RNA–Protein interactions for RNA: ENST00000264720.7

GTF3C2-201, Transcript of general transcription factor IIIC subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C2, Length 3,882 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-201ENST00000264720 MT1EP04732 61 aa3.73□□□□□ -1.81
GTF3C2-201ENST00000264720 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
GTF3C2-201ENST00000264720 SYNE1Q8NF91 8797 aaKnown RBP3.72□□□□□ -1.81
GTF3C2-201ENST00000264720 KRTAP9-6A8MVA2 160 aa3.7□□□□□ -1.82
GTF3C2-201ENST00000264720 MT1LQ93083 61 aa3.67□□□□□ -1.82
GTF3C2-201ENST00000264720 SPRR2FQ96RM1 72 aa3.65□□□□□ -1.82
GTF3C2-201ENST00000264720 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.64□□□□□ -1.83
GTF3C2-201ENST00000264720 KRTAP12-4P60329 112 aa3.61□□□□□ -1.83
GTF3C2-201ENST00000264720 KRTAP19-3Q7Z4W3 81 aa3.59□□□□□ -1.83
GTF3C2-201ENST00000264720 MT1GP13640 62 aa3.59□□□□□ -1.84
GTF3C2-201ENST00000264720 MACF1Q9UPN3 7388 aaKnown RBP3.56□□□□□ -1.84
GTF3C2-201ENST00000264720 KRTAP2-3P0C7H8 128 aa3.55□□□□□ -1.84
GTF3C2-201ENST00000264720 KRTAP2-4Q9BYR9 128 aa3.55□□□□□ -1.84
GTF3C2-201ENST00000264720 KRTAP2-1Q9BYU5 128 aa3.55□□□□□ -1.84
GTF3C2-201ENST00000264720 KRTAP5-9P26371 169 aa3.54□□□□□ -1.84
GTF3C2-201ENST00000264720 MT1MQ8N339 61 aa3.52□□□□□ -1.85
GTF3C2-201ENST00000264720 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
GTF3C2-201ENST00000264720 KRTAP6-3Q3LI67 103 aa3.49□□□□□ -1.85
GTF3C2-201ENST00000264720 MUC12Q9UKN1 5478 aa3.45□□□□□ -1.86
GTF3C2-201ENST00000264720 SPRR2EP22531 72 aa3.45□□□□□ -1.86
GTF3C2-201ENST00000264720 SPRR2BP35325 72 aa3.45□□□□□ -1.86
GTF3C2-201ENST00000264720 SPRR2AP35326 72 aa3.45□□□□□ -1.86
GTF3C2-201ENST00000264720 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
GTF3C2-201ENST00000264720 DSTQ03001 7570 aaKnown RBP3.44□□□□□ -1.86
GTF3C2-201ENST00000264720 LOC100996750A0A140TA64 210 aa3.43□□□□□ -1.86
GTF3C2-201ENST00000264720 SYNE2Q8WXH0 6885 aaKnown RBP3.42□□□□□ -1.86
GTF3C2-201ENST00000264720 KRTAP4-3Q9BYR4 195 aa3.42□□□□□ -1.86
GTF3C2-201ENST00000264720 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
GTF3C2-201ENST00000264720 KRTAP4-9Q9BYQ8 210 aa3.36□□□□□ -1.87
GTF3C2-201ENST00000264720 SPRR2DP22532 72 aa3.33□□□□□ -1.88
GTF3C2-201ENST00000264720 LCE3BQ5TA77 95 aa3.32□□□□□ -1.88
GTF3C2-201ENST00000264720 PRM1P04553 51 aa3.28□□□□□ -1.88
GTF3C2-201ENST00000264720 MDN1Q9NU22 5596 aa3.27□□□□□ -1.89
GTF3C2-201ENST00000264720 NEBP20929 6669 aa3.14□□□□□ -1.91
GTF3C2-201ENST00000264720 MT1AP04731 61 aa3.14□□□□□ -1.91
GTF3C2-201ENST00000264720 KRTAP2-2Q9BYT5 123 aa3.14□□□□□ -1.91
GTF3C2-201ENST00000264720 KRTAP5-5Q701N2 237 aaPredicted RBP3.12□□□□□ -1.91
GTF3C2-201ENST00000264720 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
GTF3C2-201ENST00000264720 LCE3DQ9BYE3 92 aa3.1□□□□□ -1.91
GTF3C2-201ENST00000264720 KRTAP6-1Q3LI64 71 aa3.08□□□□□ -1.92
GTF3C2-201ENST00000264720 LCE3EQ5T5B0 92 aa3.07□□□□□ -1.92
GTF3C2-201ENST00000264720 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
GTF3C2-201ENST00000264720 KRTAP5-4Q6L8H1 288 aa2.97□□□□□ -1.93
GTF3C2-201ENST00000264720 KRTAP9-4Q9BYQ2 154 aa2.97□□□□□ -1.93
GTF3C2-201ENST00000264720 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
GTF3C2-201ENST00000264720 KRTAP6-2Q3LI66 62 aa2.94□□□□□ -1.94
GTF3C2-201ENST00000264720 MT4P47944 62 aa2.92□□□□□ -1.94
GTF3C2-201ENST00000264720 GPR98Q8WXG9 6306 aa2.9□□□□□ -1.94
GTF3C2-201ENST00000264720 MT3P25713 68 aa2.87□□□□□ -1.95
GTF3C2-201ENST00000264720 LCE1DQ5T752 114 aa2.87□□□□□ -1.95
GTF3C2-201ENST00000264720 KRTAP4-6Q9BYQ5 205 aa2.82□□□□□ -1.96
GTF3C2-201ENST00000264720 KRTAP20-2Q3LI61 65 aa2.79□□□□□ -1.96
GTF3C2-201ENST00000264720 KRTAP5-2Q701N4 177 aa2.7□□□□□ -1.98
GTF3C2-201ENST00000264720 HMCN1Q96RW7 5635 aa2.66□□□□□ -1.98
GTF3C2-201ENST00000264720 KRTAP5-3Q6L8H2 238 aa2.66□□□□□ -1.98
GTF3C2-201ENST00000264720 LCE1FQ5T754 118 aa2.52□□□□□ -2.01
GTF3C2-201ENST00000264720 KRTAP4-11Q9BYQ6 195 aa2.51□□□□□ -2.01
GTF3C2-201ENST00000264720 KRTAP9-9Q9BYP9 154 aa2.36□□□□□ -2.03
GTF3C2-201ENST00000264720 AHNAK2Q8IVF2 5795 aa2.35□□□□□ -2.03
GTF3C2-201ENST00000264720 LCE1BQ5T7P3 118 aa2.32□□□□□ -2.04
GTF3C2-201ENST00000264720 KRTAP5-1Q6L8H4 278 aa2.32□□□□□ -2.04
GTF3C2-201ENST00000264720 KRTAP5-8O75690 187 aa2.29□□□□□ -2.04
GTF3C2-201ENST00000264720 KRTAP5-10Q6L8G5 202 aa2.28□□□□□ -2.04
GTF3C2-201ENST00000264720 LCE1CQ5T751 118 aa2.27□□□□□ -2.05
GTF3C2-201ENST00000264720 KRTAP4-2Q9BYR5 136 aa2.25□□□□□ -2.05
GTF3C2-201ENST00000264720 KRTAP5-7Q6L8G8 165 aa2.24□□□□□ -2.05
GTF3C2-201ENST00000264720 MUC5ACP98088 5654 aa2.22□□□□□ -2.05
GTF3C2-201ENST00000264720 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.12□□□□□ -2.07
GTF3C2-201ENST00000264720 AHNAKQ09666 5890 aaKnown RBP2.11□□□□□ -2.07
GTF3C2-201ENST00000264720 KRTAP4-4Q9BYR3 166 aa2.01□□□□□ -2.09
GTF3C2-201ENST00000264720 KRTAP5-11Q6L8G4 156 aa2□□□□□ -2.09
GTF3C2-201ENST00000264720 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
GTF3C2-201ENST00000264720 MUC5BQ9HC84 5762 aaPredicted RBP1.96□□□□□ -2.1
GTF3C2-201ENST00000264720 KRTAP4-12Q9BQ66 201 aa1.87□□□□□ -2.11
GTF3C2-201ENST00000264720 KRTAP21-1Q3LI58 79 aa1.83□□□□□ -2.12
GTF3C2-201ENST00000264720 PHGR1C9JFL3 82 aa1.71□□□□□ -2.14
GTF3C2-201ENST00000264720 MUC16Q8WXI7 14507 aa1.11□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 72.6 ms