RNA–Protein interactions for RNA: ENST00000257765.9

KHDC1-201, Transcript of KH domain containing 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene KHDC1, Length 1,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KHDC1-201ENST00000257765 KRTAP4-7Q9BYR0 210 aa6.19□□□□□ -1.42
KHDC1-201ENST00000257765 A8MU10 97 aa6.18□□□□□ -1.42
KHDC1-201ENST00000257765 KRTAP20-2Q3LI61 65 aa6.17□□□□□ -1.42
KHDC1-201ENST00000257765 A0A1B0GU69 56 aa6.13□□□□□ -1.43
KHDC1-201ENST00000257765 SPRR5A0A1B0GTR4 108 aa6.1□□□□□ -1.43
KHDC1-201ENST00000257765 KRTAP12-3P60328 96 aa6.1□□□□□ -1.43
KHDC1-201ENST00000257765 KRTAP5-5Q701N2 237 aaPredicted RBP6.09□□□□□ -1.43
KHDC1-201ENST00000257765 H7BZZ5 65 aa6.03□□□□□ -1.44
KHDC1-201ENST00000257765 KRTAP12-4P60329 112 aa6.03□□□□□ -1.44
KHDC1-201ENST00000257765 COX7CP15954 63 aa6.01□□□□□ -1.45
KHDC1-201ENST00000257765 SYNE1Q8NF91 8797 aaKnown RBP5.92□□□□□ -1.46
KHDC1-201ENST00000257765 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
KHDC1-201ENST00000257765 PRR15LQ9BU68 103 aa5.84□□□□□ -1.47
KHDC1-201ENST00000257765 KRTAP25-1Q3LHN0 102 aa5.72□□□□□ -1.49
KHDC1-201ENST00000257765 KRTAP19-4Q3LI73 84 aa5.72□□□□□ -1.49
KHDC1-201ENST00000257765 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
KHDC1-201ENST00000257765 LINC01558Q9Y6Z2 57 aa5.68□□□□□ -1.5
KHDC1-201ENST00000257765 KRTAP5-2Q701N4 177 aa5.64□□□□□ -1.51
KHDC1-201ENST00000257765 UQCR11O14957 56 aa5.63□□□□□ -1.51
KHDC1-201ENST00000257765 ANAPC13Q9BS18 74 aa5.59□□□□□ -1.51
KHDC1-201ENST00000257765 ATP5EP56381 51 aaPredicted RBP5.58□□□□□ -1.52
KHDC1-201ENST00000257765 KRTAP15-1Q3LI76 137 aa5.57□□□□□ -1.52
KHDC1-201ENST00000257765 LCE3CQ5T5A8 94 aa5.57□□□□□ -1.52
KHDC1-201ENST00000257765 MT1AP04731 61 aa5.56□□□□□ -1.52
KHDC1-201ENST00000257765 KRTAP6-1Q3LI64 71 aa5.55□□□□□ -1.52
KHDC1-201ENST00000257765 KRTAP5-8O75690 187 aa5.54□□□□□ -1.52
KHDC1-201ENST00000257765 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
KHDC1-201ENST00000257765 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
KHDC1-201ENST00000257765 MUC5ACP98088 5654 aa5.47□□□□□ -1.53
KHDC1-201ENST00000257765 AHNAKQ09666 5890 aaKnown RBP5.46□□□□□ -1.54
KHDC1-201ENST00000257765 MIR22HGQ0VDD5 57 aa5.46□□□□□ -1.54
KHDC1-201ENST00000257765 K7ERS5 55 aa5.45□□□□□ -1.54
KHDC1-201ENST00000257765 MUC5BQ9HC84 5762 aaPredicted RBP5.44□□□□□ -1.54
KHDC1-201ENST00000257765 KRTAP9-4Q9BYQ2 154 aa5.4□□□□□ -1.54
KHDC1-201ENST00000257765 OBSCNQ5VST9 7968 aa5.37□□□□□ -1.55
KHDC1-201ENST00000257765 KRTAP6-2Q3LI66 62 aa5.37□□□□□ -1.55
KHDC1-201ENST00000257765 KRTAP9-9Q9BYP9 154 aa5.33□□□□□ -1.56
KHDC1-201ENST00000257765 TMEM258P61165 79 aa5.27□□□□□ -1.57
KHDC1-201ENST00000257765 KRTAP9-6A8MVA2 160 aa5.26□□□□□ -1.57
KHDC1-201ENST00000257765 PSPHP1O15172 72 aa5.13□□□□□ -1.59
KHDC1-201ENST00000257765 KRTAP5-1Q6L8H4 278 aa5.12□□□□□ -1.59
KHDC1-201ENST00000257765 RPS28P62857 69 aaKnown RBP5.11□□□□□ -1.59
KHDC1-201ENST00000257765 MT3P25713 68 aa5.1□□□□□ -1.59
KHDC1-201ENST00000257765 CDC42SE1Q9NRR8 79 aa5.1□□□□□ -1.59
KHDC1-201ENST00000257765 V9GYY9 64 aa5.08□□□□□ -1.6
KHDC1-201ENST00000257765 Q1T7F1 81 aa5.07□□□□□ -1.6
KHDC1-201ENST00000257765 ROMO1P60602 79 aa4.99□□□□□ -1.61
KHDC1-201ENST00000257765 A6NED7 52 aa4.95□□□□□ -1.62
KHDC1-201ENST00000257765 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
KHDC1-201ENST00000257765 KRTAP4-12Q9BQ66 201 aa4.55□□□□□ -1.68
KHDC1-201ENST00000257765 KRTAP4-2Q9BYR5 136 aa4.55□□□□□ -1.68
KHDC1-201ENST00000257765 LCE1BQ5T7P3 118 aa4.53□□□□□ -1.68
KHDC1-201ENST00000257765 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
KHDC1-201ENST00000257765 SVIPQ8NHG7 77 aa4.38□□□□□ -1.71
KHDC1-201ENST00000257765 H3BS24 57 aa4.23□□□□□ -1.73
KHDC1-201ENST00000257765 PCP4P48539 62 aa4.19□□□□□ -1.74
KHDC1-201ENST00000257765 KRTAP5-11Q6L8G4 156 aa4.06□□□□□ -1.76
KHDC1-201ENST00000257765 LCE1FQ5T754 118 aa4.02□□□□□ -1.77
KHDC1-201ENST00000257765 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.99□□□□□ -1.77
KHDC1-201ENST00000257765 LCE3DQ9BYE3 92 aa3.94□□□□□ -1.78
KHDC1-201ENST00000257765 PHGR1C9JFL3 82 aa3.82□□□□□ -1.8
KHDC1-201ENST00000257765 BRK1Q8WUW1 75 aa3.75□□□□□ -1.81
KHDC1-201ENST00000257765 KRTAP21-2Q3LI59 83 aa3.65□□□□□ -1.83
KHDC1-201ENST00000257765 LCE3EQ5T5B0 92 aa3.65□□□□□ -1.83
KHDC1-201ENST00000257765 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
KHDC1-201ENST00000257765 PMAIP1Q13794 54 aa3.49□□□□□ -1.85
KHDC1-201ENST00000257765 PRAC1Q96KF2 57 aa3.49□□□□□ -1.85
KHDC1-201ENST00000257765 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
KHDC1-201ENST00000257765 MUC19Q7Z5P9 8384 aa3.33□□□□□ -1.88
KHDC1-201ENST00000257765 PRO0628Q9UI54 55 aa3.24□□□□□ -1.89
KHDC1-201ENST00000257765 KTN1-AS1Q86SY8 53 aa3.1□□□□□ -1.91
KHDC1-201ENST00000257765 LUZP6Q538Z0 58 aa3.04□□□□□ -1.92
KHDC1-201ENST00000257765 KRTAP21-1Q3LI58 79 aa2.9□□□□□ -1.95
KHDC1-201ENST00000257765 NDUFAF8A1L188 74 aa2.59□□□□□ -1.99
KHDC1-201ENST00000257765 PRM1P04553 51 aa2.53□□□□□ -2
KHDC1-201ENST00000257765 MUC16Q8WXI7 14507 aa2.31□□□□□ -2.04
KHDC1-201ENST00000257765 INE1O15225 51 aa1.86□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 63.2 ms