RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 SYNE2Q8WXH0 6885 aaKnown RBP4.11□□□□□ -1.75
TNFAIP3-201ENST00000237289 MT1EP04732 61 aa4.02□□□□□ -1.77
TNFAIP3-201ENST00000237289 SPRR2DP22532 72 aa4.01□□□□□ -1.77
TNFAIP3-201ENST00000237289 KMT2DO14686 5537 aa4□□□□□ -1.77
TNFAIP3-201ENST00000237289 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
TNFAIP3-201ENST00000237289 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
TNFAIP3-201ENST00000237289 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
TNFAIP3-201ENST00000237289 MT1GP13640 62 aa3.97□□□□□ -1.77
TNFAIP3-201ENST00000237289 KRTAP19-4Q3LI73 84 aa3.94□□□□□ -1.78
TNFAIP3-201ENST00000237289 MT1LQ93083 61 aa3.92□□□□□ -1.78
TNFAIP3-201ENST00000237289 INE1O15225 51 aa3.91□□□□□ -1.78
TNFAIP3-201ENST00000237289 LCE1AQ5T7P2 110 aa3.9□□□□□ -1.78
TNFAIP3-201ENST00000237289 LCE3CQ5T5A8 94 aa3.85□□□□□ -1.79
TNFAIP3-201ENST00000237289 MT1MQ8N339 61 aa3.82□□□□□ -1.8
TNFAIP3-201ENST00000237289 MUC12Q9UKN1 5478 aa3.82□□□□□ -1.8
TNFAIP3-201ENST00000237289 KRTAP20-1Q3LI63 56 aa3.81□□□□□ -1.8
TNFAIP3-201ENST00000237289 LCE5AQ5TCM9 118 aa3.8□□□□□ -1.8
TNFAIP3-201ENST00000237289 LCE3BQ5TA77 95 aa3.79□□□□□ -1.8
TNFAIP3-201ENST00000237289 NEBP20929 6669 aa3.78□□□□□ -1.8
TNFAIP3-201ENST00000237289 KRTAP2-3P0C7H8 128 aa3.77□□□□□ -1.81
TNFAIP3-201ENST00000237289 KRTAP2-4Q9BYR9 128 aa3.77□□□□□ -1.81
TNFAIP3-201ENST00000237289 KRTAP4-7Q9BYR0 210 aa3.76□□□□□ -1.81
TNFAIP3-201ENST00000237289 MDN1Q9NU22 5596 aa3.72□□□□□ -1.81
TNFAIP3-201ENST00000237289 KRTAP4-3Q9BYR4 195 aa3.71□□□□□ -1.82
TNFAIP3-201ENST00000237289 KRTAP2-2Q9BYT5 123 aa3.67□□□□□ -1.82
TNFAIP3-201ENST00000237289 KRTAP2-1Q9BYU5 128 aa3.67□□□□□ -1.82
TNFAIP3-201ENST00000237289 DSTQ03001 7570 aaKnown RBP3.62□□□□□ -1.83
TNFAIP3-201ENST00000237289 LOC100996750A0A140TA64 210 aa3.54□□□□□ -1.84
TNFAIP3-201ENST00000237289 KRTAP12-4P60329 112 aa3.52□□□□□ -1.85
TNFAIP3-201ENST00000237289 MT4P47944 62 aa3.49□□□□□ -1.85
TNFAIP3-201ENST00000237289 SPRR5A0A1B0GTR4 108 aa3.47□□□□□ -1.85
TNFAIP3-201ENST00000237289 LCE4AQ5TA78 99 aa3.46□□□□□ -1.86
TNFAIP3-201ENST00000237289 KRTAP4-9Q9BYQ8 210 aa3.42□□□□□ -1.86
TNFAIP3-201ENST00000237289 SYNE1Q8NF91 8797 aaKnown RBP3.4□□□□□ -1.86
TNFAIP3-201ENST00000237289 KRTAP9-6A8MVA2 160 aa3.4□□□□□ -1.87
TNFAIP3-201ENST00000237289 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
TNFAIP3-201ENST00000237289 MT1AP04731 61 aa3.38□□□□□ -1.87
TNFAIP3-201ENST00000237289 LCE1DQ5T752 114 aa3.3□□□□□ -1.88
TNFAIP3-201ENST00000237289 KRTAP6-1Q3LI64 71 aa3.29□□□□□ -1.88
TNFAIP3-201ENST00000237289 KRTAP5-5Q701N2 237 aaPredicted RBP3.24□□□□□ -1.89
TNFAIP3-201ENST00000237289 KRTAP4-6Q9BYQ5 205 aa3.24□□□□□ -1.89
TNFAIP3-201ENST00000237289 KRTAP5-4Q6L8H1 288 aa3.22□□□□□ -1.89
TNFAIP3-201ENST00000237289 KRTAP9-4Q9BYQ2 154 aa3.21□□□□□ -1.9
TNFAIP3-201ENST00000237289 MT3P25713 68 aa3.2□□□□□ -1.9
TNFAIP3-201ENST00000237289 KRTAP20-2Q3LI61 65 aa3.16□□□□□ -1.9
TNFAIP3-201ENST00000237289 KRTAP6-2Q3LI66 62 aa3.13□□□□□ -1.91
TNFAIP3-201ENST00000237289 HMCN1Q96RW7 5635 aa3.05□□□□□ -1.92
TNFAIP3-201ENST00000237289 LCE3DQ9BYE3 92 aa2.98□□□□□ -1.93
TNFAIP3-201ENST00000237289 GPR98Q8WXG9 6306 aa2.93□□□□□ -1.94
TNFAIP3-201ENST00000237289 KRTAP5-3Q6L8H2 238 aa2.91□□□□□ -1.94
TNFAIP3-201ENST00000237289 LCE3EQ5T5B0 92 aa2.88□□□□□ -1.95
TNFAIP3-201ENST00000237289 KRTAP5-2Q701N4 177 aa2.86□□□□□ -1.95
TNFAIP3-201ENST00000237289 PRM1P04553 51 aa2.84□□□□□ -1.95
TNFAIP3-201ENST00000237289 KRTAP4-11Q9BYQ6 195 aa2.84□□□□□ -1.96
TNFAIP3-201ENST00000237289 AHNAK2Q8IVF2 5795 aa2.81□□□□□ -1.96
TNFAIP3-201ENST00000237289 LCE1BQ5T7P3 118 aa2.77□□□□□ -1.97
TNFAIP3-201ENST00000237289 KRTAP4-12Q9BQ66 201 aa2.75□□□□□ -1.97
TNFAIP3-201ENST00000237289 KRTAP5-10Q6L8G5 202 aa2.72□□□□□ -1.97
TNFAIP3-201ENST00000237289 KRTAP9-9Q9BYP9 154 aa2.69□□□□□ -1.98
TNFAIP3-201ENST00000237289 LCE1EQ5T753 118 aa2.67□□□□□ -1.98
TNFAIP3-201ENST00000237289 MUC19Q7Z5P9 8384 aa2.62□□□□□ -1.99
TNFAIP3-201ENST00000237289 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
TNFAIP3-201ENST00000237289 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
TNFAIP3-201ENST00000237289 KRTAP5-1Q6L8H4 278 aa2.52□□□□□ -2.01
TNFAIP3-201ENST00000237289 MUC5ACP98088 5654 aa2.5□□□□□ -2.01
TNFAIP3-201ENST00000237289 LCE1CQ5T751 118 aa2.44□□□□□ -2.02
TNFAIP3-201ENST00000237289 KRTAP4-2Q9BYR5 136 aa2.39□□□□□ -2.03
TNFAIP3-201ENST00000237289 AHNAKQ09666 5890 aaKnown RBP2.3□□□□□ -2.04
TNFAIP3-201ENST00000237289 MUC5BQ9HC84 5762 aaPredicted RBP2.28□□□□□ -2.04
TNFAIP3-201ENST00000237289 LCE1FQ5T754 118 aa2.17□□□□□ -2.06
TNFAIP3-201ENST00000237289 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.17□□□□□ -2.06
TNFAIP3-201ENST00000237289 KRTAP5-11Q6L8G4 156 aa2.16□□□□□ -2.06
TNFAIP3-201ENST00000237289 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
TNFAIP3-201ENST00000237289 KRTAP4-4Q9BYR3 166 aa2.05□□□□□ -2.08
TNFAIP3-201ENST00000237289 PHGR1C9JFL3 82 aa1.85□□□□□ -2.11
TNFAIP3-201ENST00000237289 KRTAP21-1Q3LI58 79 aa1.35□□□□□ -2.19
TNFAIP3-201ENST00000237289 MUC16Q8WXI7 14507 aa1.16□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 12.8 ms