RNA–Protein interactions for RNA: ENST00000255152.2

ZSWIM3-201, Transcript of zinc finger SWIM-type containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZSWIM3, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZSWIM3-201ENST00000255152 MACF1Q9UPN3 7388 aaKnown RBP4.51□□□□□ -1.69
ZSWIM3-201ENST00000255152 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
ZSWIM3-201ENST00000255152 KRTAP4-7Q9BYR0 210 aa4.36□□□□□ -1.71
ZSWIM3-201ENST00000255152 MUC12Q9UKN1 5478 aa4.33□□□□□ -1.72
ZSWIM3-201ENST00000255152 KRTAP12-4P60329 112 aa4.33□□□□□ -1.72
ZSWIM3-201ENST00000255152 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
ZSWIM3-201ENST00000255152 KRTAP19-7Q3SYF9 63 aa4.3□□□□□ -1.72
ZSWIM3-201ENST00000255152 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
ZSWIM3-201ENST00000255152 KRTAP2-2Q9BYT5 123 aa4.29□□□□□ -1.72
ZSWIM3-201ENST00000255152 SPRR2FQ96RM1 72 aa4.28□□□□□ -1.72
ZSWIM3-201ENST00000255152 KRTAP9-7A8MTY7 169 aa4.21□□□□□ -1.73
ZSWIM3-201ENST00000255152 MT1EP04732 61 aa4.21□□□□□ -1.73
ZSWIM3-201ENST00000255152 MDN1Q9NU22 5596 aa4.2□□□□□ -1.74
ZSWIM3-201ENST00000255152 MT1LQ93083 61 aa4.18□□□□□ -1.74
ZSWIM3-201ENST00000255152 KRTAP5-9P26371 169 aa4.12□□□□□ -1.75
ZSWIM3-201ENST00000255152 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
ZSWIM3-201ENST00000255152 KRTAP6-3Q3LI67 103 aa4.1□□□□□ -1.75
ZSWIM3-201ENST00000255152 DSTQ03001 7570 aaKnown RBP4.09□□□□□ -1.75
ZSWIM3-201ENST00000255152 LCE1EQ5T753 118 aa4.08□□□□□ -1.76
ZSWIM3-201ENST00000255152 KRTAP19-3Q7Z4W3 81 aa4.06□□□□□ -1.76
ZSWIM3-201ENST00000255152 SPRR2EP22531 72 aa4.06□□□□□ -1.76
ZSWIM3-201ENST00000255152 SPRR2BP35325 72 aa4.06□□□□□ -1.76
ZSWIM3-201ENST00000255152 SPRR2AP35326 72 aa4.06□□□□□ -1.76
ZSWIM3-201ENST00000255152 LOC100996750A0A140TA64 210 aa4.03□□□□□ -1.76
ZSWIM3-201ENST00000255152 KRTAP4-3Q9BYR4 195 aa4.03□□□□□ -1.76
ZSWIM3-201ENST00000255152 MT1GP13640 62 aa4□□□□□ -1.77
ZSWIM3-201ENST00000255152 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
ZSWIM3-201ENST00000255152 MT1MQ8N339 61 aa3.98□□□□□ -1.77
ZSWIM3-201ENST00000255152 LCE1FQ5T754 118 aa3.97□□□□□ -1.77
ZSWIM3-201ENST00000255152 PRM1P04553 51 aa3.9□□□□□ -1.79
ZSWIM3-201ENST00000255152 SPRR2DP22532 72 aa3.9□□□□□ -1.79
ZSWIM3-201ENST00000255152 LCE1DQ5T752 114 aa3.87□□□□□ -1.79
ZSWIM3-201ENST00000255152 NEBP20929 6669 aa3.87□□□□□ -1.79
ZSWIM3-201ENST00000255152 MT1AP04731 61 aa3.84□□□□□ -1.8
ZSWIM3-201ENST00000255152 KRTAP4-9Q9BYQ8 210 aa3.84□□□□□ -1.8
ZSWIM3-201ENST00000255152 LCE3BQ5TA77 95 aa3.82□□□□□ -1.8
ZSWIM3-201ENST00000255152 KRTAP5-5Q701N2 237 aaPredicted RBP3.82□□□□□ -1.8
ZSWIM3-201ENST00000255152 LCE3EQ5T5B0 92 aa3.8□□□□□ -1.8
ZSWIM3-201ENST00000255152 SYNE1Q8NF91 8797 aaKnown RBP3.79□□□□□ -1.8
ZSWIM3-201ENST00000255152 LCE3DQ9BYE3 92 aa3.78□□□□□ -1.8
ZSWIM3-201ENST00000255152 KRTAP20-1Q3LI63 56 aa3.68□□□□□ -1.82
ZSWIM3-201ENST00000255152 KRTAP9-4Q9BYQ2 154 aa3.63□□□□□ -1.83
ZSWIM3-201ENST00000255152 KRTAP6-2Q3LI66 62 aa3.58□□□□□ -1.84
ZSWIM3-201ENST00000255152 KRTAP6-1Q3LI64 71 aa3.55□□□□□ -1.84
ZSWIM3-201ENST00000255152 MT4P47944 62 aa3.47□□□□□ -1.85
ZSWIM3-201ENST00000255152 KRTAP9-9Q9BYP9 154 aa3.43□□□□□ -1.86
ZSWIM3-201ENST00000255152 KRTAP5-4Q6L8H1 288 aa3.4□□□□□ -1.86
ZSWIM3-201ENST00000255152 KRTAP4-6Q9BYQ5 205 aa3.4□□□□□ -1.86
ZSWIM3-201ENST00000255152 OBSCNQ5VST9 7968 aa3.36□□□□□ -1.87
ZSWIM3-201ENST00000255152 LCE4AQ5TA78 99 aa3.35□□□□□ -1.87
ZSWIM3-201ENST00000255152 HMCN1Q96RW7 5635 aa3.33□□□□□ -1.88
ZSWIM3-201ENST00000255152 KRTAP20-2Q3LI61 65 aa3.25□□□□□ -1.89
ZSWIM3-201ENST00000255152 GPR98Q8WXG9 6306 aa3.21□□□□□ -1.9
ZSWIM3-201ENST00000255152 MT3P25713 68 aa3.15□□□□□ -1.9
ZSWIM3-201ENST00000255152 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
ZSWIM3-201ENST00000255152 KRTAP5-3Q6L8H2 238 aa3.11□□□□□ -1.91
ZSWIM3-201ENST00000255152 KRTAP5-2Q701N4 177 aa3.06□□□□□ -1.92
ZSWIM3-201ENST00000255152 AHNAK2Q8IVF2 5795 aa2.92□□□□□ -1.94
ZSWIM3-201ENST00000255152 KRTAP5-10Q6L8G5 202 aa2.89□□□□□ -1.95
ZSWIM3-201ENST00000255152 KRTAP4-11Q9BYQ6 195 aa2.88□□□□□ -1.95
ZSWIM3-201ENST00000255152 KRTAP5-7Q6L8G8 165 aa2.81□□□□□ -1.96
ZSWIM3-201ENST00000255152 KRTAP5-8O75690 187 aa2.73□□□□□ -1.97
ZSWIM3-201ENST00000255152 LCE1BQ5T7P3 118 aa2.71□□□□□ -1.98
ZSWIM3-201ENST00000255152 KRTAP5-1Q6L8H4 278 aa2.71□□□□□ -1.98
ZSWIM3-201ENST00000255152 MUC5ACP98088 5654 aa2.68□□□□□ -1.98
ZSWIM3-201ENST00000255152 LCE1CQ5T751 118 aa2.64□□□□□ -1.99
ZSWIM3-201ENST00000255152 KRTAP4-2Q9BYR5 136 aa2.59□□□□□ -2
ZSWIM3-201ENST00000255152 KRTAP21-1Q3LI58 79 aa2.52□□□□□ -2.01
ZSWIM3-201ENST00000255152 MUC5BQ9HC84 5762 aaPredicted RBP2.49□□□□□ -2.01
ZSWIM3-201ENST00000255152 AHNAKQ09666 5890 aaKnown RBP2.45□□□□□ -2.02
ZSWIM3-201ENST00000255152 KRTAP4-12Q9BQ66 201 aa2.32□□□□□ -2.04
ZSWIM3-201ENST00000255152 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.31□□□□□ -2.04
ZSWIM3-201ENST00000255152 KRTAP21-2Q3LI59 83 aa2.27□□□□□ -2.05
ZSWIM3-201ENST00000255152 KRTAP5-11Q6L8G4 156 aa2.23□□□□□ -2.05
ZSWIM3-201ENST00000255152 KRTAP4-4Q9BYR3 166 aa2.16□□□□□ -2.06
ZSWIM3-201ENST00000255152 PHGR1C9JFL3 82 aa1.94□□□□□ -2.1
ZSWIM3-201ENST00000255152 MUC16Q8WXI7 14507 aa1.24□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 68.6 ms