RNA–Protein interactions for RNA: ENST00000253193.8

LRP3-201, Transcript of LDL receptor related protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRP3, Length 3,807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-201ENST00000253193 KRTAP4-3Q9BYR4 195 aa6.15□□□□□ -1.42
LRP3-201ENST00000253193 MT1GP13640 62 aa6.14□□□□□ -1.43
LRP3-201ENST00000253193 LOC100996750A0A140TA64 210 aa6.13□□□□□ -1.43
LRP3-201ENST00000253193 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
LRP3-201ENST00000253193 KRTAP19-4Q3LI73 84 aa6.09□□□□□ -1.43
LRP3-201ENST00000253193 KRTAP19-6Q3LI70 58 aa6.06□□□□□ -1.44
LRP3-201ENST00000253193 FCGBPQ9Y6R7 5405 aaPredicted RBP6.06□□□□□ -1.44
LRP3-201ENST00000253193 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
LRP3-201ENST00000253193 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
LRP3-201ENST00000253193 MT1MQ8N339 61 aa5.92□□□□□ -1.46
LRP3-201ENST00000253193 SYNE1Q8NF91 8797 aaKnown RBP5.89□□□□□ -1.47
LRP3-201ENST00000253193 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
LRP3-201ENST00000253193 LCE3BQ5TA77 95 aa5.78□□□□□ -1.48
LRP3-201ENST00000253193 KRTAP12-4P60329 112 aa5.78□□□□□ -1.48
LRP3-201ENST00000253193 MACF1Q9UPN3 7388 aaKnown RBP5.7□□□□□ -1.5
LRP3-201ENST00000253193 SYNE2Q8WXH0 6885 aaKnown RBP5.68□□□□□ -1.5
LRP3-201ENST00000253193 OBSCNQ5VST9 7968 aa5.67□□□□□ -1.5
LRP3-201ENST00000253193 KRTAP4-9Q9BYQ8 210 aa5.6□□□□□ -1.51
LRP3-201ENST00000253193 LCE5AQ5TCM9 118 aa5.59□□□□□ -1.51
LRP3-201ENST00000253193 MDN1Q9NU22 5596 aa5.48□□□□□ -1.53
LRP3-201ENST00000253193 KRTAP6-1Q3LI64 71 aa5.41□□□□□ -1.54
LRP3-201ENST00000253193 SPRR2EP22531 72 aa5.4□□□□□ -1.54
LRP3-201ENST00000253193 SPRR2BP35325 72 aa5.4□□□□□ -1.54
LRP3-201ENST00000253193 SPRR2AP35326 72 aa5.4□□□□□ -1.54
LRP3-201ENST00000253193 LCE3DQ9BYE3 92 aa5.37□□□□□ -1.55
LRP3-201ENST00000253193 KRTAP9-2Q9BYQ4 174 aa5.29□□□□□ -1.56
LRP3-201ENST00000253193 MT1AP04731 61 aa5.28□□□□□ -1.56
LRP3-201ENST00000253193 LCE3EQ5T5B0 92 aa5.27□□□□□ -1.57
LRP3-201ENST00000253193 LCE1AQ5T7P2 110 aa5.26□□□□□ -1.57
LRP3-201ENST00000253193 KRTAP9-7A8MTY7 169 aa5.22□□□□□ -1.57
LRP3-201ENST00000253193 SPRR2DP22532 72 aa5.15□□□□□ -1.58
LRP3-201ENST00000253193 PRM1P04553 51 aa5.11□□□□□ -1.59
LRP3-201ENST00000253193 KRTAP5-5Q701N2 237 aaPredicted RBP5.09□□□□□ -1.59
LRP3-201ENST00000253193 KRTAP5-9P26371 169 aa5.02□□□□□ -1.61
LRP3-201ENST00000253193 KRTAP9-4Q9BYQ2 154 aa4.97□□□□□ -1.61
LRP3-201ENST00000253193 KRTAP6-2Q3LI66 62 aa4.93□□□□□ -1.62
LRP3-201ENST00000253193 MT3P25713 68 aa4.89□□□□□ -1.63
LRP3-201ENST00000253193 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
LRP3-201ENST00000253193 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
LRP3-201ENST00000253193 MT4P47944 62 aa4.69□□□□□ -1.66
LRP3-201ENST00000253193 KRTAP9-6A0A140TA67 174 aa4.54□□□□□ -1.68
LRP3-201ENST00000253193 KRTAP4-6Q9BYQ5 205 aa4.5□□□□□ -1.69
LRP3-201ENST00000253193 KRTAP2-2Q9BYT5 123 aa4.44□□□□□ -1.7
LRP3-201ENST00000253193 NEBP20929 6669 aa4.39□□□□□ -1.71
LRP3-201ENST00000253193 LCE1DQ5T752 114 aa4.35□□□□□ -1.71
LRP3-201ENST00000253193 KRTAP5-4Q6L8H1 288 aa4.29□□□□□ -1.72
LRP3-201ENST00000253193 KRTAP20-2Q3LI61 65 aa4.26□□□□□ -1.73
LRP3-201ENST00000253193 MUC19Q7Z5P9 8384 aa4.25□□□□□ -1.73
LRP3-201ENST00000253193 LCE1BQ5T7P3 118 aa4.24□□□□□ -1.73
LRP3-201ENST00000253193 LCE4AQ5TA78 99 aa4.21□□□□□ -1.73
LRP3-201ENST00000253193 HMCN1Q96RW7 5635 aa4.18□□□□□ -1.74
LRP3-201ENST00000253193 MUC5ACP98088 5654 aa4.06□□□□□ -1.76
LRP3-201ENST00000253193 KRTAP5-2Q701N4 177 aa3.98□□□□□ -1.77
LRP3-201ENST00000253193 KRTAP20-1Q3LI63 56 aa3.96□□□□□ -1.78
LRP3-201ENST00000253193 KRTAP4-11Q9BYQ6 195 aa3.91□□□□□ -1.78
LRP3-201ENST00000253193 LCE1EQ5T753 118 aa3.91□□□□□ -1.78
LRP3-201ENST00000253193 KRTAP5-3Q6L8H2 238 aa3.86□□□□□ -1.79
LRP3-201ENST00000253193 KRTAP5-10Q6L8G5 202 aa3.71□□□□□ -1.82
LRP3-201ENST00000253193 KRTAP4-2Q9BYR5 136 aa3.57□□□□□ -1.84
LRP3-201ENST00000253193 LCE1CQ5T751 118 aa3.53□□□□□ -1.84
LRP3-201ENST00000253193 KRTAP5-1Q6L8H4 278 aa3.53□□□□□ -1.84
LRP3-201ENST00000253193 KRTAP4-4Q9BYR3 166 aa3.47□□□□□ -1.85
LRP3-201ENST00000253193 AHNAK2Q8IVF2 5795 aa3.37□□□□□ -1.87
LRP3-201ENST00000253193 KRTAP21-2Q3LI59 83 aa3.34□□□□□ -1.87
LRP3-201ENST00000253193 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
LRP3-201ENST00000253193 MUC5BQ9HC84 5762 aaPredicted RBP3.26□□□□□ -1.89
LRP3-201ENST00000253193 KRTAP5-8O75690 187 aa3.26□□□□□ -1.89
LRP3-201ENST00000253193 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.17□□□□□ -1.9
LRP3-201ENST00000253193 KRTAP21-1Q3LI58 79 aa3.09□□□□□ -1.92
LRP3-201ENST00000253193 KRTAP9-9Q9BYP9 154 aa3.01□□□□□ -1.93
LRP3-201ENST00000253193 KRTAP5-11Q6L8G4 156 aa3□□□□□ -1.93
LRP3-201ENST00000253193 LCE1FQ5T754 118 aa3□□□□□ -1.93
LRP3-201ENST00000253193 GPR98Q8WXG9 6306 aa2.99□□□□□ -1.93
LRP3-201ENST00000253193 KRTAP5-7Q6L8G8 165 aa2.97□□□□□ -1.93
LRP3-201ENST00000253193 PHGR1C9JFL3 82 aa2.62□□□□□ -1.99
LRP3-201ENST00000253193 AHNAKQ09666 5890 aaKnown RBP2.54□□□□□ -2
LRP3-201ENST00000253193 MUC16Q8WXI7 14507 aa1.77□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 11 ms