RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 KRTAP2-4Q9BYR9 128 aa4.88□□□□□ -1.63
HIF3A-202ENST00000244303 KRTAP2-1Q9BYU5 128 aa4.88□□□□□ -1.63
HIF3A-202ENST00000244303 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
HIF3A-202ENST00000244303 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
HIF3A-202ENST00000244303 LOC100996750A0A140TA64 210 aa4.71□□□□□ -1.66
HIF3A-202ENST00000244303 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
HIF3A-202ENST00000244303 KRTAP19-3Q7Z4W3 81 aa4.7□□□□□ -1.66
HIF3A-202ENST00000244303 MT1GP13640 62 aa4.69□□□□□ -1.66
HIF3A-202ENST00000244303 MT1MQ8N339 61 aa4.67□□□□□ -1.66
HIF3A-202ENST00000244303 CRCT1Q9UGL9 99 aa4.66□□□□□ -1.66
HIF3A-202ENST00000244303 SPRR2FQ96RM1 72 aa4.63□□□□□ -1.67
HIF3A-202ENST00000244303 KRTAP9-6A0A140TA67 174 aa4.62□□□□□ -1.67
HIF3A-202ENST00000244303 MACF1Q9UPN3 7388 aaKnown RBP4.58□□□□□ -1.68
HIF3A-202ENST00000244303 LCE5AQ5TCM9 118 aa4.57□□□□□ -1.68
HIF3A-202ENST00000244303 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
HIF3A-202ENST00000244303 SYNE2Q8WXH0 6885 aaKnown RBP4.43□□□□□ -1.7
HIF3A-202ENST00000244303 KRTAP5-9P26371 169 aa4.41□□□□□ -1.7
HIF3A-202ENST00000244303 KRTAP12-4P60329 112 aa4.39□□□□□ -1.71
HIF3A-202ENST00000244303 LCE1AQ5T7P2 110 aa4.38□□□□□ -1.71
HIF3A-202ENST00000244303 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.33□□□□□ -1.72
HIF3A-202ENST00000244303 LCE3BQ5TA77 95 aa4.31□□□□□ -1.72
HIF3A-202ENST00000244303 MDN1Q9NU22 5596 aa4.31□□□□□ -1.72
HIF3A-202ENST00000244303 SPRR2EP22531 72 aa4.29□□□□□ -1.72
HIF3A-202ENST00000244303 SPRR2BP35325 72 aa4.29□□□□□ -1.72
HIF3A-202ENST00000244303 SPRR2AP35326 72 aa4.29□□□□□ -1.72
HIF3A-202ENST00000244303 KRTAP6-1Q3LI64 71 aa4.24□□□□□ -1.73
HIF3A-202ENST00000244303 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.73
HIF3A-202ENST00000244303 KRTAP4-9Q9BYQ8 210 aa4.21□□□□□ -1.73
HIF3A-202ENST00000244303 KRTAP9-7A8MTY7 169 aa4.19□□□□□ -1.74
HIF3A-202ENST00000244303 MT1AP04731 61 aa4.19□□□□□ -1.74
HIF3A-202ENST00000244303 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
HIF3A-202ENST00000244303 KRTAP5-5Q701N2 237 aaPredicted RBP4.15□□□□□ -1.74
HIF3A-202ENST00000244303 SPRR2DP22532 72 aa4.11□□□□□ -1.75
HIF3A-202ENST00000244303 LCE3DQ9BYE3 92 aa4.05□□□□□ -1.76
HIF3A-202ENST00000244303 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
HIF3A-202ENST00000244303 KRTAP9-4Q9BYQ2 154 aa3.95□□□□□ -1.78
HIF3A-202ENST00000244303 PRM1P04553 51 aa3.91□□□□□ -1.78
HIF3A-202ENST00000244303 NEBP20929 6669 aa3.91□□□□□ -1.78
HIF3A-202ENST00000244303 KRTAP6-2Q3LI66 62 aa3.8□□□□□ -1.8
HIF3A-202ENST00000244303 KRTAP5-4Q6L8H1 288 aa3.78□□□□□ -1.8
HIF3A-202ENST00000244303 MT3P25713 68 aa3.76□□□□□ -1.81
HIF3A-202ENST00000244303 OBSCNQ5VST9 7968 aa3.75□□□□□ -1.81
HIF3A-202ENST00000244303 KRTAP20-1Q3LI63 56 aa3.71□□□□□ -1.82
HIF3A-202ENST00000244303 KRTAP2-2Q9BYT5 123 aa3.65□□□□□ -1.82
HIF3A-202ENST00000244303 KRTAP4-6Q9BYQ5 205 aa3.63□□□□□ -1.83
HIF3A-202ENST00000244303 MT4P47944 62 aa3.6□□□□□ -1.83
HIF3A-202ENST00000244303 LCE4AQ5TA78 99 aa3.6□□□□□ -1.83
HIF3A-202ENST00000244303 KRTAP20-2Q3LI61 65 aa3.54□□□□□ -1.84
HIF3A-202ENST00000244303 KRTAP5-2Q701N4 177 aa3.49□□□□□ -1.85
HIF3A-202ENST00000244303 LCE1DQ5T752 114 aa3.45□□□□□ -1.86
HIF3A-202ENST00000244303 HMCN1Q96RW7 5635 aa3.41□□□□□ -1.86
HIF3A-202ENST00000244303 KRTAP5-3Q6L8H2 238 aa3.39□□□□□ -1.87
HIF3A-202ENST00000244303 LCE1EQ5T753 118 aa3.27□□□□□ -1.89
HIF3A-202ENST00000244303 MUC5ACP98088 5654 aa3.19□□□□□ -1.9
HIF3A-202ENST00000244303 LCE1FQ5T754 118 aa3.06□□□□□ -1.92
HIF3A-202ENST00000244303 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
HIF3A-202ENST00000244303 KRTAP5-1Q6L8H4 278 aa2.99□□□□□ -1.93
HIF3A-202ENST00000244303 AHNAK2Q8IVF2 5795 aa2.98□□□□□ -1.93
HIF3A-202ENST00000244303 KRTAP5-10Q6L8G5 202 aa2.98□□□□□ -1.93
HIF3A-202ENST00000244303 KRTAP4-11Q9BYQ6 195 aa2.98□□□□□ -1.93
HIF3A-202ENST00000244303 KRTAP4-2Q9BYR5 136 aa2.96□□□□□ -1.93
HIF3A-202ENST00000244303 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
HIF3A-202ENST00000244303 GPR98Q8WXG9 6306 aa2.95□□□□□ -1.94
HIF3A-202ENST00000244303 KRTAP5-8O75690 187 aa2.86□□□□□ -1.95
HIF3A-202ENST00000244303 KRTAP5-7Q6L8G8 165 aa2.8□□□□□ -1.96
HIF3A-202ENST00000244303 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.77□□□□□ -1.97
HIF3A-202ENST00000244303 KRTAP21-2Q3LI59 83 aa2.74□□□□□ -1.97
HIF3A-202ENST00000244303 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
HIF3A-202ENST00000244303 KRTAP4-4Q9BYR3 166 aa2.51□□□□□ -2.01
HIF3A-202ENST00000244303 KRTAP9-9Q9BYP9 154 aa2.5□□□□□ -2.01
HIF3A-202ENST00000244303 MUC5BQ9HC84 5762 aaPredicted RBP2.45□□□□□ -2.02
HIF3A-202ENST00000244303 KRTAP21-1Q3LI58 79 aa2.44□□□□□ -2.02
HIF3A-202ENST00000244303 KRTAP4-12Q9BQ66 201 aa2.43□□□□□ -2.02
HIF3A-202ENST00000244303 MUC19Q7Z5P9 8384 aa2.37□□□□□ -2.03
HIF3A-202ENST00000244303 AHNAKQ09666 5890 aaKnown RBP2.36□□□□□ -2.03
HIF3A-202ENST00000244303 PHGR1C9JFL3 82 aa2.21□□□□□ -2.06
HIF3A-202ENST00000244303 MUC16Q8WXI7 14507 aa1.5□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 53.7 ms