RNA–Protein interactions for RNA: ENST00000247461.8

CANX-201, Transcript of calnexin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CANX, Length 4,260 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CANX-201ENST00000247461 SPRR2DP22532 72 aa5.31□□□□□ -1.56
CANX-201ENST00000247461 MT1LQ93083 61 aa5.3□□□□□ -1.56
CANX-201ENST00000247461 MT1EP04732 61 aa5.29□□□□□ -1.56
CANX-201ENST00000247461 LCE3BQ5TA77 95 aa5.28□□□□□ -1.56
CANX-201ENST00000247461 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
CANX-201ENST00000247461 DSTQ03001 7570 aaKnown RBP5.23□□□□□ -1.57
CANX-201ENST00000247461 FCGBPQ9Y6R7 5405 aaPredicted RBP5.16□□□□□ -1.58
CANX-201ENST00000247461 KRTAP19-7Q3SYF9 63 aa5.16□□□□□ -1.58
CANX-201ENST00000247461 LCE2DQ5TA82 110 aaPredicted RBP5.15□□□□□ -1.59
CANX-201ENST00000247461 KRTAP4-3Q9BYR4 195 aa5.14□□□□□ -1.59
CANX-201ENST00000247461 KRTAP12-4P60329 112 aa5.14□□□□□ -1.59
CANX-201ENST00000247461 SYNE2Q8WXH0 6885 aaKnown RBP5.08□□□□□ -1.6
CANX-201ENST00000247461 MT1MQ8N339 61 aa5.08□□□□□ -1.6
CANX-201ENST00000247461 KMT2DO14686 5537 aa5.07□□□□□ -1.6
CANX-201ENST00000247461 LOC100996750A0A140TA64 210 aa5.06□□□□□ -1.6
CANX-201ENST00000247461 KRTAP9-6A0A140TA67 174 aa5□□□□□ -1.61
CANX-201ENST00000247461 LCE3DQ9BYE3 92 aa4.91□□□□□ -1.62
CANX-201ENST00000247461 KRTAP9-6A8MVA2 160 aa4.87□□□□□ -1.63
CANX-201ENST00000247461 MUC12Q9UKN1 5478 aa4.83□□□□□ -1.64
CANX-201ENST00000247461 MT4P47944 62 aa4.83□□□□□ -1.64
CANX-201ENST00000247461 SSPOA2VEC9 5147 aa4.81□□□□□ -1.64
CANX-201ENST00000247461 LCE3EQ5T5B0 92 aa4.81□□□□□ -1.64
CANX-201ENST00000247461 MACF1Q9UPN3 7388 aaKnown RBP4.79□□□□□ -1.64
CANX-201ENST00000247461 KRTAP9-7A8MTY7 169 aa4.75□□□□□ -1.65
CANX-201ENST00000247461 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.72□□□□□ -1.65
CANX-201ENST00000247461 KRTAP2-3P0C7H8 128 aa4.71□□□□□ -1.66
CANX-201ENST00000247461 KRTAP2-4Q9BYR9 128 aa4.71□□□□□ -1.66
CANX-201ENST00000247461 KRTAP2-1Q9BYU5 128 aa4.71□□□□□ -1.66
CANX-201ENST00000247461 KRTAP4-9Q9BYQ8 210 aa4.66□□□□□ -1.66
CANX-201ENST00000247461 LCE1AQ5T7P2 110 aa4.65□□□□□ -1.67
CANX-201ENST00000247461 LCE5AQ5TCM9 118 aa4.63□□□□□ -1.67
CANX-201ENST00000247461 KRTAP6-3Q3LI67 103 aa4.62□□□□□ -1.67
CANX-201ENST00000247461 MT3P25713 68 aa4.62□□□□□ -1.67
CANX-201ENST00000247461 MT1AP04731 61 aa4.6□□□□□ -1.67
CANX-201ENST00000247461 KRTAP6-1Q3LI64 71 aa4.5□□□□□ -1.69
CANX-201ENST00000247461 MDN1Q9NU22 5596 aa4.46□□□□□ -1.69
CANX-201ENST00000247461 PRM1P04553 51 aa4.46□□□□□ -1.7
CANX-201ENST00000247461 KRTAP20-1Q3LI63 56 aa4.43□□□□□ -1.7
CANX-201ENST00000247461 LCE1DQ5T752 114 aa4.43□□□□□ -1.7
CANX-201ENST00000247461 LCE1BQ5T7P3 118 aa4.39□□□□□ -1.71
CANX-201ENST00000247461 KRTAP6-2Q3LI66 62 aa4.35□□□□□ -1.71
CANX-201ENST00000247461 KRTAP2-2Q9BYT5 123 aa4.27□□□□□ -1.73
CANX-201ENST00000247461 KRTAP9-4Q9BYQ2 154 aa4.24□□□□□ -1.73
CANX-201ENST00000247461 KRTAP5-9P26371 169 aa4.24□□□□□ -1.73
CANX-201ENST00000247461 NEBP20929 6669 aa4.19□□□□□ -1.74
CANX-201ENST00000247461 LCE4AQ5TA78 99 aa4.15□□□□□ -1.75
CANX-201ENST00000247461 KRTAP4-6Q9BYQ5 205 aa4□□□□□ -1.77
CANX-201ENST00000247461 MUC19Q7Z5P9 8384 aa3.94□□□□□ -1.78
CANX-201ENST00000247461 GPR98Q8WXG9 6306 aa3.79□□□□□ -1.8
CANX-201ENST00000247461 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
CANX-201ENST00000247461 KRTAP5-5Q701N2 237 aaPredicted RBP3.63□□□□□ -1.83
CANX-201ENST00000247461 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
CANX-201ENST00000247461 LCE1CQ5T751 118 aa3.55□□□□□ -1.84
CANX-201ENST00000247461 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
CANX-201ENST00000247461 LCE1FQ5T754 118 aa3.55□□□□□ -1.84
CANX-201ENST00000247461 KRTAP9-9Q9BYP9 154 aa3.48□□□□□ -1.85
CANX-201ENST00000247461 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
CANX-201ENST00000247461 KRTAP5-4Q6L8H1 288 aa3.45□□□□□ -1.86
CANX-201ENST00000247461 KRTAP4-11Q9BYQ6 195 aa3.41□□□□□ -1.86
CANX-201ENST00000247461 KRTAP4-12Q9BQ66 201 aa3.28□□□□□ -1.88
CANX-201ENST00000247461 KRTAP4-2Q9BYR5 136 aa3.28□□□□□ -1.88
CANX-201ENST00000247461 KRTAP4-4Q9BYR3 166 aa3.26□□□□□ -1.89
CANX-201ENST00000247461 KRTAP5-3Q6L8H2 238 aa3.23□□□□□ -1.89
CANX-201ENST00000247461 AHNAK2Q8IVF2 5795 aa3.22□□□□□ -1.89
CANX-201ENST00000247461 KRTAP5-8O75690 187 aa2.99□□□□□ -1.93
CANX-201ENST00000247461 KRTAP5-2Q701N4 177 aa2.99□□□□□ -1.93
CANX-201ENST00000247461 KRTAP5-10Q6L8G5 202 aa2.82□□□□□ -1.96
CANX-201ENST00000247461 MUC5BQ9HC84 5762 aaPredicted RBP2.75□□□□□ -1.97
CANX-201ENST00000247461 AHNAKQ09666 5890 aaKnown RBP2.72□□□□□ -1.97
CANX-201ENST00000247461 KRTAP5-1Q6L8H4 278 aa2.7□□□□□ -1.98
CANX-201ENST00000247461 KRTAP21-2Q3LI59 83 aa2.51□□□□□ -2.01
CANX-201ENST00000247461 KRTAP5-11Q6L8G4 156 aa2.48□□□□□ -2.01
CANX-201ENST00000247461 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.33□□□□□ -2.04
CANX-201ENST00000247461 PHGR1C9JFL3 82 aa2.32□□□□□ -2.04
CANX-201ENST00000247461 KRTAP5-7Q6L8G8 165 aa2.22□□□□□ -2.05
CANX-201ENST00000247461 KRTAP21-1Q3LI58 79 aa2.09□□□□□ -2.07
CANX-201ENST00000247461 MUC16Q8WXI7 14507 aa1.52□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 65.1 ms