RNA–Protein interactions for RNA: ENST00000254719.9

RPA1-201, Transcript of replication protein A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA1, Length 4,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-201ENST00000254719 SYNE1Q8NF91 8797 aaKnown RBP3.36□□□□□ -1.87
RPA1-201ENST00000254719 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
RPA1-201ENST00000254719 MT3P25713 68 aa3.33□□□□□ -1.88
RPA1-201ENST00000254719 CRCT1Q9UGL9 99 aa3.32□□□□□ -1.88
RPA1-201ENST00000254719 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
RPA1-201ENST00000254719 MACF1Q9UPN3 7388 aaKnown RBP3.27□□□□□ -1.89
RPA1-201ENST00000254719 KRTAP19-6Q3LI70 58 aa3.23□□□□□ -1.89
RPA1-201ENST00000254719 MT1EP04732 61 aa3.22□□□□□ -1.89
RPA1-201ENST00000254719 MT1LQ93083 61 aa3.2□□□□□ -1.9
RPA1-201ENST00000254719 KRTAP4-3Q9BYR4 195 aa3.17□□□□□ -1.9
RPA1-201ENST00000254719 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
RPA1-201ENST00000254719 KRTAP2-3P0C7H8 128 aa3.14□□□□□ -1.91
RPA1-201ENST00000254719 KRTAP2-4Q9BYR9 128 aa3.14□□□□□ -1.91
RPA1-201ENST00000254719 KRTAP2-1Q9BYU5 128 aa3.14□□□□□ -1.91
RPA1-201ENST00000254719 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
RPA1-201ENST00000254719 MT1GP13640 62 aa3.1□□□□□ -1.91
RPA1-201ENST00000254719 SPRR2FQ96RM1 72 aa3.09□□□□□ -1.91
RPA1-201ENST00000254719 KRTAP9-7A8MTY7 169 aa3.05□□□□□ -1.92
RPA1-201ENST00000254719 KRTAP19-3Q7Z4W3 81 aa2.99□□□□□ -1.93
RPA1-201ENST00000254719 LCE5AQ5TCM9 118 aa2.98□□□□□ -1.93
RPA1-201ENST00000254719 MT1MQ8N339 61 aa2.98□□□□□ -1.93
RPA1-201ENST00000254719 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.98□□□□□ -1.93
RPA1-201ENST00000254719 LCE4AQ5TA78 99 aa2.96□□□□□ -1.94
RPA1-201ENST00000254719 KRTAP4-9Q9BYQ8 210 aa2.95□□□□□ -1.94
RPA1-201ENST00000254719 KRTAP12-4P60329 112 aa2.91□□□□□ -1.94
RPA1-201ENST00000254719 SPRR2EP22531 72 aa2.88□□□□□ -1.95
RPA1-201ENST00000254719 SPRR2BP35325 72 aa2.88□□□□□ -1.95
RPA1-201ENST00000254719 SPRR2AP35326 72 aa2.88□□□□□ -1.95
RPA1-201ENST00000254719 KRTAP9-4Q9BYQ2 154 aa2.87□□□□□ -1.95
RPA1-201ENST00000254719 KRTAP5-5Q701N2 237 aaPredicted RBP2.87□□□□□ -1.95
RPA1-201ENST00000254719 KRTAP5-9P26371 169 aa2.84□□□□□ -1.95
RPA1-201ENST00000254719 LCE3BQ5TA77 95 aa2.84□□□□□ -1.96
RPA1-201ENST00000254719 KRTAP6-3Q3LI67 103 aa2.82□□□□□ -1.96
RPA1-201ENST00000254719 LCE3DQ9BYE3 92 aa2.81□□□□□ -1.96
RPA1-201ENST00000254719 LCE1AQ5T7P2 110 aa2.79□□□□□ -1.96
RPA1-201ENST00000254719 LCE3EQ5T5B0 92 aa2.79□□□□□ -1.96
RPA1-201ENST00000254719 SPRR2DP22532 72 aa2.78□□□□□ -1.96
RPA1-201ENST00000254719 KRTAP6-1Q3LI64 71 aa2.77□□□□□ -1.97
RPA1-201ENST00000254719 KRTAP20-1Q3LI63 56 aa2.73□□□□□ -1.97
RPA1-201ENST00000254719 MT1AP04731 61 aa2.71□□□□□ -1.98
RPA1-201ENST00000254719 LCE1FQ5T754 118 aa2.69□□□□□ -1.98
RPA1-201ENST00000254719 MUC19Q7Z5P9 8384 aa2.66□□□□□ -1.98
RPA1-201ENST00000254719 PRM1P04553 51 aa2.64□□□□□ -1.99
RPA1-201ENST00000254719 NEBP20929 6669 aa2.57□□□□□ -2
RPA1-201ENST00000254719 KRTAP2-2Q9BYT5 123 aa2.54□□□□□ -2
RPA1-201ENST00000254719 LCE1EQ5T753 118 aa2.53□□□□□ -2
RPA1-201ENST00000254719 MT4P47944 62 aa2.51□□□□□ -2.01
RPA1-201ENST00000254719 KRTAP5-4Q6L8H1 288 aa2.5□□□□□ -2.01
RPA1-201ENST00000254719 HMCN1Q96RW7 5635 aa2.47□□□□□ -2.01
RPA1-201ENST00000254719 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
RPA1-201ENST00000254719 KRTAP6-2Q3LI66 62 aa2.43□□□□□ -2.02
RPA1-201ENST00000254719 KRTAP4-6Q9BYQ5 205 aa2.38□□□□□ -2.03
RPA1-201ENST00000254719 GPR98Q8WXG9 6306 aa2.35□□□□□ -2.03
RPA1-201ENST00000254719 KRTAP5-2Q701N4 177 aa2.35□□□□□ -2.03
RPA1-201ENST00000254719 LCE1DQ5T752 114 aa2.3□□□□□ -2.04
RPA1-201ENST00000254719 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
RPA1-201ENST00000254719 LCE1BQ5T7P3 118 aa2.25□□□□□ -2.05
RPA1-201ENST00000254719 MUC5ACP98088 5654 aa2.25□□□□□ -2.05
RPA1-201ENST00000254719 KRTAP20-2Q3LI61 65 aa2.24□□□□□ -2.05
RPA1-201ENST00000254719 KRTAP4-12Q9BQ66 201 aa2.14□□□□□ -2.07
RPA1-201ENST00000254719 KRTAP4-11Q9BYQ6 195 aa2.09□□□□□ -2.08
RPA1-201ENST00000254719 KRTAP5-1Q6L8H4 278 aa2.04□□□□□ -2.08
RPA1-201ENST00000254719 KRTAP5-10Q6L8G5 202 aa2.03□□□□□ -2.08
RPA1-201ENST00000254719 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
RPA1-201ENST00000254719 AHNAK2Q8IVF2 5795 aa1.94□□□□□ -2.1
RPA1-201ENST00000254719 KRTAP5-7Q6L8G8 165 aa1.94□□□□□ -2.1
RPA1-201ENST00000254719 LCE1CQ5T751 118 aa1.89□□□□□ -2.11
RPA1-201ENST00000254719 KRTAP21-2Q3LI59 83 aa1.88□□□□□ -2.11
RPA1-201ENST00000254719 KRTAP5-8O75690 187 aa1.88□□□□□ -2.11
RPA1-201ENST00000254719 MUC5BQ9HC84 5762 aaPredicted RBP1.87□□□□□ -2.11
RPA1-201ENST00000254719 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
RPA1-201ENST00000254719 KRTAP4-4Q9BYR3 166 aa1.82□□□□□ -2.12
RPA1-201ENST00000254719 AHNAKQ09666 5890 aaKnown RBP1.74□□□□□ -2.13
RPA1-201ENST00000254719 KRTAP5-11Q6L8G4 156 aa1.62□□□□□ -2.15
RPA1-201ENST00000254719 KRTAP21-1Q3LI58 79 aa1.55□□□□□ -2.16
RPA1-201ENST00000254719 PHGR1C9JFL3 82 aa1.45□□□□□ -2.18
RPA1-201ENST00000254719 MUC16Q8WXI7 14507 aa1□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 41.1 ms