RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 LCE3CQ5T5A8 94 aa3.41□□□□□ -1.86
HLA-DOA-201ENST00000229829 KRTAP19-4Q3LI73 84 aa3.41□□□□□ -1.86
HLA-DOA-201ENST00000229829 KRTAP9-6A8MVA2 160 aa3.36□□□□□ -1.87
HLA-DOA-201ENST00000229829 KRTAP4-7Q9BYR0 210 aa3.35□□□□□ -1.87
HLA-DOA-201ENST00000229829 KRTAP2-2Q9BYT5 123 aa3.32□□□□□ -1.88
HLA-DOA-201ENST00000229829 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
HLA-DOA-201ENST00000229829 LCE1FQ5T754 118 aa3.29□□□□□ -1.88
HLA-DOA-201ENST00000229829 KRTAP9-7A8MTY7 169 aa3.28□□□□□ -1.88
HLA-DOA-201ENST00000229829 LCE1AQ5T7P2 110 aa3.27□□□□□ -1.89
HLA-DOA-201ENST00000229829 KRTAP9-9Q9BYP9 154 aa3.27□□□□□ -1.89
HLA-DOA-201ENST00000229829 DSTQ03001 7570 aaKnown RBP3.23□□□□□ -1.89
HLA-DOA-201ENST00000229829 LCE4AQ5TA78 99 aa3.23□□□□□ -1.89
HLA-DOA-201ENST00000229829 FCGBPQ9Y6R7 5405 aaPredicted RBP3.21□□□□□ -1.9
HLA-DOA-201ENST00000229829 MT1LQ93083 61 aa3.2□□□□□ -1.9
HLA-DOA-201ENST00000229829 MT1EP04732 61 aa3.2□□□□□ -1.9
HLA-DOA-201ENST00000229829 KRTAP2-3P0C7H8 128 aa3.19□□□□□ -1.9
HLA-DOA-201ENST00000229829 KRTAP2-4Q9BYR9 128 aa3.19□□□□□ -1.9
HLA-DOA-201ENST00000229829 KRTAP2-1Q9BYU5 128 aa3.19□□□□□ -1.9
HLA-DOA-201ENST00000229829 SYNE1Q8NF91 8797 aaKnown RBP3.18□□□□□ -1.9
HLA-DOA-201ENST00000229829 MUC12Q9UKN1 5478 aa3.17□□□□□ -1.9
HLA-DOA-201ENST00000229829 NEBP20929 6669 aa3.17□□□□□ -1.9
HLA-DOA-201ENST00000229829 KRTAP12-4P60329 112 aa3.15□□□□□ -1.9
HLA-DOA-201ENST00000229829 LOC100996750A0A140TA64 210 aa3.12□□□□□ -1.91
HLA-DOA-201ENST00000229829 KRTAP4-3Q9BYR4 195 aa3.12□□□□□ -1.91
HLA-DOA-201ENST00000229829 MT1GP13640 62 aa3.05□□□□□ -1.92
HLA-DOA-201ENST00000229829 LCE1EQ5T753 118 aa3.05□□□□□ -1.92
HLA-DOA-201ENST00000229829 KRTAP5-4Q6L8H1 288 aa3.04□□□□□ -1.92
HLA-DOA-201ENST00000229829 MT1MQ8N339 61 aa2.99□□□□□ -1.93
HLA-DOA-201ENST00000229829 KRTAP19-3Q7Z4W3 81 aa2.96□□□□□ -1.93
HLA-DOA-201ENST00000229829 KRTAP4-9Q9BYQ8 210 aa2.96□□□□□ -1.94
HLA-DOA-201ENST00000229829 MT3P25713 68 aa2.95□□□□□ -1.94
HLA-DOA-201ENST00000229829 LCE3BQ5TA77 95 aa2.94□□□□□ -1.94
HLA-DOA-201ENST00000229829 KRTAP20-1Q3LI63 56 aa2.94□□□□□ -1.94
HLA-DOA-201ENST00000229829 SYNE2Q8WXH0 6885 aaKnown RBP2.94□□□□□ -1.94
HLA-DOA-201ENST00000229829 MACF1Q9UPN3 7388 aaKnown RBP2.91□□□□□ -1.94
HLA-DOA-201ENST00000229829 LCE3EQ5T5B0 92 aa2.9□□□□□ -1.94
HLA-DOA-201ENST00000229829 KRTAP5-5Q701N2 237 aaPredicted RBP2.9□□□□□ -1.95
HLA-DOA-201ENST00000229829 LCE1DQ5T752 114 aa2.89□□□□□ -1.95
HLA-DOA-201ENST00000229829 SPRR2FQ96RM1 72 aa2.87□□□□□ -1.95
HLA-DOA-201ENST00000229829 MDN1Q9NU22 5596 aa2.85□□□□□ -1.95
HLA-DOA-201ENST00000229829 PRM1P04553 51 aa2.84□□□□□ -1.95
HLA-DOA-201ENST00000229829 KRTAP6-1Q3LI64 71 aa2.76□□□□□ -1.97
HLA-DOA-201ENST00000229829 LCE3DQ9BYE3 92 aa2.74□□□□□ -1.97
HLA-DOA-201ENST00000229829 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
HLA-DOA-201ENST00000229829 KRTAP5-7Q6L8G8 165 aa2.73□□□□□ -1.97
HLA-DOA-201ENST00000229829 KRTAP5-3Q6L8H2 238 aa2.67□□□□□ -1.98
HLA-DOA-201ENST00000229829 KRTAP5-10Q6L8G5 202 aa2.67□□□□□ -1.98
HLA-DOA-201ENST00000229829 MT1AP04731 61 aa2.66□□□□□ -1.98
HLA-DOA-201ENST00000229829 SPRR2EP22531 72 aa2.64□□□□□ -1.99
HLA-DOA-201ENST00000229829 SPRR2BP35325 72 aa2.64□□□□□ -1.99
HLA-DOA-201ENST00000229829 SPRR2AP35326 72 aa2.64□□□□□ -1.99
HLA-DOA-201ENST00000229829 SPRR2DP22532 72 aa2.61□□□□□ -1.99
HLA-DOA-201ENST00000229829 KRTAP6-2Q3LI66 62 aa2.58□□□□□ -2
HLA-DOA-201ENST00000229829 GPR98Q8WXG9 6306 aa2.54□□□□□ -2
HLA-DOA-201ENST00000229829 KRTAP5-8O75690 187 aa2.5□□□□□ -2.01
HLA-DOA-201ENST00000229829 MUC19Q7Z5P9 8384 aa2.47□□□□□ -2.01
HLA-DOA-201ENST00000229829 MUC5BQ9HC84 5762 aaPredicted RBP2.46□□□□□ -2.01
HLA-DOA-201ENST00000229829 KRTAP20-2Q3LI61 65 aa2.45□□□□□ -2.02
HLA-DOA-201ENST00000229829 AHNAK2Q8IVF2 5795 aa2.44□□□□□ -2.02
HLA-DOA-201ENST00000229829 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
HLA-DOA-201ENST00000229829 MT4P47944 62 aa2.34□□□□□ -2.03
HLA-DOA-201ENST00000229829 KRTAP5-1Q6L8H4 278 aa2.31□□□□□ -2.04
HLA-DOA-201ENST00000229829 HMCN1Q96RW7 5635 aa2.29□□□□□ -2.04
HLA-DOA-201ENST00000229829 AHNAKQ09666 5890 aaKnown RBP2.29□□□□□ -2.04
HLA-DOA-201ENST00000229829 KRTAP4-6Q9BYQ5 205 aa2.25□□□□□ -2.05
HLA-DOA-201ENST00000229829 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.2□□□□□ -2.06
HLA-DOA-201ENST00000229829 KRTAP4-11Q9BYQ6 195 aa2.18□□□□□ -2.06
HLA-DOA-201ENST00000229829 MUC5ACP98088 5654 aa2.13□□□□□ -2.07
HLA-DOA-201ENST00000229829 LCE1CQ5T751 118 aa2.08□□□□□ -2.08
HLA-DOA-201ENST00000229829 LCE1BQ5T7P3 118 aa2.08□□□□□ -2.08
HLA-DOA-201ENST00000229829 KRTAP5-11Q6L8G4 156 aa2.01□□□□□ -2.09
HLA-DOA-201ENST00000229829 KRTAP4-2Q9BYR5 136 aa1.97□□□□□ -2.09
HLA-DOA-201ENST00000229829 KRTAP4-4Q9BYR3 166 aa1.78□□□□□ -2.12
HLA-DOA-201ENST00000229829 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
HLA-DOA-201ENST00000229829 KRTAP21-1Q3LI58 79 aa1.6□□□□□ -2.15
HLA-DOA-201ENST00000229829 PHGR1C9JFL3 82 aa1.59□□□□□ -2.16
HLA-DOA-201ENST00000229829 MUC16Q8WXI7 14507 aa1.26□□□□□ -2.21
Retrieved 77 of 20,778 RNA–protein pairs in 47.4 ms