9P26371 169 aa2.95□□□□□ -1.94
SSR3-201ENST00000265044 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
SSR3-201ENST00000265044 KRTAP9-9Q9BYP9 154 aa2.91□□□□□ -1.94
SSR3-201ENST00000265044 KRTAP9-4Q9BYQ2 154 aa2.91□□□□□ -1.94
SSR3-201ENST00000265044 INE1O15225 51 aa2.87□□□□□ -1.95
SSR3-201ENST00000265044 LCE4AQ5TA78 99 aa2.82□□□□□ -1.96
SSR3-201ENST00000265044 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
SSR3-201ENST00000265044 KRTAP2-3P0C7H8 128 aa2.79□□□□□ -1.96
SSR3-201ENST00000265044 KRTAP2-4Q9BYR9 128 aa2.79□□□□□ -1.96
SSR3-201ENST00000265044 KRTAP2-1Q9BYU5 128 aa2.79□□□□□ -1.96
SSR3-201ENST00000265044 KRTAP12-4P60329 112 aa2.78□□□□□ -1.97
SSR3-201ENST00000265044 MT1AP04731 61 aa2.76□□□□□ -1.97
SSR3-201ENST00000265044 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
SSR3-201ENST00000265044 LCE1DQ5T752 114 aa2.76□□□□□ -1.97
SSR3-201ENST00000265044 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
SSR3-201ENST00000265044 NEBP20929 6669 aa2.73□□□□□ -1.97
SSR3-201ENST00000265044 MT4P47944 62 aa2.73□□□□□ -1.97
SSR3-201ENST00000265044 KRTAP4-9Q9BYQ8 210 aa2.68□□□□□ -1.98
SSR3-201ENST00000265044 KRTAP20-1Q3LI63 56 aa2.66□□□□□ -1.98
SSR3-201ENST00000265044 LCE3DQ9BYE3 92 aa2.64□□□□□ -1.99
SSR3-201ENST00000265044 KRTAP2-2Q9BYT5 123 aa2.63□□□□□ -1.99
SSR3-201ENST00000265044 KRTAP4-2Q9BYR5 136 aa2.62□□□□□ -1.99
SSR3-201ENST00000265044 MT3P25713 68 aa2.62□□□□□ -1.99
SSR3-201ENST00000265044 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
SSR3-201ENST00000265044 KRTAP5-5Q701N2 237 aaPredicted RBP2.58□□□□□ -2
SSR3-201ENST00000265044 LCE3EQ5T5B0 92 aa2.56□□□□□ -2
SSR3-201ENST00000265044 KRTAP4-11Q9BYQ6 195 aa2.56□□□□□ -2
SSR3-201ENST00000265044 KRTAP5-3Q6L8H2 238 aa2.53□□□□□ -2
SSR3-201ENST00000265044 KRTAP5-4Q6L8H1 288 aa2.43□□□□□ -2.02
SSR3-201ENST00000265044 KRTAP20-2Q3LI61 65 aa2.43□□□□□ -2.02
SSR3-201ENST00000265044 PRM1P04553 51 aa2.3□□□□□ -2.04
SSR3-201ENST00000265044 LCE1BQ5T7P3 118 aa2.3□□□□□ -2.04
SSR3-201ENST00000265044 GPR98Q8WXG9 6306 aa2.2□□□□□ -2.06
SSR3-201ENST00000265044 KRTAP5-2Q701N4 177 aa2.19□□□□□ -2.06
SSR3-201ENST00000265044 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
SSR3-201ENST00000265044 AHNAK2Q8IVF2 5795 aa2.09□□□□□ -2.08
SSR3-201ENST00000265044 LCE1EQ5T753 118 aa2.06□□□□□ -2.08
SSR3-201ENST00000265044 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
SSR3-201ENST00000265044 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.97□□□□□ -2.09
SSR3-201ENST00000265044 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
SSR3-201ENST00000265044 KRTAP5-1Q6L8H4 278 aa1.93□□□□□ -2.1
SSR3-201ENST00000265044 KRTAP5-8O75690 187 aa1.93□□□□□ -2.1
SSR3-201ENST00000265044 KRTAP5-10Q6L8G5 202 aa1.92□□□□□ -2.1
SSR3-201ENST00000265044 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
SSR3-201ENST00000265044 MUC19Q7Z5P9 8384 aa1.86□□□□□ -2.11
SSR3-201ENST00000265044 AHNAKQ09666 5890 aaKnown RBP1.79□□□□□ -2.12
SSR3-201ENST00000265044 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
SSR3-201ENST00000265044 LCE1FQ5T754 118 aa1.74□□□□□ -2.13
SSR3-201ENST00000265044 KRTAP5-11Q6L8G4 156 aa1.74□□□□□ -2.13
SSR3-201ENST00000265044 KRTAP21-2Q3LI59 83 aa1.7□□□□□ -2.14
SSR3-201ENST00000265044 PHGR1C9JFL3 82 aa1.43□□□□□ -2.18
SSR3-201ENST00000265044 KRTAP21-1Q3LI58 79 aa1.28□□□□□ -2.21
SSR3-201ENST00000265044 MUC16Q8WXI7 14507 aa0.9□□□□□ -2.26
Retrieved 77 of 20,778 RNA–protein pairs in 11.5 ms