RNA–Protein interactions for RNA: ENST00000240159.8

RNF170-201, Transcript of ring finger protein 170, humanhuman

TSL 2

Gene RNF170, Length 2,023 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF170-201ENST00000240159 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
RNF170-201ENST00000240159 SYNE2Q8WXH0 6885 aaKnown RBP7.91□□□□□ -1.14
RNF170-201ENST00000240159 KRTAP9-6A0A140TA67 174 aa7.89□□□□□ -1.15
RNF170-201ENST00000240159 MUC12Q9UKN1 5478 aa7.87□□□□□ -1.15
RNF170-201ENST00000240159 KRTAP4-7Q9BYR0 210 aa7.86□□□□□ -1.15
RNF170-201ENST00000240159 KRTAP19-3Q7Z4W3 81 aa7.85□□□□□ -1.15
RNF170-201ENST00000240159 KRTAP5-9P26371 169 aa7.79□□□□□ -1.16
RNF170-201ENST00000240159 MT1GP13640 62 aa7.77□□□□□ -1.17
RNF170-201ENST00000240159 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.74□□□□□ -1.17
RNF170-201ENST00000240159 MT1MQ8N339 61 aa7.71□□□□□ -1.18
RNF170-201ENST00000240159 LCE5AQ5TCM9 118 aa7.69□□□□□ -1.18
RNF170-201ENST00000240159 KRTAP9-6A8MVA2 160 aa7.64□□□□□ -1.19
RNF170-201ENST00000240159 KRTAP4-3Q9BYR4 195 aa7.61□□□□□ -1.19
RNF170-201ENST00000240159 KRTAP6-3Q3LI67 103 aa7.59□□□□□ -1.19
RNF170-201ENST00000240159 LCE1AQ5T7P2 110 aa7.58□□□□□ -1.2
RNF170-201ENST00000240159 MDN1Q9NU22 5596 aa7.52□□□□□ -1.21
RNF170-201ENST00000240159 SPRR2EP22531 72 aa7.49□□□□□ -1.21
RNF170-201ENST00000240159 SPRR2BP35325 72 aa7.49□□□□□ -1.21
RNF170-201ENST00000240159 SPRR2AP35326 72 aa7.49□□□□□ -1.21
RNF170-201ENST00000240159 LOC100996750A0A140TA64 210 aa7.37□□□□□ -1.23
RNF170-201ENST00000240159 DSTQ03001 7570 aaKnown RBP7.29□□□□□ -1.24
RNF170-201ENST00000240159 KRTAP9-7A8MTY7 169 aa7.25□□□□□ -1.25
RNF170-201ENST00000240159 SPRR2DP22532 72 aa7.21□□□□□ -1.26
RNF170-201ENST00000240159 NEBP20929 6669 aa7.08□□□□□ -1.28
RNF170-201ENST00000240159 KRTAP2-3P0C7H8 128 aa7.08□□□□□ -1.28
RNF170-201ENST00000240159 KRTAP2-4Q9BYR9 128 aa7.08□□□□□ -1.28
RNF170-201ENST00000240159 KRTAP2-1Q9BYU5 128 aa7.08□□□□□ -1.28
RNF170-201ENST00000240159 INE1O15225 51 aa7.01□□□□□ -1.29
RNF170-201ENST00000240159 KRTAP5-5Q701N2 237 aaPredicted RBP6.94□□□□□ -1.3
RNF170-201ENST00000240159 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
RNF170-201ENST00000240159 MT1AP04731 61 aa6.83□□□□□ -1.32
RNF170-201ENST00000240159 KRTAP6-1Q3LI64 71 aa6.79□□□□□ -1.32
RNF170-201ENST00000240159 SYNE1Q8NF91 8797 aaKnown RBP6.55□□□□□ -1.36
RNF170-201ENST00000240159 KRTAP5-4Q6L8H1 288 aa6.55□□□□□ -1.36
RNF170-201ENST00000240159 KRTAP9-4Q9BYQ2 154 aa6.49□□□□□ -1.37
RNF170-201ENST00000240159 KRTAP2-2Q9BYT5 123 aa6.47□□□□□ -1.37
RNF170-201ENST00000240159 KRTAP20-1Q3LI63 56 aa6.43□□□□□ -1.38
RNF170-201ENST00000240159 KRTAP12-4P60329 112 aa6.38□□□□□ -1.39
RNF170-201ENST00000240159 LCE4AQ5TA78 99 aa6.37□□□□□ -1.39
RNF170-201ENST00000240159 KRTAP4-9Q9BYQ8 210 aa6.31□□□□□ -1.4
RNF170-201ENST00000240159 MT4P47944 62 aa6.28□□□□□ -1.4
RNF170-201ENST00000240159 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
RNF170-201ENST00000240159 KRTAP6-2Q3LI66 62 aa6.23□□□□□ -1.41
RNF170-201ENST00000240159 MT3P25713 68 aa6.17□□□□□ -1.42
RNF170-201ENST00000240159 LCE1DQ5T752 114 aa6.14□□□□□ -1.43
RNF170-201ENST00000240159 KRTAP20-2Q3LI61 65 aa6.13□□□□□ -1.43
RNF170-201ENST00000240159 HMCN1Q96RW7 5635 aa6.06□□□□□ -1.44
RNF170-201ENST00000240159 LCE3DQ9BYE3 92 aa6.04□□□□□ -1.44
RNF170-201ENST00000240159 KRTAP5-2Q701N4 177 aa5.97□□□□□ -1.45
RNF170-201ENST00000240159 KRTAP5-3Q6L8H2 238 aa5.9□□□□□ -1.47
RNF170-201ENST00000240159 LCE3EQ5T5B0 92 aa5.89□□□□□ -1.47
RNF170-201ENST00000240159 OBSCNQ5VST9 7968 aa5.68□□□□□ -1.5
RNF170-201ENST00000240159 KRTAP4-12Q9BQ66 201 aa5.38□□□□□ -1.55
RNF170-201ENST00000240159 LCE1EQ5T753 118 aa5.32□□□□□ -1.56
RNF170-201ENST00000240159 PRM1P04553 51 aa5.28□□□□□ -1.56
RNF170-201ENST00000240159 KRTAP4-11Q9BYQ6 195 aa5.28□□□□□ -1.56
RNF170-201ENST00000240159 AHNAK2Q8IVF2 5795 aa5.27□□□□□ -1.57
RNF170-201ENST00000240159 KRTAP9-9Q9BYP9 154 aa5.26□□□□□ -1.57
RNF170-201ENST00000240159 KRTAP5-1Q6L8H4 278 aa5.15□□□□□ -1.58
RNF170-201ENST00000240159 GPR98Q8WXG9 6306 aa5.13□□□□□ -1.59
RNF170-201ENST00000240159 KRTAP5-8O75690 187 aa5.08□□□□□ -1.6
RNF170-201ENST00000240159 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
RNF170-201ENST00000240159 LCE1BQ5T7P3 118 aa5.03□□□□□ -1.6
RNF170-201ENST00000240159 MUC5ACP98088 5654 aa4.99□□□□□ -1.61
RNF170-201ENST00000240159 KRTAP4-2Q9BYR5 136 aa4.99□□□□□ -1.61
RNF170-201ENST00000240159 LCE1CQ5T751 118 aa4.97□□□□□ -1.61
RNF170-201ENST00000240159 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
RNF170-201ENST00000240159 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.65□□□□□ -1.66
RNF170-201ENST00000240159 LCE1FQ5T754 118 aa4.63□□□□□ -1.67
RNF170-201ENST00000240159 KRTAP21-2Q3LI59 83 aa4.45□□□□□ -1.7
RNF170-201ENST00000240159 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
RNF170-201ENST00000240159 MUC5BQ9HC84 5762 aaPredicted RBP4.32□□□□□ -1.72
RNF170-201ENST00000240159 AHNAKQ09666 5890 aaKnown RBP4.03□□□□□ -1.76
RNF170-201ENST00000240159 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
RNF170-201ENST00000240159 PHGR1C9JFL3 82 aa3.76□□□□□ -1.81
RNF170-201ENST00000240159 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
RNF170-201ENST00000240159 KRTAP21-1Q3LI58 79 aa3.3□□□□□ -1.88
RNF170-201ENST00000240159 MUC16Q8WXI7 14507 aa2.42□□□□□ -2.02
Retrieved 78 of 20,778 RNA–protein pairs in 75.1 ms