RNA–Protein interactions for RNA: ENST00000262949.7

HMG20B-201, Transcript of high mobility group 20B, humanhuman

TSL 5

Gene HMG20B, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-201ENST00000262949 HMCN1Q96RW7 5635 aa8.06□□□□□ -1.12
HMG20B-201ENST00000262949 KRTAP4-3Q9BYR4 195 aa7.99□□□□□ -1.13
HMG20B-201ENST00000262949 TMEM258P61165 79 aa7.96□□□□□ -1.14
HMG20B-201ENST00000262949 KRTAP5-4Q6L8H1 288 aa7.94□□□□□ -1.14
HMG20B-201ENST00000262949 PRR15LQ9BU68 103 aa7.94□□□□□ -1.14
HMG20B-201ENST00000262949 ATP5EP56381 51 aaPredicted RBP7.92□□□□□ -1.14
HMG20B-201ENST00000262949 KRTAP4-6Q9BYQ5 205 aa7.84□□□□□ -1.15
HMG20B-201ENST00000262949 AHNAK2Q8IVF2 5795 aa7.84□□□□□ -1.15
HMG20B-201ENST00000262949 KRTAP12-3P60328 96 aa7.81□□□□□ -1.16
HMG20B-201ENST00000262949 KRTAP5-10Q6L8G5 202 aa7.76□□□□□ -1.17
HMG20B-201ENST00000262949 KRTAP4-7Q9BYR0 210 aa7.74□□□□□ -1.17
HMG20B-201ENST00000262949 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
HMG20B-201ENST00000262949 UQCR11O14957 56 aa7.63□□□□□ -1.19
HMG20B-201ENST00000262949 KRTAP20-2Q3LI61 65 aa7.54□□□□□ -1.2
HMG20B-201ENST00000262949 KRTAP5-3Q6L8H2 238 aa7.54□□□□□ -1.2
HMG20B-201ENST00000262949 KRTAP25-1Q3LHN0 102 aa7.52□□□□□ -1.21
HMG20B-201ENST00000262949 KRTAP5-7Q6L8G8 165 aa7.51□□□□□ -1.21
HMG20B-201ENST00000262949 SPRR5A0A1B0GTR4 108 aa7.5□□□□□ -1.21
HMG20B-201ENST00000262949 KRTAP12-4P60329 112 aa7.5□□□□□ -1.21
HMG20B-201ENST00000262949 RPS28P62857 69 aaKnown RBP7.5□□□□□ -1.21
HMG20B-201ENST00000262949 KRTAP5-5Q701N2 237 aaPredicted RBP7.5□□□□□ -1.21
HMG20B-201ENST00000262949 K7ERS5 55 aa7.42□□□□□ -1.22
HMG20B-201ENST00000262949 MIR22HGQ0VDD5 57 aa7.42□□□□□ -1.22
HMG20B-201ENST00000262949 Q1T7F1 81 aa7.39□□□□□ -1.23
HMG20B-201ENST00000262949 KRTAP19-4Q3LI73 84 aa7.39□□□□□ -1.23
HMG20B-201ENST00000262949 V9GYY9 64 aa7.39□□□□□ -1.23
HMG20B-201ENST00000262949 PSPHP1O15172 72 aa7.36□□□□□ -1.23
HMG20B-201ENST00000262949 LOC100996750A0A140TA64 210 aa7.35□□□□□ -1.23
HMG20B-201ENST00000262949 SYNE1Q8NF91 8797 aaKnown RBP7.26□□□□□ -1.25
HMG20B-201ENST00000262949 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
HMG20B-201ENST00000262949 KRTAP15-1Q3LI76 137 aa7.21□□□□□ -1.26
HMG20B-201ENST00000262949 LCE3CQ5T5A8 94 aa7.15□□□□□ -1.26
HMG20B-201ENST00000262949 A6NED7 52 aa7.12□□□□□ -1.27
HMG20B-201ENST00000262949 MT1AP04731 61 aa6.96□□□□□ -1.3
HMG20B-201ENST00000262949 KRTAP4-11Q9BYQ6 195 aa6.96□□□□□ -1.3
HMG20B-201ENST00000262949 CDC42SE1Q9NRR8 79 aa6.93□□□□□ -1.3
HMG20B-201ENST00000262949 KRTAP6-1Q3LI64 71 aa6.92□□□□□ -1.3
HMG20B-201ENST00000262949 KRTAP5-2Q701N4 177 aa6.91□□□□□ -1.3
HMG20B-201ENST00000262949 BRK1Q8WUW1 75 aa6.79□□□□□ -1.32
HMG20B-201ENST00000262949 ROMO1P60602 79 aa6.78□□□□□ -1.32
HMG20B-201ENST00000262949 KRTAP9-4Q9BYQ2 154 aa6.76□□□□□ -1.33
HMG20B-201ENST00000262949 KRTAP5-8O75690 187 aa6.7□□□□□ -1.34
HMG20B-201ENST00000262949 KRTAP6-2Q3LI66 62 aa6.68□□□□□ -1.34
HMG20B-201ENST00000262949 KRTAP9-6A8MVA2 160 aa6.67□□□□□ -1.34
HMG20B-201ENST00000262949 OBSCNQ5VST9 7968 aa6.54□□□□□ -1.36
HMG20B-201ENST00000262949 MUC5BQ9HC84 5762 aaPredicted RBP6.52□□□□□ -1.37
HMG20B-201ENST00000262949 AHNAKQ09666 5890 aaKnown RBP6.5□□□□□ -1.37
HMG20B-201ENST00000262949 MUC5ACP98088 5654 aa6.5□□□□□ -1.37
HMG20B-201ENST00000262949 KRTAP9-9Q9BYP9 154 aa6.48□□□□□ -1.37
HMG20B-201ENST00000262949 MT3P25713 68 aa6.42□□□□□ -1.38
HMG20B-201ENST00000262949 PRO0628Q9UI54 55 aa6.39□□□□□ -1.39
HMG20B-201ENST00000262949 PMAIP1Q13794 54 aa6.38□□□□□ -1.39
HMG20B-201ENST00000262949 KRTAP5-1Q6L8H4 278 aa6.24□□□□□ -1.41
HMG20B-201ENST00000262949 PRAC1Q96KF2 57 aa6.08□□□□□ -1.44
HMG20B-201ENST00000262949 KTN1-AS1Q86SY8 53 aa5.98□□□□□ -1.45
HMG20B-201ENST00000262949 LCE1EQ5T753 118 aa5.94□□□□□ -1.46
HMG20B-201ENST00000262949 SVIPQ8NHG7 77 aa5.73□□□□□ -1.49
HMG20B-201ENST00000262949 LCE1BQ5T7P3 118 aa5.64□□□□□ -1.51
HMG20B-201ENST00000262949 KRTAP4-2Q9BYR5 136 aa5.58□□□□□ -1.52
HMG20B-201ENST00000262949 LCE1CQ5T751 118 aa5.51□□□□□ -1.53
HMG20B-201ENST00000262949 KRTAP4-12Q9BQ66 201 aa5.18□□□□□ -1.58
HMG20B-201ENST00000262949 LCE3DQ9BYE3 92 aa5.13□□□□□ -1.59
HMG20B-201ENST00000262949 KRTAP5-11Q6L8G4 156 aa4.99□□□□□ -1.61
HMG20B-201ENST00000262949 LCE1FQ5T754 118 aa4.95□□□□□ -1.62
HMG20B-201ENST00000262949 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.95□□□□□ -1.62
HMG20B-201ENST00000262949 LUZP6Q538Z0 58 aa4.94□□□□□ -1.62
HMG20B-201ENST00000262949 LCE3EQ5T5B0 92 aa4.78□□□□□ -1.64
HMG20B-201ENST00000262949 NDUFAF8A1L188 74 aa4.62□□□□□ -1.67
HMG20B-201ENST00000262949 PHGR1C9JFL3 82 aa4.58□□□□□ -1.68
HMG20B-201ENST00000262949 KRTAP21-2Q3LI59 83 aa4.55□□□□□ -1.68
HMG20B-201ENST00000262949 KRTAP4-4Q9BYR3 166 aa4.22□□□□□ -1.73
HMG20B-201ENST00000262949 MUC19Q7Z5P9 8384 aa4.05□□□□□ -1.76
HMG20B-201ENST00000262949 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
HMG20B-201ENST00000262949 H3BS24 57 aa3.86□□□□□ -1.79
HMG20B-201ENST00000262949 INE1O15225 51 aa3.73□□□□□ -1.81
HMG20B-201ENST00000262949 KRTAP21-1Q3LI58 79 aa3.49□□□□□ -1.85
HMG20B-201ENST00000262949 PRM1P04553 51 aa3.42□□□□□ -1.86
HMG20B-201ENST00000262949 MUC16Q8WXI7 14507 aa2.91□□□□□ -1.94
Retrieved 78 of 20,778 RNA–protein pairs in 13.1 ms