RNA–Protein interactions for RNA: ENST00000232888.6

RRP9-201, Transcript of ribosomal RNA processing 9, U3 small nucleolar RNA binding protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP9, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP9-201ENST00000232888 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.25□□□□□ -1.09
RRP9-201ENST00000232888 MT1GP13640 62 aa8.25□□□□□ -1.09
RRP9-201ENST00000232888 KRTAP6-3Q3LI67 103 aa8.15□□□□□ -1.1
RRP9-201ENST00000232888 SYNE2Q8WXH0 6885 aaKnown RBP8.14□□□□□ -1.11
RRP9-201ENST00000232888 LCE5AQ5TCM9 118 aa8.14□□□□□ -1.11
RRP9-201ENST00000232888 MT1MQ8N339 61 aa8.11□□□□□ -1.11
RRP9-201ENST00000232888 KRTAP4-7Q9BYR0 210 aa8.11□□□□□ -1.11
RRP9-201ENST00000232888 MUC12Q9UKN1 5478 aa8.11□□□□□ -1.11
RRP9-201ENST00000232888 NDUFAF8A1L188 74 aa8.07□□□□□ -1.12
RRP9-201ENST00000232888 LCE1AQ5T7P2 110 aa8.01□□□□□ -1.13
RRP9-201ENST00000232888 SPRR2EP22531 72 aa7.94□□□□□ -1.14
RRP9-201ENST00000232888 SPRR2BP35325 72 aa7.94□□□□□ -1.14
RRP9-201ENST00000232888 SPRR2AP35326 72 aa7.94□□□□□ -1.14
RRP9-201ENST00000232888 KRTAP9-6A8MVA2 160 aa7.89□□□□□ -1.15
RRP9-201ENST00000232888 KRTAP4-3Q9BYR4 195 aa7.86□□□□□ -1.15
RRP9-201ENST00000232888 MDN1Q9NU22 5596 aa7.8□□□□□ -1.16
RRP9-201ENST00000232888 KRTAP9-7A8MTY7 169 aa7.76□□□□□ -1.17
RRP9-201ENST00000232888 SPRR2DP22532 72 aa7.66□□□□□ -1.18
RRP9-201ENST00000232888 LOC100996750A0A140TA64 210 aa7.61□□□□□ -1.19
RRP9-201ENST00000232888 NEBP20929 6669 aa7.48□□□□□ -1.21
RRP9-201ENST00000232888 KRTAP2-3P0C7H8 128 aa7.4□□□□□ -1.22
RRP9-201ENST00000232888 KRTAP2-4Q9BYR9 128 aa7.4□□□□□ -1.22
RRP9-201ENST00000232888 KRTAP2-1Q9BYU5 128 aa7.4□□□□□ -1.22
RRP9-201ENST00000232888 DSTQ03001 7570 aaKnown RBP7.4□□□□□ -1.23
RRP9-201ENST00000232888 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
RRP9-201ENST00000232888 KRTAP5-5Q701N2 237 aaPredicted RBP7.32□□□□□ -1.24
RRP9-201ENST00000232888 H3BS24 57 aa7.22□□□□□ -1.25
RRP9-201ENST00000232888 MT1AP04731 61 aa7.22□□□□□ -1.25
RRP9-201ENST00000232888 A0A0A0MQY5 61 aa7.2□□□□□ -1.26
RRP9-201ENST00000232888 KRTAP6-1Q3LI64 71 aa7.09□□□□□ -1.27
RRP9-201ENST00000232888 KRTAP5-4Q6L8H1 288 aa6.98□□□□□ -1.29
RRP9-201ENST00000232888 KRTAP2-2Q9BYT5 123 aa6.96□□□□□ -1.29
RRP9-201ENST00000232888 KRTAP20-1Q3LI63 56 aa6.92□□□□□ -1.3
RRP9-201ENST00000232888 LCE4AQ5TA78 99 aa6.86□□□□□ -1.31
RRP9-201ENST00000232888 KRTAP9-4Q9BYQ2 154 aa6.86□□□□□ -1.31
RRP9-201ENST00000232888 KRTAP12-4P60329 112 aa6.82□□□□□ -1.32
RRP9-201ENST00000232888 SYNE1Q8NF91 8797 aaKnown RBP6.78□□□□□ -1.32
RRP9-201ENST00000232888 INE1O15225 51 aa6.78□□□□□ -1.32
RRP9-201ENST00000232888 MT4P47944 62 aa6.59□□□□□ -1.35
RRP9-201ENST00000232888 MT3P25713 68 aa6.56□□□□□ -1.36
RRP9-201ENST00000232888 KRTAP4-6Q9BYQ5 205 aa6.56□□□□□ -1.36
RRP9-201ENST00000232888 KRTAP6-2Q3LI66 62 aa6.52□□□□□ -1.36
RRP9-201ENST00000232888 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
RRP9-201ENST00000232888 KRTAP20-2Q3LI61 65 aa6.48□□□□□ -1.37
RRP9-201ENST00000232888 KRTAP4-9Q9BYQ8 210 aa6.48□□□□□ -1.37
RRP9-201ENST00000232888 KRTAP5-2Q701N4 177 aa6.34□□□□□ -1.39
RRP9-201ENST00000232888 LCE3DQ9BYE3 92 aa6.34□□□□□ -1.39
RRP9-201ENST00000232888 HMCN1Q96RW7 5635 aa6.33□□□□□ -1.4
RRP9-201ENST00000232888 KRTAP5-3Q6L8H2 238 aa6.26□□□□□ -1.41
RRP9-201ENST00000232888 LCE3EQ5T5B0 92 aa6.18□□□□□ -1.42
RRP9-201ENST00000232888 OBSCNQ5VST9 7968 aa5.84□□□□□ -1.47
RRP9-201ENST00000232888 LCE1EQ5T753 118 aa5.71□□□□□ -1.5
RRP9-201ENST00000232888 KRTAP4-11Q9BYQ6 195 aa5.62□□□□□ -1.51
RRP9-201ENST00000232888 AHNAK2Q8IVF2 5795 aa5.58□□□□□ -1.52
RRP9-201ENST00000232888 GPR98Q8WXG9 6306 aa5.45□□□□□ -1.54
RRP9-201ENST00000232888 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
RRP9-201ENST00000232888 KRTAP5-8O75690 187 aa5.38□□□□□ -1.55
RRP9-201ENST00000232888 PRM1P04553 51 aa5.38□□□□□ -1.55
RRP9-201ENST00000232888 KRTAP5-10Q6L8G5 202 aa5.36□□□□□ -1.55
RRP9-201ENST00000232888 LCE1CQ5T751 118 aa5.3□□□□□ -1.56
RRP9-201ENST00000232888 LCE1BQ5T7P3 118 aa5.3□□□□□ -1.56
RRP9-201ENST00000232888 KRTAP5-7Q6L8G8 165 aa5.3□□□□□ -1.56
RRP9-201ENST00000232888 KRTAP4-2Q9BYR5 136 aa5.25□□□□□ -1.57
RRP9-201ENST00000232888 MUC5ACP98088 5654 aa5.17□□□□□ -1.58
RRP9-201ENST00000232888 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.99□□□□□ -1.61
RRP9-201ENST00000232888 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
RRP9-201ENST00000232888 KRTAP5-11Q6L8G4 156 aa4.66□□□□□ -1.66
RRP9-201ENST00000232888 KRTAP21-2Q3LI59 83 aa4.65□□□□□ -1.66
RRP9-201ENST00000232888 MUC5BQ9HC84 5762 aaPredicted RBP4.58□□□□□ -1.68
RRP9-201ENST00000232888 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
RRP9-201ENST00000232888 KRTAP4-12Q9BQ66 201 aa4.27□□□□□ -1.73
RRP9-201ENST00000232888 LCE1FQ5T754 118 aa4.23□□□□□ -1.73
RRP9-201ENST00000232888 KRTAP4-4Q9BYR3 166 aa4.06□□□□□ -1.76
RRP9-201ENST00000232888 PHGR1C9JFL3 82 aa3.99□□□□□ -1.77
RRP9-201ENST00000232888 MUC19Q7Z5P9 8384 aa3.38□□□□□ -1.87
RRP9-201ENST00000232888 KRTAP21-1Q3LI58 79 aa3.33□□□□□ -1.88
RRP9-201ENST00000232888 MUC16Q8WXI7 14507 aa2.56□□□□□ -2
Retrieved 77 of 20,778 RNA–protein pairs in 11.6 ms