RNA–Protein interactions for RNA: ENST00000231238.9

TTC1-201, Transcript of tetratricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TTC1, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC1-201ENST00000231238 KRTAP19-8Q3LI54 63 aa4.18□□□□□ -1.74
TTC1-201ENST00000231238 MT1BP07438 61 aa4.11□□□□□ -1.75
TTC1-201ENST00000231238 LCE3EQ5T5B0 92 aa4.11□□□□□ -1.75
TTC1-201ENST00000231238 KRTAP4-4Q9BYR3 166 aa4.09□□□□□ -1.75
TTC1-201ENST00000231238 C10orf95Q9H7T3 257 aa4.09□□□□□ -1.75
TTC1-201ENST00000231238 PRO2289Q9P1D8 64 aa4.08□□□□□ -1.76
TTC1-201ENST00000231238 TNP1P09430 55 aa4.06□□□□□ -1.76
TTC1-201ENST00000231238 KRTAP5-4Q6L8H1 288 aa4.06□□□□□ -1.76
TTC1-201ENST00000231238 KRTAP25-1Q3LHN0 102 aa4.05□□□□□ -1.76
TTC1-201ENST00000231238 USH2AO75445 5202 aa4□□□□□ -1.77
TTC1-201ENST00000231238 MT1XP80297 61 aa3.98□□□□□ -1.77
TTC1-201ENST00000231238 PP632Q6XCG6 107 aa3.92□□□□□ -1.78
TTC1-201ENST00000231238 KRTAP5-9P26371 169 aa3.92□□□□□ -1.78
TTC1-201ENST00000231238 KRTAP19-6Q3LI70 58 aa3.86□□□□□ -1.79
TTC1-201ENST00000231238 FSIP2Q5CZC0 6907 aa3.86□□□□□ -1.79
TTC1-201ENST00000231238 SSPOA2VEC9 5147 aa3.83□□□□□ -1.8
TTC1-201ENST00000231238 LCE3AQ5TA76 89 aa3.82□□□□□ -1.8
TTC1-201ENST00000231238 OBSCNQ5VST9 7968 aa3.82□□□□□ -1.8
TTC1-201ENST00000231238 CRCT1Q9UGL9 99 aa3.73□□□□□ -1.81
TTC1-201ENST00000231238 KRTAP8-1Q8IUC2 63 aa3.71□□□□□ -1.82
TTC1-201ENST00000231238 FCGBPQ9Y6R7 5405 aaPredicted RBP3.7□□□□□ -1.82
TTC1-201ENST00000231238 LUZP6Q538Z0 58 aa3.7□□□□□ -1.82
TTC1-201ENST00000231238 KRTAP12-3P60328 96 aa3.69□□□□□ -1.82
TTC1-201ENST00000231238 KRTAP4-3Q9BYR4 195 aa3.66□□□□□ -1.82
TTC1-201ENST00000231238 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
TTC1-201ENST00000231238 KMT2DO14686 5537 aa3.63□□□□□ -1.83
TTC1-201ENST00000231238 MACF1Q9UPN3 7388 aaKnown RBP3.56□□□□□ -1.84
TTC1-201ENST00000231238 KRTAP19-7Q3SYF9 63 aa3.54□□□□□ -1.84
TTC1-201ENST00000231238 KRTAP5-5Q701N2 237 aaPredicted RBP3.52□□□□□ -1.85
TTC1-201ENST00000231238 MT1EP04732 61 aa3.51□□□□□ -1.85
TTC1-201ENST00000231238 SPRR2FQ96RM1 72 aa3.51□□□□□ -1.85
TTC1-201ENST00000231238 SYNE2Q8WXH0 6885 aaKnown RBP3.46□□□□□ -1.86
TTC1-201ENST00000231238 MT1LQ93083 61 aa3.44□□□□□ -1.86
TTC1-201ENST00000231238 KRTAP19-3Q7Z4W3 81 aa3.4□□□□□ -1.87
TTC1-201ENST00000231238 MT1GP13640 62 aa3.37□□□□□ -1.87
TTC1-201ENST00000231238 MUC12Q9UKN1 5478 aa3.37□□□□□ -1.87
TTC1-201ENST00000231238 SPRR5A0A1B0GTR4 108 aa3.36□□□□□ -1.87
TTC1-201ENST00000231238 KRTAP6-3Q3LI67 103 aa3.35□□□□□ -1.87
TTC1-201ENST00000231238 SPRR2EP22531 72 aa3.34□□□□□ -1.88
TTC1-201ENST00000231238 SPRR2BP35325 72 aa3.34□□□□□ -1.88
TTC1-201ENST00000231238 SPRR2AP35326 72 aa3.34□□□□□ -1.88
TTC1-201ENST00000231238 KRTAP5-2Q701N4 177 aa3.33□□□□□ -1.88
TTC1-201ENST00000231238 LCE3DQ9BYE3 92 aa3.32□□□□□ -1.88
TTC1-201ENST00000231238 MT1MQ8N339 61 aa3.31□□□□□ -1.88
TTC1-201ENST00000231238 MDN1Q9NU22 5596 aa3.28□□□□□ -1.88
TTC1-201ENST00000231238 LCE1CQ5T751 118 aa3.28□□□□□ -1.88
TTC1-201ENST00000231238 LCE1BQ5T7P3 118 aa3.28□□□□□ -1.88
TTC1-201ENST00000231238 SPRR2DP22532 72 aa3.22□□□□□ -1.89
TTC1-201ENST00000231238 DSTQ03001 7570 aaKnown RBP3.17□□□□□ -1.9
TTC1-201ENST00000231238 NEBP20929 6669 aa3.14□□□□□ -1.91
TTC1-201ENST00000231238 INE1O15225 51 aa2.97□□□□□ -1.93
TTC1-201ENST00000231238 KRTAP2-3P0C7H8 128 aa2.96□□□□□ -1.94
TTC1-201ENST00000231238 KRTAP2-4Q9BYR9 128 aa2.96□□□□□ -1.94
TTC1-201ENST00000231238 MT1AP04731 61 aa2.94□□□□□ -1.94
TTC1-201ENST00000231238 KRTAP2-1Q9BYU5 128 aa2.94□□□□□ -1.94
TTC1-201ENST00000231238 KRTAP20-1Q3LI63 56 aa2.93□□□□□ -1.94
TTC1-201ENST00000231238 KRTAP6-1Q3LI64 71 aa2.9□□□□□ -1.95
TTC1-201ENST00000231238 SYNE1Q8NF91 8797 aaKnown RBP2.85□□□□□ -1.95
TTC1-201ENST00000231238 KRTAP12-4P60329 112 aa2.84□□□□□ -1.95
TTC1-201ENST00000231238 MT4P47944 62 aa2.79□□□□□ -1.96
TTC1-201ENST00000231238 KRTAP5-8O75690 187 aa2.77□□□□□ -1.97
TTC1-201ENST00000231238 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
TTC1-201ENST00000231238 MUC19Q7Z5P9 8384 aa2.74□□□□□ -1.97
TTC1-201ENST00000231238 KRTAP6-2Q3LI66 62 aa2.69□□□□□ -1.98
TTC1-201ENST00000231238 KRTAP20-2Q3LI61 65 aa2.66□□□□□ -1.98
TTC1-201ENST00000231238 HMCN1Q96RW7 5635 aa2.65□□□□□ -1.99
TTC1-201ENST00000231238 GPR98Q8WXG9 6306 aa2.56□□□□□ -2
TTC1-201ENST00000231238 AHNAK2Q8IVF2 5795 aa2.37□□□□□ -2.03
TTC1-201ENST00000231238 KRTAP21-2Q3LI59 83 aa2.36□□□□□ -2.03
TTC1-201ENST00000231238 KRTAP5-10Q6L8G5 202 aa2.31□□□□□ -2.04
TTC1-201ENST00000231238 PRM1P04553 51 aa2.2□□□□□ -2.06
TTC1-201ENST00000231238 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
TTC1-201ENST00000231238 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
TTC1-201ENST00000231238 MUC5BQ9HC84 5762 aaPredicted RBP1.94□□□□□ -2.1
TTC1-201ENST00000231238 PHGR1C9JFL3 82 aa1.61□□□□□ -2.15
TTC1-201ENST00000231238 KRTAP21-1Q3LI58 79 aa1.3□□□□□ -2.2
TTC1-201ENST00000231238 MUC16Q8WXI7 14507 aa1.19□□□□□ -2.22
Retrieved 77 of 20,778 RNA–protein pairs in 10.8 ms