RNA–Protein interactions for RNA: ENST00000250489.8

TMEM55B-201, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-201ENST00000250489 KRTAP9-6A0A140TA67 174 aa8.71□□□□□ -1.02
TMEM55B-201ENST00000250489 MACF1Q9UPN3 7388 aaKnown RBP8.55□□□□□ -1.04
TMEM55B-201ENST00000250489 KRTAP19-3Q7Z4W3 81 aa8.44□□□□□ -1.06
TMEM55B-201ENST00000250489 SYNE2Q8WXH0 6885 aaKnown RBP8.42□□□□□ -1.06
TMEM55B-201ENST00000250489 MT1GP13640 62 aa8.39□□□□□ -1.07
TMEM55B-201ENST00000250489 MUC12Q9UKN1 5478 aa8.38□□□□□ -1.07
TMEM55B-201ENST00000250489 MT1MQ8N339 61 aa8.37□□□□□ -1.07
TMEM55B-201ENST00000250489 KRTAP4-3Q9BYR4 195 aa8.35□□□□□ -1.07
TMEM55B-201ENST00000250489 SPRR2FQ96RM1 72 aa8.3□□□□□ -1.08
TMEM55B-201ENST00000250489 KRTAP2-3P0C7H8 128 aa8.29□□□□□ -1.08
TMEM55B-201ENST00000250489 KRTAP2-4Q9BYR9 128 aa8.29□□□□□ -1.08
TMEM55B-201ENST00000250489 KRTAP2-1Q9BYU5 128 aa8.29□□□□□ -1.08
TMEM55B-201ENST00000250489 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
TMEM55B-201ENST00000250489 INE1O15225 51 aa8.23□□□□□ -1.09
TMEM55B-201ENST00000250489 LCE5AQ5TCM9 118 aa8.21□□□□□ -1.09
TMEM55B-201ENST00000250489 LOC100996750A0A140TA64 210 aa8.2□□□□□ -1.1
TMEM55B-201ENST00000250489 KRTAP5-9P26371 169 aa7.96□□□□□ -1.14
TMEM55B-201ENST00000250489 KRTAP9-7A8MTY7 169 aa7.93□□□□□ -1.14
TMEM55B-201ENST00000250489 KRTAP6-3Q3LI67 103 aa7.9□□□□□ -1.15
TMEM55B-201ENST00000250489 LCE1AQ5T7P2 110 aa7.85□□□□□ -1.15
TMEM55B-201ENST00000250489 MDN1Q9NU22 5596 aa7.85□□□□□ -1.15
TMEM55B-201ENST00000250489 DSTQ03001 7570 aaKnown RBP7.81□□□□□ -1.16
TMEM55B-201ENST00000250489 SPRR2EP22531 72 aa7.7□□□□□ -1.18
TMEM55B-201ENST00000250489 SPRR2BP35325 72 aa7.7□□□□□ -1.18
TMEM55B-201ENST00000250489 SPRR2AP35326 72 aa7.7□□□□□ -1.18
TMEM55B-201ENST00000250489 NEBP20929 6669 aa7.62□□□□□ -1.19
TMEM55B-201ENST00000250489 KRTAP6-1Q3LI64 71 aa7.49□□□□□ -1.21
TMEM55B-201ENST00000250489 MT1AP04731 61 aa7.48□□□□□ -1.21
TMEM55B-201ENST00000250489 KRTAP5-5Q701N2 237 aaPredicted RBP7.48□□□□□ -1.21
TMEM55B-201ENST00000250489 LCE3BQ5TA77 95 aa7.45□□□□□ -1.22
TMEM55B-201ENST00000250489 SPRR2DP22532 72 aa7.39□□□□□ -1.23
TMEM55B-201ENST00000250489 KRTAP4-9Q9BYQ8 210 aa7.19□□□□□ -1.26
TMEM55B-201ENST00000250489 KRTAP12-4P60329 112 aa7.18□□□□□ -1.26
TMEM55B-201ENST00000250489 SYNE1Q8NF91 8797 aaKnown RBP7.16□□□□□ -1.26
TMEM55B-201ENST00000250489 KRTAP9-4Q9BYQ2 154 aa7.06□□□□□ -1.28
TMEM55B-201ENST00000250489 KRTAP20-1Q3LI63 56 aa6.98□□□□□ -1.29
TMEM55B-201ENST00000250489 LCE3DQ9BYE3 92 aa6.94□□□□□ -1.3
TMEM55B-201ENST00000250489 LCE3EQ5T5B0 92 aa6.82□□□□□ -1.32
TMEM55B-201ENST00000250489 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
TMEM55B-201ENST00000250489 KRTAP5-4Q6L8H1 288 aa6.8□□□□□ -1.32
TMEM55B-201ENST00000250489 KRTAP6-2Q3LI66 62 aa6.78□□□□□ -1.32
TMEM55B-201ENST00000250489 MT3P25713 68 aa6.73□□□□□ -1.33
TMEM55B-201ENST00000250489 LCE4AQ5TA78 99 aa6.49□□□□□ -1.37
TMEM55B-201ENST00000250489 KRTAP4-6Q9BYQ5 205 aa6.49□□□□□ -1.37
TMEM55B-201ENST00000250489 MT4P47944 62 aa6.45□□□□□ -1.38
TMEM55B-201ENST00000250489 KRTAP20-2Q3LI61 65 aa6.37□□□□□ -1.39
TMEM55B-201ENST00000250489 HMCN1Q96RW7 5635 aa6.32□□□□□ -1.4
TMEM55B-201ENST00000250489 LCE1DQ5T752 114 aa6.32□□□□□ -1.4
TMEM55B-201ENST00000250489 PRM1P04553 51 aa6.29□□□□□ -1.4
TMEM55B-201ENST00000250489 KRTAP5-2Q701N4 177 aa6.29□□□□□ -1.4
TMEM55B-201ENST00000250489 OBSCNQ5VST9 7968 aa6.25□□□□□ -1.41
TMEM55B-201ENST00000250489 KRTAP5-3Q6L8H2 238 aa6.1□□□□□ -1.43
TMEM55B-201ENST00000250489 AHNAK2Q8IVF2 5795 aa5.73□□□□□ -1.49
TMEM55B-201ENST00000250489 LCE1EQ5T753 118 aa5.66□□□□□ -1.5
TMEM55B-201ENST00000250489 MUC5ACP98088 5654 aa5.57□□□□□ -1.52
TMEM55B-201ENST00000250489 GPR98Q8WXG9 6306 aa5.52□□□□□ -1.53
TMEM55B-201ENST00000250489 KRTAP5-10Q6L8G5 202 aa5.44□□□□□ -1.54
TMEM55B-201ENST00000250489 LCE1BQ5T7P3 118 aa5.43□□□□□ -1.54
TMEM55B-201ENST00000250489 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
TMEM55B-201ENST00000250489 KRTAP5-1Q6L8H4 278 aa5.37□□□□□ -1.55
TMEM55B-201ENST00000250489 KRTAP4-2Q9BYR5 136 aa5.33□□□□□ -1.56
TMEM55B-201ENST00000250489 LCE1CQ5T751 118 aa5.31□□□□□ -1.56
TMEM55B-201ENST00000250489 KRTAP5-8O75690 187 aa5.19□□□□□ -1.58
TMEM55B-201ENST00000250489 KRTAP5-7Q6L8G8 165 aa5.06□□□□□ -1.6
TMEM55B-201ENST00000250489 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.01□□□□□ -1.61
TMEM55B-201ENST00000250489 KRTAP21-2Q3LI59 83 aa4.87□□□□□ -1.63
TMEM55B-201ENST00000250489 KRTAP9-9Q9BYP9 154 aa4.74□□□□□ -1.65
TMEM55B-201ENST00000250489 MUC5BQ9HC84 5762 aaPredicted RBP4.68□□□□□ -1.66
TMEM55B-201ENST00000250489 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
TMEM55B-201ENST00000250489 AHNAKQ09666 5890 aaKnown RBP4.46□□□□□ -1.7
TMEM55B-201ENST00000250489 KRTAP4-4Q9BYR3 166 aa4.36□□□□□ -1.71
TMEM55B-201ENST00000250489 KRTAP4-12Q9BQ66 201 aa4.31□□□□□ -1.72
TMEM55B-201ENST00000250489 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
TMEM55B-201ENST00000250489 KRTAP21-1Q3LI58 79 aa3.93□□□□□ -1.78
TMEM55B-201ENST00000250489 LCE1FQ5T754 118 aa3.93□□□□□ -1.78
TMEM55B-201ENST00000250489 MUC19Q7Z5P9 8384 aa3.8□□□□□ -1.8
TMEM55B-201ENST00000250489 MUC16Q8WXI7 14507 aa2.64□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 5.7 ms