RNA–Protein interactions for RNA: ENST00000233114.12

MDH1-201, Transcript of malate dehydrogenase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MDH1, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-201ENST00000233114 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
MDH1-201ENST00000233114 MT1BP07438 61 aa4.01□□□□□ -1.77
MDH1-201ENST00000233114 LCE3AQ5TA76 89 aa4□□□□□ -1.77
MDH1-201ENST00000233114 KRTAP5-4Q6L8H1 288 aa4□□□□□ -1.77
MDH1-201ENST00000233114 FAT4Q6V0I7 4981 aa3.99□□□□□ -1.77
MDH1-201ENST00000233114 UBR4Q5T4S7 5183 aa3.99□□□□□ -1.77
MDH1-201ENST00000233114 KRTAP8-1Q8IUC2 63 aa3.98□□□□□ -1.77
MDH1-201ENST00000233114 KRTAP10-5P60370 271 aa3.97□□□□□ -1.77
MDH1-201ENST00000233114 KRTAP4-4Q9BYR3 166 aa3.97□□□□□ -1.77
MDH1-201ENST00000233114 KRTAP5-9P26371 169 aa3.97□□□□□ -1.77
MDH1-201ENST00000233114 MT1XP80297 61 aa3.97□□□□□ -1.77
MDH1-201ENST00000233114 MT3P25713 68 aa3.96□□□□□ -1.78
MDH1-201ENST00000233114 KRTAP10-12P60413 245 aa3.9□□□□□ -1.78
MDH1-201ENST00000233114 KRTAP12-3P60328 96 aa3.84□□□□□ -1.79
MDH1-201ENST00000233114 KRTAP9-6A8MVA2 160 aa3.8□□□□□ -1.8
MDH1-201ENST00000233114 KRTAP19-5Q3LI72 72 aa3.66□□□□□ -1.82
MDH1-201ENST00000233114 OBSCNQ5VST9 7968 aa3.63□□□□□ -1.83
MDH1-201ENST00000233114 LCE3CQ5T5A8 94 aa3.62□□□□□ -1.83
MDH1-201ENST00000233114 KRTAP19-7Q3SYF9 63 aa3.53□□□□□ -1.84
MDH1-201ENST00000233114 USH2AO75445 5202 aa3.52□□□□□ -1.85
MDH1-201ENST00000233114 LCE1FQ5T754 118 aa3.51□□□□□ -1.85
MDH1-201ENST00000233114 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
MDH1-201ENST00000233114 KRTAP19-6Q3LI70 58 aa3.49□□□□□ -1.85
MDH1-201ENST00000233114 MT1EP04732 61 aa3.46□□□□□ -1.86
MDH1-201ENST00000233114 MT1LQ93083 61 aa3.45□□□□□ -1.86
MDH1-201ENST00000233114 SSPOA2VEC9 5147 aa3.41□□□□□ -1.86
MDH1-201ENST00000233114 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
MDH1-201ENST00000233114 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
MDH1-201ENST00000233114 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
MDH1-201ENST00000233114 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
MDH1-201ENST00000233114 KMT2DO14686 5537 aa3.33□□□□□ -1.88
MDH1-201ENST00000233114 MT1GP13640 62 aa3.27□□□□□ -1.89
MDH1-201ENST00000233114 KRTAP19-3Q7Z4W3 81 aa3.26□□□□□ -1.89
MDH1-201ENST00000233114 MT1MQ8N339 61 aa3.23□□□□□ -1.89
MDH1-201ENST00000233114 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
MDH1-201ENST00000233114 SPRR2FQ96RM1 72 aa3.1□□□□□ -1.91
MDH1-201ENST00000233114 KRTAP6-3Q3LI67 103 aa3.06□□□□□ -1.92
MDH1-201ENST00000233114 LCE3EQ5T5B0 92 aa3.05□□□□□ -1.92
MDH1-201ENST00000233114 FSIP2Q5CZC0 6907 aa3.03□□□□□ -1.92
MDH1-201ENST00000233114 MUC12Q9UKN1 5478 aa3□□□□□ -1.93
MDH1-201ENST00000233114 CRCT1Q9UGL9 99 aa3□□□□□ -1.93
MDH1-201ENST00000233114 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
MDH1-201ENST00000233114 KRTAP12-4P60329 112 aa2.95□□□□□ -1.94
MDH1-201ENST00000233114 MT1AP04731 61 aa2.94□□□□□ -1.94
MDH1-201ENST00000233114 HMCN1Q96RW7 5635 aa2.89□□□□□ -1.95
MDH1-201ENST00000233114 MACF1Q9UPN3 7388 aaKnown RBP2.89□□□□□ -1.95
MDH1-201ENST00000233114 KRTAP6-1Q3LI64 71 aa2.88□□□□□ -1.95
MDH1-201ENST00000233114 SPRR2EP22531 72 aa2.85□□□□□ -1.95
MDH1-201ENST00000233114 SPRR2BP35325 72 aa2.85□□□□□ -1.95
MDH1-201ENST00000233114 SPRR2AP35326 72 aa2.85□□□□□ -1.95
MDH1-201ENST00000233114 LCE1CQ5T751 118 aa2.84□□□□□ -1.95
MDH1-201ENST00000233114 LCE1BQ5T7P3 118 aa2.84□□□□□ -1.95
MDH1-201ENST00000233114 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
MDH1-201ENST00000233114 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
MDH1-201ENST00000233114 DSTQ03001 7570 aaKnown RBP2.76□□□□□ -1.97
MDH1-201ENST00000233114 SPRR2DP22532 72 aa2.74□□□□□ -1.97
MDH1-201ENST00000233114 MDN1Q9NU22 5596 aa2.73□□□□□ -1.97
MDH1-201ENST00000233114 SYNE2Q8WXH0 6885 aaKnown RBP2.72□□□□□ -1.97
MDH1-201ENST00000233114 SYNE1Q8NF91 8797 aaKnown RBP2.61□□□□□ -1.99
MDH1-201ENST00000233114 KRTAP6-2Q3LI66 62 aa2.59□□□□□ -2
MDH1-201ENST00000233114 PRM1P04553 51 aa2.54□□□□□ -2
MDH1-201ENST00000233114 NEBP20929 6669 aa2.49□□□□□ -2.01
MDH1-201ENST00000233114 MUC19Q7Z5P9 8384 aa2.44□□□□□ -2.02
MDH1-201ENST00000233114 KRTAP20-2Q3LI61 65 aa2.39□□□□□ -2.03
MDH1-201ENST00000233114 KRTAP20-1Q3LI63 56 aa2.38□□□□□ -2.03
MDH1-201ENST00000233114 MT4P47944 62 aa2.34□□□□□ -2.04
MDH1-201ENST00000233114 KRTAP5-7Q6L8G8 165 aa2.32□□□□□ -2.04
MDH1-201ENST00000233114 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
MDH1-201ENST00000233114 MUC5ACP98088 5654 aa2.11□□□□□ -2.07
MDH1-201ENST00000233114 KRTAP5-10Q6L8G5 202 aa2.09□□□□□ -2.08
MDH1-201ENST00000233114 KRTAP21-2Q3LI59 83 aa2.06□□□□□ -2.08
MDH1-201ENST00000233114 AHNAK2Q8IVF2 5795 aa2.01□□□□□ -2.09
MDH1-201ENST00000233114 AHNAKQ09666 5890 aaKnown RBP1.76□□□□□ -2.13
MDH1-201ENST00000233114 MUC5BQ9HC84 5762 aaPredicted RBP1.71□□□□□ -2.14
MDH1-201ENST00000233114 KRTAP21-1Q3LI58 79 aa1.65□□□□□ -2.15
MDH1-201ENST00000233114 PHGR1C9JFL3 82 aa1.53□□□□□ -2.16
MDH1-201ENST00000233114 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 11.3 ms