RNA–Protein interactions for RNA: ENST00000264637.8

THRA-201, Transcript of thyroid hormone receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene THRA, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THRA-201ENST00000264637 LCE2DQ5TA82 110 aaPredicted RBP7.6□□□□□ -1.19
THRA-201ENST00000264637 LOC100996750A0A140TA64 210 aa7.52□□□□□ -1.21
THRA-201ENST00000264637 KRTAP4-3Q9BYR4 195 aa7.51□□□□□ -1.21
THRA-201ENST00000264637 FCGBPQ9Y6R7 5405 aaPredicted RBP7.46□□□□□ -1.22
THRA-201ENST00000264637 MUC12Q9UKN1 5478 aa7.43□□□□□ -1.22
THRA-201ENST00000264637 KRTAP19-6Q3LI70 58 aa7.4□□□□□ -1.22
THRA-201ENST00000264637 MT1GP13640 62 aa7.39□□□□□ -1.23
THRA-201ENST00000264637 KRTAP9-6A0A140TA67 174 aa7.37□□□□□ -1.23
THRA-201ENST00000264637 CRCT1Q9UGL9 99 aa7.3□□□□□ -1.24
THRA-201ENST00000264637 MT1MQ8N339 61 aa7.26□□□□□ -1.25
THRA-201ENST00000264637 KRTAP19-3Q7Z4W3 81 aa7.21□□□□□ -1.26
THRA-201ENST00000264637 DSTQ03001 7570 aaKnown RBP7.17□□□□□ -1.26
THRA-201ENST00000264637 KRTAP12-4P60329 112 aa7.04□□□□□ -1.28
THRA-201ENST00000264637 LCE5AQ5TCM9 118 aa6.94□□□□□ -1.3
THRA-201ENST00000264637 SPRR2FQ96RM1 72 aa6.91□□□□□ -1.3
THRA-201ENST00000264637 LCE3BQ5TA77 95 aa6.88□□□□□ -1.31
THRA-201ENST00000264637 KRTAP4-9Q9BYQ8 210 aa6.84□□□□□ -1.31
THRA-201ENST00000264637 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
THRA-201ENST00000264637 MACF1Q9UPN3 7388 aaKnown RBP6.78□□□□□ -1.32
THRA-201ENST00000264637 SYNE1Q8NF91 8797 aaKnown RBP6.72□□□□□ -1.33
THRA-201ENST00000264637 KRTAP6-1Q3LI64 71 aa6.68□□□□□ -1.34
THRA-201ENST00000264637 KRTAP9-7A8MTY7 169 aa6.65□□□□□ -1.34
THRA-201ENST00000264637 MDN1Q9NU22 5596 aa6.64□□□□□ -1.35
THRA-201ENST00000264637 SYNE2Q8WXH0 6885 aaKnown RBP6.58□□□□□ -1.36
THRA-201ENST00000264637 MT1AP04731 61 aa6.57□□□□□ -1.36
THRA-201ENST00000264637 LCE3DQ9BYE3 92 aa6.47□□□□□ -1.37
THRA-201ENST00000264637 KRTAP6-3Q3LI67 103 aa6.42□□□□□ -1.38
THRA-201ENST00000264637 LCE3EQ5T5B0 92 aa6.39□□□□□ -1.39
THRA-201ENST00000264637 LCE1AQ5T7P2 110 aa6.37□□□□□ -1.39
THRA-201ENST00000264637 KRTAP5-5Q701N2 237 aaPredicted RBP6.37□□□□□ -1.39
THRA-201ENST00000264637 PRM1P04553 51 aa6.27□□□□□ -1.41
THRA-201ENST00000264637 KRTAP5-9P26371 169 aa6.21□□□□□ -1.42
THRA-201ENST00000264637 SPRR2EP22531 72 aa6.19□□□□□ -1.42
THRA-201ENST00000264637 SPRR2BP35325 72 aa6.19□□□□□ -1.42
THRA-201ENST00000264637 SPRR2AP35326 72 aa6.19□□□□□ -1.42
THRA-201ENST00000264637 OBSCNQ5VST9 7968 aa6.13□□□□□ -1.43
THRA-201ENST00000264637 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
THRA-201ENST00000264637 NEBP20929 6669 aa6.11□□□□□ -1.43
THRA-201ENST00000264637 KRTAP6-2Q3LI66 62 aa6.03□□□□□ -1.44
THRA-201ENST00000264637 SPRR2DP22532 72 aa5.89□□□□□ -1.47
THRA-201ENST00000264637 KRTAP20-1Q3LI63 56 aa5.83□□□□□ -1.48
THRA-201ENST00000264637 MT3P25713 68 aa5.82□□□□□ -1.48
THRA-201ENST00000264637 KRTAP2-2Q9BYT5 123 aa5.61□□□□□ -1.51
THRA-201ENST00000264637 KRTAP5-4Q6L8H1 288 aa5.44□□□□□ -1.54
THRA-201ENST00000264637 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
THRA-201ENST00000264637 MT4P47944 62 aa5.29□□□□□ -1.56
THRA-201ENST00000264637 KRTAP20-2Q3LI61 65 aa5.16□□□□□ -1.58
THRA-201ENST00000264637 KRTAP5-2Q701N4 177 aa5.14□□□□□ -1.59
THRA-201ENST00000264637 MUC5ACP98088 5654 aa5.07□□□□□ -1.6
THRA-201ENST00000264637 HMCN1Q96RW7 5635 aa5.06□□□□□ -1.6
THRA-201ENST00000264637 LCE4AQ5TA78 99 aa5.05□□□□□ -1.6
THRA-201ENST00000264637 LCE1DQ5T752 114 aa5.01□□□□□ -1.61
THRA-201ENST00000264637 KRTAP5-3Q6L8H2 238 aa4.88□□□□□ -1.63
THRA-201ENST00000264637 LCE1EQ5T753 118 aa4.86□□□□□ -1.63
THRA-201ENST00000264637 LCE1BQ5T7P3 118 aa4.78□□□□□ -1.64
THRA-201ENST00000264637 KRTAP4-11Q9BYQ6 195 aa4.75□□□□□ -1.65
THRA-201ENST00000264637 GPR98Q8WXG9 6306 aa4.72□□□□□ -1.65
THRA-201ENST00000264637 KRTAP5-10Q6L8G5 202 aa4.72□□□□□ -1.65
THRA-201ENST00000264637 AHNAK2Q8IVF2 5795 aa4.65□□□□□ -1.66
THRA-201ENST00000264637 KRTAP5-1Q6L8H4 278 aa4.6□□□□□ -1.67
THRA-201ENST00000264637 KRTAP4-2Q9BYR5 136 aa4.5□□□□□ -1.69
THRA-201ENST00000264637 LCE1CQ5T751 118 aa4.43□□□□□ -1.7
THRA-201ENST00000264637 KRTAP5-7Q6L8G8 165 aa4.39□□□□□ -1.71
THRA-201ENST00000264637 KRTAP21-2Q3LI59 83 aa4.28□□□□□ -1.72
THRA-201ENST00000264637 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.17□□□□□ -1.74
THRA-201ENST00000264637 KRTAP5-8O75690 187 aa4.14□□□□□ -1.75
THRA-201ENST00000264637 KRTAP21-1Q3LI58 79 aa4.03□□□□□ -1.76
THRA-201ENST00000264637 KRTAP4-4Q9BYR3 166 aa4.03□□□□□ -1.76
THRA-201ENST00000264637 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
THRA-201ENST00000264637 KRTAP9-9Q9BYP9 154 aa3.84□□□□□ -1.79
THRA-201ENST00000264637 MUC5BQ9HC84 5762 aaPredicted RBP3.82□□□□□ -1.8
THRA-201ENST00000264637 KRTAP5-11Q6L8G4 156 aa3.77□□□□□ -1.81
THRA-201ENST00000264637 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
THRA-201ENST00000264637 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
THRA-201ENST00000264637 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
THRA-201ENST00000264637 PHGR1C9JFL3 82 aa3.29□□□□□ -1.88
THRA-201ENST00000264637 MUC16Q8WXI7 14507 aa2.25□□□□□ -2.05
Retrieved 77 of 20,778 RNA–protein pairs in 12 ms