RNA–Protein interactions for RNA: ENST00000264001.8

CKLF-201, Transcript of chemokine like factor, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CKLF, Length 669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKLF-201ENST00000264001 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
CKLF-201ENST00000264001 LINC01558Q9Y6Z2 57 aa7.1□□□□□ -1.27
CKLF-201ENST00000264001 MT4P47944 62 aa7.05□□□□□ -1.28
CKLF-201ENST00000264001 KRTAP4-3Q9BYR4 195 aa7.01□□□□□ -1.29
CKLF-201ENST00000264001 HMCN1Q96RW7 5635 aa6.99□□□□□ -1.29
CKLF-201ENST00000264001 UQCR11O14957 56 aa6.94□□□□□ -1.3
CKLF-201ENST00000264001 TMEM258P61165 79 aa6.94□□□□□ -1.3
CKLF-201ENST00000264001 KRTAP12-3P60328 96 aa6.9□□□□□ -1.3
CKLF-201ENST00000264001 KRTAP5-4Q6L8H1 288 aa6.89□□□□□ -1.31
CKLF-201ENST00000264001 AHNAK2Q8IVF2 5795 aa6.85□□□□□ -1.31
CKLF-201ENST00000264001 KRTAP4-7Q9BYR0 210 aa6.84□□□□□ -1.31
CKLF-201ENST00000264001 KRTAP5-10Q6L8G5 202 aa6.8□□□□□ -1.32
CKLF-201ENST00000264001 MIR22HGQ0VDD5 57 aa6.78□□□□□ -1.32
CKLF-201ENST00000264001 KRTAP25-1Q3LHN0 102 aa6.73□□□□□ -1.33
CKLF-201ENST00000264001 K7ERS5 55 aa6.66□□□□□ -1.34
CKLF-201ENST00000264001 PSPHP1O15172 72 aa6.6□□□□□ -1.35
CKLF-201ENST00000264001 V9GYY9 64 aa6.6□□□□□ -1.35
CKLF-201ENST00000264001 KRTAP5-7Q6L8G8 165 aa6.58□□□□□ -1.36
CKLF-201ENST00000264001 KRTAP5-3Q6L8H2 238 aa6.58□□□□□ -1.36
CKLF-201ENST00000264001 KRTAP5-5Q701N2 237 aaPredicted RBP6.58□□□□□ -1.36
CKLF-201ENST00000264001 Q1T7F1 81 aa6.54□□□□□ -1.36
CKLF-201ENST00000264001 KRTAP20-2Q3LI61 65 aa6.54□□□□□ -1.36
CKLF-201ENST00000264001 KRTAP19-4Q3LI73 84 aa6.48□□□□□ -1.37
CKLF-201ENST00000264001 SPRR5A0A1B0GTR4 108 aa6.47□□□□□ -1.37
CKLF-201ENST00000264001 KRTAP23-1A1A580 65 aa6.47□□□□□ -1.37
CKLF-201ENST00000264001 KRTAP12-4P60329 112 aa6.42□□□□□ -1.38
CKLF-201ENST00000264001 KRTAP15-1Q3LI76 137 aa6.42□□□□□ -1.38
CKLF-201ENST00000264001 A6NED7 52 aa6.37□□□□□ -1.39
CKLF-201ENST00000264001 LCE3CQ5T5A8 94 aa6.34□□□□□ -1.39
CKLF-201ENST00000264001 SYNE1Q8NF91 8797 aaKnown RBP6.32□□□□□ -1.4
CKLF-201ENST00000264001 CDC42SE1Q9NRR8 79 aa6.3□□□□□ -1.4
CKLF-201ENST00000264001 ROMO1P60602 79 aa6.19□□□□□ -1.42
CKLF-201ENST00000264001 RPS28P62857 69 aaKnown RBP6.12□□□□□ -1.43
CKLF-201ENST00000264001 MT1AP04731 61 aa6.11□□□□□ -1.43
CKLF-201ENST00000264001 KRTAP6-1Q3LI64 71 aa6.09□□□□□ -1.43
CKLF-201ENST00000264001 KRTAP4-12Q9BQ66 201 aa6.06□□□□□ -1.44
CKLF-201ENST00000264001 KRTAP9-9Q9BYP9 154 aa6.05□□□□□ -1.44
CKLF-201ENST00000264001 KRTAP9-4Q9BYQ2 154 aa6.05□□□□□ -1.44
CKLF-201ENST00000264001 KRTAP4-11Q9BYQ6 195 aa6.03□□□□□ -1.44
CKLF-201ENST00000264001 KRTAP5-2Q701N4 177 aa6.01□□□□□ -1.45
CKLF-201ENST00000264001 KRTAP9-6A8MVA2 160 aa6□□□□□ -1.45
CKLF-201ENST00000264001 PCP4P48539 62 aa5.88□□□□□ -1.47
CKLF-201ENST00000264001 KRTAP5-8O75690 187 aa5.83□□□□□ -1.48
CKLF-201ENST00000264001 KRTAP6-2Q3LI66 62 aa5.82□□□□□ -1.48
CKLF-201ENST00000264001 MUC5ACP98088 5654 aa5.69□□□□□ -1.5
CKLF-201ENST00000264001 MUC5BQ9HC84 5762 aaPredicted RBP5.64□□□□□ -1.51
CKLF-201ENST00000264001 AHNAKQ09666 5890 aaKnown RBP5.64□□□□□ -1.51
CKLF-201ENST00000264001 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
CKLF-201ENST00000264001 MT3P25713 68 aa5.59□□□□□ -1.51
CKLF-201ENST00000264001 KRTAP4-2Q9BYR5 136 aa5.57□□□□□ -1.52
CKLF-201ENST00000264001 KRTAP5-1Q6L8H4 278 aa5.41□□□□□ -1.54
CKLF-201ENST00000264001 BRK1Q8WUW1 75 aa5.33□□□□□ -1.56
CKLF-201ENST00000264001 LCE1EQ5T753 118 aa5.13□□□□□ -1.59
CKLF-201ENST00000264001 PMAIP1Q13794 54 aa5□□□□□ -1.61
CKLF-201ENST00000264001 PRAC1Q96KF2 57 aa4.89□□□□□ -1.63
CKLF-201ENST00000264001 H3BS24 57 aa4.87□□□□□ -1.63
CKLF-201ENST00000264001 LCE1BQ5T7P3 118 aa4.87□□□□□ -1.63
CKLF-201ENST00000264001 LCE1CQ5T751 118 aa4.77□□□□□ -1.65
CKLF-201ENST00000264001 LCE3DQ9BYE3 92 aa4.55□□□□□ -1.68
CKLF-201ENST00000264001 PRO0628Q9UI54 55 aa4.47□□□□□ -1.69
CKLF-201ENST00000264001 KRTAP5-11Q6L8G4 156 aa4.34□□□□□ -1.71
CKLF-201ENST00000264001 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
CKLF-201ENST00000264001 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
CKLF-201ENST00000264001 LCE3EQ5T5B0 92 aa4.27□□□□□ -1.73
CKLF-201ENST00000264001 LCE1FQ5T754 118 aa4.27□□□□□ -1.73
CKLF-201ENST00000264001 SVIPQ8NHG7 77 aa4.2□□□□□ -1.74
CKLF-201ENST00000264001 LUZP6Q538Z0 58 aa4.12□□□□□ -1.75
CKLF-201ENST00000264001 KRTAP21-2Q3LI59 83 aa4.01□□□□□ -1.77
CKLF-201ENST00000264001 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
CKLF-201ENST00000264001 KRTAP4-4Q9BYR3 166 aa3.7□□□□□ -1.82
CKLF-201ENST00000264001 MUC19Q7Z5P9 8384 aa3.47□□□□□ -1.85
CKLF-201ENST00000264001 PRM1P04553 51 aa3.17□□□□□ -1.9
CKLF-201ENST00000264001 NDUFAF8A1L188 74 aa3.13□□□□□ -1.91
CKLF-201ENST00000264001 KRTAP21-1Q3LI58 79 aa3.04□□□□□ -1.92
CKLF-201ENST00000264001 MUC16Q8WXI7 14507 aa2.53□□□□□ -2.01
CKLF-201ENST00000264001 A0A0A0MQY5 61 aa2.51□□□□□ -2.01
CKLF-201ENST00000264001 INE1O15225 51 aa2.46□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 56.2 ms