RNA–Protein interactions for RNA: ENST00000237247.10

SGIP1-201, Transcript of SH3 domain GRB2 like endophilin interacting protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SGIP1, Length 3,997 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGIP1-201ENST00000237247 KRTAP19-6Q3LI70 58 aa2.29□□□□□ -2.04
SGIP1-201ENST00000237247 KRTAP19-5Q3LI72 72 aa2.26□□□□□ -2.05
SGIP1-201ENST00000237247 KRTAP4-12Q9BQ66 201 aa2.25□□□□□ -2.05
SGIP1-201ENST00000237247 KMT2DO14686 5537 aa2.22□□□□□ -2.05
SGIP1-201ENST00000237247 KRTAP4-8A0A0G2JLE6 195 aa2.22□□□□□ -2.05
SGIP1-201ENST00000237247 KRTAP5-3Q6L8H2 238 aa2.22□□□□□ -2.05
SGIP1-201ENST00000237247 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
SGIP1-201ENST00000237247 KRTAP9-9Q9BYP9 154 aa2.21□□□□□ -2.06
SGIP1-201ENST00000237247 KRTAP9-4Q9BYQ2 154 aa2.21□□□□□ -2.06
SGIP1-201ENST00000237247 KRTAP9-7A8MTY7 169 aa2.21□□□□□ -2.06
SGIP1-201ENST00000237247 KRTAP4-7Q9BYR0 210 aa2.21□□□□□ -2.06
SGIP1-201ENST00000237247 KRTAP2-2Q9BYT5 123 aa2.21□□□□□ -2.06
SGIP1-201ENST00000237247 KRTAP9-6A8MVA2 160 aa2.18□□□□□ -2.06
SGIP1-201ENST00000237247 KRTAP19-7Q3SYF9 63 aa2.18□□□□□ -2.06
SGIP1-201ENST00000237247 LCE1DQ5T752 114 aa2.17□□□□□ -2.06
SGIP1-201ENST00000237247 KRTAP4-2Q9BYR5 136 aa2.16□□□□□ -2.06
SGIP1-201ENST00000237247 LCE4AQ5TA78 99 aa2.14□□□□□ -2.07
SGIP1-201ENST00000237247 MT1LQ93083 61 aa2.13□□□□□ -2.07
SGIP1-201ENST00000237247 KRTAP5-9P26371 169 aa2.12□□□□□ -2.07
SGIP1-201ENST00000237247 MT1EP04732 61 aa2.12□□□□□ -2.07
SGIP1-201ENST00000237247 KRTAP4-9Q9BYQ8 210 aa2.1□□□□□ -2.07
SGIP1-201ENST00000237247 KRTAP6-3Q3LI67 103 aa2.08□□□□□ -2.08
SGIP1-201ENST00000237247 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
SGIP1-201ENST00000237247 KRTAP12-4P60329 112 aa2.04□□□□□ -2.08
SGIP1-201ENST00000237247 SYNE2Q8WXH0 6885 aaKnown RBP2.03□□□□□ -2.08
SGIP1-201ENST00000237247 KRTAP5-5Q701N2 237 aaPredicted RBP2.02□□□□□ -2.09
SGIP1-201ENST00000237247 LCE1AQ5T7P2 110 aa2.01□□□□□ -2.09
SGIP1-201ENST00000237247 MACF1Q9UPN3 7388 aaKnown RBP2.01□□□□□ -2.09
SGIP1-201ENST00000237247 LCE5AQ5TCM9 118 aa2□□□□□ -2.09
SGIP1-201ENST00000237247 MT1GP13640 62 aa1.97□□□□□ -2.09
SGIP1-201ENST00000237247 MT1MQ8N339 61 aa1.97□□□□□ -2.09
SGIP1-201ENST00000237247 KRTAP19-3Q7Z4W3 81 aa1.96□□□□□ -2.1
SGIP1-201ENST00000237247 MDN1Q9NU22 5596 aa1.95□□□□□ -2.1
SGIP1-201ENST00000237247 KRTAP20-1Q3LI63 56 aa1.93□□□□□ -2.1
SGIP1-201ENST00000237247 KRTAP4-11Q9BYQ6 195 aa1.93□□□□□ -2.1
SGIP1-201ENST00000237247 MT1AP04731 61 aa1.92□□□□□ -2.1
SGIP1-201ENST00000237247 NEBP20929 6669 aa1.92□□□□□ -2.1
SGIP1-201ENST00000237247 SPRR2FQ96RM1 72 aa1.89□□□□□ -2.11
SGIP1-201ENST00000237247 KRTAP4-3Q9BYR4 195 aa1.88□□□□□ -2.11
SGIP1-201ENST00000237247 LCE1EQ5T753 118 aa1.87□□□□□ -2.11
SGIP1-201ENST00000237247 KRTAP5-4Q6L8H1 288 aa1.87□□□□□ -2.11
SGIP1-201ENST00000237247 PRM1P04553 51 aa1.86□□□□□ -2.11
SGIP1-201ENST00000237247 SPRR2EP22531 72 aa1.82□□□□□ -2.12
SGIP1-201ENST00000237247 SPRR2BP35325 72 aa1.82□□□□□ -2.12
SGIP1-201ENST00000237247 SPRR2AP35326 72 aa1.82□□□□□ -2.12
SGIP1-201ENST00000237247 SYNE1Q8NF91 8797 aaKnown RBP1.81□□□□□ -2.12
SGIP1-201ENST00000237247 MUC19Q7Z5P9 8384 aa1.78□□□□□ -2.12
SGIP1-201ENST00000237247 GPR98Q8WXG9 6306 aa1.78□□□□□ -2.13
SGIP1-201ENST00000237247 LCE3EQ5T5B0 92 aa1.77□□□□□ -2.13
SGIP1-201ENST00000237247 KRTAP6-1Q3LI64 71 aa1.76□□□□□ -2.13
SGIP1-201ENST00000237247 LCE3DQ9BYE3 92 aa1.76□□□□□ -2.13
SGIP1-201ENST00000237247 DSTQ03001 7570 aaKnown RBP1.76□□□□□ -2.13
SGIP1-201ENST00000237247 SPRR2DP22532 72 aa1.75□□□□□ -2.13
SGIP1-201ENST00000237247 KRTAP5-2Q701N4 177 aa1.75□□□□□ -2.13
SGIP1-201ENST00000237247 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.74□□□□□ -2.13
SGIP1-201ENST00000237247 LCE1FQ5T754 118 aa1.72□□□□□ -2.13
SGIP1-201ENST00000237247 KRTAP6-2Q3LI66 62 aa1.67□□□□□ -2.14
SGIP1-201ENST00000237247 HMCN1Q96RW7 5635 aa1.62□□□□□ -2.15
SGIP1-201ENST00000237247 MT3P25713 68 aa1.61□□□□□ -2.15
SGIP1-201ENST00000237247 MT4P47944 62 aa1.53□□□□□ -2.16
SGIP1-201ENST00000237247 KRTAP20-2Q3LI61 65 aa1.53□□□□□ -2.16
SGIP1-201ENST00000237247 KRTAP5-7Q6L8G8 165 aa1.53□□□□□ -2.16
SGIP1-201ENST00000237247 KRTAP5-10Q6L8G5 202 aa1.51□□□□□ -2.17
SGIP1-201ENST00000237247 AHNAK2Q8IVF2 5795 aa1.5□□□□□ -2.17
SGIP1-201ENST00000237247 KRTAP5-1Q6L8H4 278 aa1.45□□□□□ -2.18
SGIP1-201ENST00000237247 KRTAP5-8O75690 187 aa1.42□□□□□ -2.18
SGIP1-201ENST00000237247 MUC5BQ9HC84 5762 aaPredicted RBP1.41□□□□□ -2.18
SGIP1-201ENST00000237247 LCE1CQ5T751 118 aa1.34□□□□□ -2.19
SGIP1-201ENST00000237247 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
SGIP1-201ENST00000237247 KRTAP5-11Q6L8G4 156 aa1.34□□□□□ -2.19
SGIP1-201ENST00000237247 AHNAKQ09666 5890 aaKnown RBP1.34□□□□□ -2.2
SGIP1-201ENST00000237247 MUC5ACP98088 5654 aa1.33□□□□□ -2.2
SGIP1-201ENST00000237247 KRTAP21-1Q3LI58 79 aa1.32□□□□□ -2.2
SGIP1-201ENST00000237247 KRTAP4-4Q9BYR3 166 aa1.27□□□□□ -2.21
SGIP1-201ENST00000237247 KRTAP21-2Q3LI59 83 aa1.24□□□□□ -2.21
SGIP1-201ENST00000237247 PHGR1C9JFL3 82 aa1.03□□□□□ -2.25
SGIP1-201ENST00000237247 MUC16Q8WXI7 14507 aa0.79□□□□□ -2.28
Retrieved 77 of 20,778 RNA–protein pairs in 562.3 ms