RNA–Protein interactions for RNA: ENST00000265007.10

SOX30-201, Transcript of SRY-box 30, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SOX30, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30-201ENST00000265007 LOC100996750A0A140TA64 210 aa4.15□□□□□ -1.75
SOX30-201ENST00000265007 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
SOX30-201ENST00000265007 KRTAP12-4P60329 112 aa4.15□□□□□ -1.75
SOX30-201ENST00000265007 MT1LQ93083 61 aa4.12□□□□□ -1.75
SOX30-201ENST00000265007 DSTQ03001 7570 aaKnown RBP4.1□□□□□ -1.75
SOX30-201ENST00000265007 MT1EP04732 61 aa4.1□□□□□ -1.75
SOX30-201ENST00000265007 KRTAP4-3Q9BYR4 195 aa4.08□□□□□ -1.76
SOX30-201ENST00000265007 MT1GP13640 62 aa4.05□□□□□ -1.76
SOX30-201ENST00000265007 MACF1Q9UPN3 7388 aaKnown RBP4.03□□□□□ -1.76
SOX30-201ENST00000265007 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
SOX30-201ENST00000265007 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
SOX30-201ENST00000265007 SYNE1Q8NF91 8797 aaKnown RBP3.97□□□□□ -1.77
SOX30-201ENST00000265007 KRTAP4-9Q9BYQ8 210 aa3.92□□□□□ -1.78
SOX30-201ENST00000265007 SPRR2FQ96RM1 72 aa3.9□□□□□ -1.78
SOX30-201ENST00000265007 LCE3BQ5TA77 95 aa3.89□□□□□ -1.79
SOX30-201ENST00000265007 MDN1Q9NU22 5596 aa3.89□□□□□ -1.79
SOX30-201ENST00000265007 KRTAP19-3Q7Z4W3 81 aa3.87□□□□□ -1.79
SOX30-201ENST00000265007 MT1MQ8N339 61 aa3.85□□□□□ -1.79
SOX30-201ENST00000265007 KRTAP19-4Q3LI73 84 aa3.84□□□□□ -1.79
SOX30-201ENST00000265007 KRTAP9-2Q9BYQ4 174 aa3.82□□□□□ -1.8
SOX30-201ENST00000265007 KRTAP9-7A8MTY7 169 aa3.76□□□□□ -1.81
SOX30-201ENST00000265007 LCE5AQ5TCM9 118 aa3.74□□□□□ -1.81
SOX30-201ENST00000265007 PRM1P04553 51 aa3.73□□□□□ -1.81
SOX30-201ENST00000265007 LCE3DQ9BYE3 92 aa3.66□□□□□ -1.82
SOX30-201ENST00000265007 LCE3EQ5T5B0 92 aa3.62□□□□□ -1.83
SOX30-201ENST00000265007 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
SOX30-201ENST00000265007 KRTAP5-5Q701N2 237 aaPredicted RBP3.59□□□□□ -1.84
SOX30-201ENST00000265007 SPRR2EP22531 72 aa3.57□□□□□ -1.84
SOX30-201ENST00000265007 SPRR2BP35325 72 aa3.57□□□□□ -1.84
SOX30-201ENST00000265007 SPRR2AP35326 72 aa3.57□□□□□ -1.84
SOX30-201ENST00000265007 KRTAP6-1Q3LI64 71 aa3.57□□□□□ -1.84
SOX30-201ENST00000265007 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
SOX30-201ENST00000265007 MT1AP04731 61 aa3.52□□□□□ -1.85
SOX30-201ENST00000265007 KRTAP6-2Q3LI66 62 aa3.46□□□□□ -1.86
SOX30-201ENST00000265007 KRTAP9-6A0A140TA67 174 aa3.44□□□□□ -1.86
SOX30-201ENST00000265007 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
SOX30-201ENST00000265007 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.41□□□□□ -1.86
SOX30-201ENST00000265007 SPRR2DP22532 72 aa3.41□□□□□ -1.86
SOX30-201ENST00000265007 KRTAP2-2Q9BYT5 123 aa3.25□□□□□ -1.89
SOX30-201ENST00000265007 KRTAP9-4Q9BYQ2 154 aa3.22□□□□□ -1.89
SOX30-201ENST00000265007 NEBP20929 6669 aa3.19□□□□□ -1.9
SOX30-201ENST00000265007 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
SOX30-201ENST00000265007 MT4P47944 62 aa3.09□□□□□ -1.92
SOX30-201ENST00000265007 MT3P25713 68 aa3.07□□□□□ -1.92
SOX30-201ENST00000265007 KRTAP4-6Q9BYQ5 205 aa3.07□□□□□ -1.92
SOX30-201ENST00000265007 LCE1DQ5T752 114 aa3.02□□□□□ -1.93
SOX30-201ENST00000265007 KRTAP5-4Q6L8H1 288 aa3.01□□□□□ -1.93
SOX30-201ENST00000265007 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
SOX30-201ENST00000265007 KRTAP20-2Q3LI61 65 aa2.9□□□□□ -1.95
SOX30-201ENST00000265007 LCE4AQ5TA78 99 aa2.85□□□□□ -1.95
SOX30-201ENST00000265007 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.95
SOX30-201ENST00000265007 MUC19Q7Z5P9 8384 aa2.8□□□□□ -1.96
SOX30-201ENST00000265007 KRTAP5-2Q701N4 177 aa2.78□□□□□ -1.96
SOX30-201ENST00000265007 KRTAP20-1Q3LI63 56 aa2.75□□□□□ -1.97
SOX30-201ENST00000265007 MUC5ACP98088 5654 aa2.74□□□□□ -1.97
SOX30-201ENST00000265007 KRTAP5-3Q6L8H2 238 aa2.74□□□□□ -1.97
SOX30-201ENST00000265007 LCE1BQ5T7P3 118 aa2.65□□□□□ -1.99
SOX30-201ENST00000265007 KRTAP5-10Q6L8G5 202 aa2.54□□□□□ -2
SOX30-201ENST00000265007 LCE1FQ5T754 118 aa2.46□□□□□ -2.02
SOX30-201ENST00000265007 KRTAP5-1Q6L8H4 278 aa2.44□□□□□ -2.02
SOX30-201ENST00000265007 KRTAP4-2Q9BYR5 136 aa2.42□□□□□ -2.02
SOX30-201ENST00000265007 AHNAK2Q8IVF2 5795 aa2.38□□□□□ -2.03
SOX30-201ENST00000265007 LCE1CQ5T751 118 aa2.37□□□□□ -2.03
SOX30-201ENST00000265007 KRTAP5-8O75690 187 aa2.33□□□□□ -2.04
SOX30-201ENST00000265007 KRTAP4-12Q9BQ66 201 aa2.33□□□□□ -2.04
SOX30-201ENST00000265007 MUC5BQ9HC84 5762 aaPredicted RBP2.33□□□□□ -2.04
SOX30-201ENST00000265007 KRTAP4-4Q9BYR3 166 aa2.31□□□□□ -2.04
SOX30-201ENST00000265007 KRTAP9-9Q9BYP9 154 aa2.28□□□□□ -2.04
SOX30-201ENST00000265007 KRTAP21-2Q3LI59 83 aa2.23□□□□□ -2.05
SOX30-201ENST00000265007 KRTAP21-1Q3LI58 79 aa2.22□□□□□ -2.05
SOX30-201ENST00000265007 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
SOX30-201ENST00000265007 KRTAP5-7Q6L8G8 165 aa2.16□□□□□ -2.06
SOX30-201ENST00000265007 GPR98Q8WXG9 6306 aa2.09□□□□□ -2.07
SOX30-201ENST00000265007 KRTAP5-11Q6L8G4 156 aa2.03□□□□□ -2.08
SOX30-201ENST00000265007 PHGR1C9JFL3 82 aa1.79□□□□□ -2.12
SOX30-201ENST00000265007 AHNAKQ09666 5890 aaKnown RBP1.73□□□□□ -2.13
SOX30-201ENST00000265007 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 48.9 ms