RNA–Protein interactions for RNA: ENST00000229854.11

MCM3-201, Transcript of minichromosome maintenance complex component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCM3, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM3-201ENST00000229854 KRTAP19-6Q3LI70 58 aa3.41□□□□□ -1.86
MCM3-201ENST00000229854 MT1EP04732 61 aa3.41□□□□□ -1.86
MCM3-201ENST00000229854 DSTQ03001 7570 aaKnown RBP3.4□□□□□ -1.87
MCM3-201ENST00000229854 MT1LQ93083 61 aa3.4□□□□□ -1.87
MCM3-201ENST00000229854 FCGBPQ9Y6R7 5405 aaPredicted RBP3.35□□□□□ -1.87
MCM3-201ENST00000229854 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
MCM3-201ENST00000229854 CRCT1Q9UGL9 99 aa3.33□□□□□ -1.88
MCM3-201ENST00000229854 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
MCM3-201ENST00000229854 KRTAP9-2Q9BYQ4 174 aa3.3□□□□□ -1.88
MCM3-201ENST00000229854 KRTAP4-3Q9BYR4 195 aa3.29□□□□□ -1.88
MCM3-201ENST00000229854 MT1GP13640 62 aa3.28□□□□□ -1.88
MCM3-201ENST00000229854 MUC12Q9UKN1 5478 aa3.22□□□□□ -1.89
MCM3-201ENST00000229854 KRTAP19-3Q7Z4W3 81 aa3.18□□□□□ -1.9
MCM3-201ENST00000229854 MT1MQ8N339 61 aa3.18□□□□□ -1.9
MCM3-201ENST00000229854 KRTAP9-6A0A140TA67 174 aa3.17□□□□□ -1.9
MCM3-201ENST00000229854 KRTAP4-9Q9BYQ8 210 aa3.16□□□□□ -1.9
MCM3-201ENST00000229854 LCE3BQ5TA77 95 aa3.16□□□□□ -1.9
MCM3-201ENST00000229854 LCE5AQ5TCM9 118 aa3.11□□□□□ -1.91
MCM3-201ENST00000229854 SYNE2Q8WXH0 6885 aaKnown RBP3.11□□□□□ -1.91
MCM3-201ENST00000229854 PRM1P04553 51 aa3.06□□□□□ -1.92
MCM3-201ENST00000229854 KRTAP9-7A8MTY7 169 aa3.06□□□□□ -1.92
MCM3-201ENST00000229854 MACF1Q9UPN3 7388 aaKnown RBP3.03□□□□□ -1.92
MCM3-201ENST00000229854 LCE3DQ9BYE3 92 aa3.02□□□□□ -1.93
MCM3-201ENST00000229854 LCE3EQ5T5B0 92 aa3□□□□□ -1.93
MCM3-201ENST00000229854 SPRR2FQ96RM1 72 aa2.99□□□□□ -1.93
MCM3-201ENST00000229854 MT1AP04731 61 aa2.97□□□□□ -1.93
MCM3-201ENST00000229854 KRTAP5-5Q701N2 237 aaPredicted RBP2.97□□□□□ -1.93
MCM3-201ENST00000229854 KRTAP5-9P26371 169 aa2.94□□□□□ -1.94
MCM3-201ENST00000229854 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
MCM3-201ENST00000229854 LCE1AQ5T7P2 110 aa2.88□□□□□ -1.95
MCM3-201ENST00000229854 MDN1Q9NU22 5596 aa2.88□□□□□ -1.95
MCM3-201ENST00000229854 KRTAP6-3Q3LI67 103 aa2.87□□□□□ -1.95
MCM3-201ENST00000229854 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.85□□□□□ -1.95
MCM3-201ENST00000229854 KRTAP6-2Q3LI66 62 aa2.84□□□□□ -1.95
MCM3-201ENST00000229854 SPRR2EP22531 72 aa2.74□□□□□ -1.97
MCM3-201ENST00000229854 SPRR2BP35325 72 aa2.74□□□□□ -1.97
MCM3-201ENST00000229854 SPRR2AP35326 72 aa2.74□□□□□ -1.97
MCM3-201ENST00000229854 KRTAP2-2Q9BYT5 123 aa2.72□□□□□ -1.97
MCM3-201ENST00000229854 KRTAP9-4Q9BYQ2 154 aa2.7□□□□□ -1.98
MCM3-201ENST00000229854 SPRR2DP22532 72 aa2.62□□□□□ -1.99
MCM3-201ENST00000229854 LCE1EQ5T753 118 aa2.59□□□□□ -1.99
MCM3-201ENST00000229854 NEBP20929 6669 aa2.58□□□□□ -2
MCM3-201ENST00000229854 KRTAP5-4Q6L8H1 288 aa2.56□□□□□ -2
MCM3-201ENST00000229854 MT3P25713 68 aa2.54□□□□□ -2
MCM3-201ENST00000229854 LCE1DQ5T752 114 aa2.48□□□□□ -2.01
MCM3-201ENST00000229854 KRTAP20-1Q3LI63 56 aa2.48□□□□□ -2.01
MCM3-201ENST00000229854 KRTAP5-2Q701N4 177 aa2.4□□□□□ -2.02
MCM3-201ENST00000229854 KRTAP4-6Q9BYQ5 205 aa2.36□□□□□ -2.03
MCM3-201ENST00000229854 MUC19Q7Z5P9 8384 aa2.36□□□□□ -2.03
MCM3-201ENST00000229854 KRTAP20-2Q3LI61 65 aa2.34□□□□□ -2.03
MCM3-201ENST00000229854 LCE4AQ5TA78 99 aa2.34□□□□□ -2.03
MCM3-201ENST00000229854 KRTAP4-11Q9BYQ6 195 aa2.31□□□□□ -2.04
MCM3-201ENST00000229854 KRTAP5-3Q6L8H2 238 aa2.28□□□□□ -2.04
MCM3-201ENST00000229854 HMCN1Q96RW7 5635 aa2.27□□□□□ -2.05
MCM3-201ENST00000229854 MT4P47944 62 aa2.27□□□□□ -2.05
MCM3-201ENST00000229854 LCE1FQ5T754 118 aa2.26□□□□□ -2.05
MCM3-201ENST00000229854 GPR98Q8WXG9 6306 aa2.25□□□□□ -2.05
MCM3-201ENST00000229854 MUC5ACP98088 5654 aa2.18□□□□□ -2.06
MCM3-201ENST00000229854 LCE1BQ5T7P3 118 aa2.12□□□□□ -2.07
MCM3-201ENST00000229854 KRTAP5-10Q6L8G5 202 aa2.11□□□□□ -2.07
MCM3-201ENST00000229854 KRTAP5-1Q6L8H4 278 aa2.08□□□□□ -2.08
MCM3-201ENST00000229854 AHNAK2Q8IVF2 5795 aa2.05□□□□□ -2.08
MCM3-201ENST00000229854 LCE1CQ5T751 118 aa2.03□□□□□ -2.08
MCM3-201ENST00000229854 KRTAP4-2Q9BYR5 136 aa2.03□□□□□ -2.08
MCM3-201ENST00000229854 KRTAP4-12Q9BQ66 201 aa2□□□□□ -2.09
MCM3-201ENST00000229854 KRTAP9-9Q9BYP9 154 aa1.97□□□□□ -2.09
MCM3-201ENST00000229854 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.96□□□□□ -2.1
MCM3-201ENST00000229854 KRTAP5-7Q6L8G8 165 aa1.92□□□□□ -2.1
MCM3-201ENST00000229854 KRTAP5-8O75690 187 aa1.89□□□□□ -2.11
MCM3-201ENST00000229854 KRTAP21-2Q3LI59 83 aa1.89□□□□□ -2.11
MCM3-201ENST00000229854 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
MCM3-201ENST00000229854 KRTAP4-4Q9BYR3 166 aa1.85□□□□□ -2.11
MCM3-201ENST00000229854 MUC5BQ9HC84 5762 aaPredicted RBP1.81□□□□□ -2.12
MCM3-201ENST00000229854 KRTAP5-11Q6L8G4 156 aa1.75□□□□□ -2.13
MCM3-201ENST00000229854 AHNAKQ09666 5890 aaKnown RBP1.75□□□□□ -2.13
MCM3-201ENST00000229854 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
MCM3-201ENST00000229854 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 74.7 ms