RNA–Protein interactions for RNA: ENST00000229340.9

RAB35-201, Transcript of RAB35, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB35, Length 2,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-201ENST00000229340 KRTAP9-2Q9BYQ4 174 aa5.49□□□□□ -1.53
RAB35-201ENST00000229340 MT1EP04732 61 aa5.49□□□□□ -1.53
RAB35-201ENST00000229340 KRTAP4-3Q9BYR4 195 aa5.47□□□□□ -1.53
RAB35-201ENST00000229340 FCGBPQ9Y6R7 5405 aaPredicted RBP5.46□□□□□ -1.54
RAB35-201ENST00000229340 CRCT1Q9UGL9 99 aa5.45□□□□□ -1.54
RAB35-201ENST00000229340 MT1GP13640 62 aa5.4□□□□□ -1.54
RAB35-201ENST00000229340 DSTQ03001 7570 aaKnown RBP5.33□□□□□ -1.56
RAB35-201ENST00000229340 MACF1Q9UPN3 7388 aaKnown RBP5.33□□□□□ -1.56
RAB35-201ENST00000229340 MUC12Q9UKN1 5478 aa5.31□□□□□ -1.56
RAB35-201ENST00000229340 SYNE2Q8WXH0 6885 aaKnown RBP5.3□□□□□ -1.56
RAB35-201ENST00000229340 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
RAB35-201ENST00000229340 KRTAP19-6Q3LI70 58 aa5.28□□□□□ -1.56
RAB35-201ENST00000229340 KRTAP4-9Q9BYQ8 210 aa5.23□□□□□ -1.57
RAB35-201ENST00000229340 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.58
RAB35-201ENST00000229340 LCE3BQ5TA77 95 aa5.16□□□□□ -1.58
RAB35-201ENST00000229340 MT1MQ8N339 61 aa5.11□□□□□ -1.59
RAB35-201ENST00000229340 KRTAP2-2Q9BYT5 123 aa5.11□□□□□ -1.59
RAB35-201ENST00000229340 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
RAB35-201ENST00000229340 KRTAP9-6A0A140TA67 174 aa5.01□□□□□ -1.61
RAB35-201ENST00000229340 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
RAB35-201ENST00000229340 KRTAP19-3Q7Z4W3 81 aa5.01□□□□□ -1.61
RAB35-201ENST00000229340 MDN1Q9NU22 5596 aa5.01□□□□□ -1.61
RAB35-201ENST00000229340 PRM1P04553 51 aa4.96□□□□□ -1.61
RAB35-201ENST00000229340 LCE1EQ5T753 118 aa4.96□□□□□ -1.61
RAB35-201ENST00000229340 SPRR2FQ96RM1 72 aa4.95□□□□□ -1.62
RAB35-201ENST00000229340 OBSCNQ5VST9 7968 aa4.89□□□□□ -1.63
RAB35-201ENST00000229340 LCE3DQ9BYE3 92 aa4.88□□□□□ -1.63
RAB35-201ENST00000229340 KRTAP5-5Q701N2 237 aaPredicted RBP4.88□□□□□ -1.63
RAB35-201ENST00000229340 KRTAP6-3Q3LI67 103 aa4.87□□□□□ -1.63
RAB35-201ENST00000229340 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.85□□□□□ -1.63
RAB35-201ENST00000229340 LCE3EQ5T5B0 92 aa4.84□□□□□ -1.63
RAB35-201ENST00000229340 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
RAB35-201ENST00000229340 MT1AP04731 61 aa4.81□□□□□ -1.64
RAB35-201ENST00000229340 LCE5AQ5TCM9 118 aa4.74□□□□□ -1.65
RAB35-201ENST00000229340 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
RAB35-201ENST00000229340 LCE1FQ5T754 118 aa4.69□□□□□ -1.66
RAB35-201ENST00000229340 SPRR2EP22531 72 aa4.65□□□□□ -1.66
RAB35-201ENST00000229340 SPRR2BP35325 72 aa4.65□□□□□ -1.66
RAB35-201ENST00000229340 SPRR2AP35326 72 aa4.65□□□□□ -1.66
RAB35-201ENST00000229340 KRTAP6-2Q3LI66 62 aa4.63□□□□□ -1.67
RAB35-201ENST00000229340 KRTAP5-9P26371 169 aa4.6□□□□□ -1.67
RAB35-201ENST00000229340 SPRR2DP22532 72 aa4.45□□□□□ -1.7
RAB35-201ENST00000229340 NEBP20929 6669 aa4.42□□□□□ -1.7
RAB35-201ENST00000229340 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
RAB35-201ENST00000229340 KRTAP4-6Q9BYQ5 205 aa4.3□□□□□ -1.72
RAB35-201ENST00000229340 MT3P25713 68 aa4.11□□□□□ -1.75
RAB35-201ENST00000229340 MT4P47944 62 aa4.05□□□□□ -1.76
RAB35-201ENST00000229340 KRTAP20-1Q3LI63 56 aa4.03□□□□□ -1.76
RAB35-201ENST00000229340 MUC19Q7Z5P9 8384 aa4.01□□□□□ -1.77
RAB35-201ENST00000229340 HMCN1Q96RW7 5635 aa3.9□□□□□ -1.78
RAB35-201ENST00000229340 KRTAP9-9Q9BYP9 154 aa3.83□□□□□ -1.8
RAB35-201ENST00000229340 KRTAP5-4Q6L8H1 288 aa3.8□□□□□ -1.8
RAB35-201ENST00000229340 KRTAP4-11Q9BYQ6 195 aa3.77□□□□□ -1.81
RAB35-201ENST00000229340 GPR98Q8WXG9 6306 aa3.75□□□□□ -1.81
RAB35-201ENST00000229340 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
RAB35-201ENST00000229340 LCE4AQ5TA78 99 aa3.71□□□□□ -1.82
RAB35-201ENST00000229340 KRTAP4-12Q9BQ66 201 aa3.7□□□□□ -1.82
RAB35-201ENST00000229340 KRTAP20-2Q3LI61 65 aa3.69□□□□□ -1.82
RAB35-201ENST00000229340 KRTAP5-3Q6L8H2 238 aa3.49□□□□□ -1.85
RAB35-201ENST00000229340 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
RAB35-201ENST00000229340 LCE1BQ5T7P3 118 aa3.46□□□□□ -1.86
RAB35-201ENST00000229340 KRTAP5-2Q701N4 177 aa3.42□□□□□ -1.86
RAB35-201ENST00000229340 KRTAP4-2Q9BYR5 136 aa3.35□□□□□ -1.87
RAB35-201ENST00000229340 AHNAK2Q8IVF2 5795 aa3.33□□□□□ -1.88
RAB35-201ENST00000229340 MUC5BQ9HC84 5762 aaPredicted RBP3.32□□□□□ -1.88
RAB35-201ENST00000229340 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
RAB35-201ENST00000229340 KRTAP5-7Q6L8G8 165 aa3.25□□□□□ -1.89
RAB35-201ENST00000229340 LCE1CQ5T751 118 aa3.23□□□□□ -1.89
RAB35-201ENST00000229340 AHNAKQ09666 5890 aaKnown RBP3.21□□□□□ -1.9
RAB35-201ENST00000229340 KRTAP5-8O75690 187 aa3.08□□□□□ -1.92
RAB35-201ENST00000229340 KRTAP21-1Q3LI58 79 aa3.05□□□□□ -1.92
RAB35-201ENST00000229340 KRTAP4-4Q9BYR3 166 aa3.03□□□□□ -1.92
RAB35-201ENST00000229340 KRTAP21-2Q3LI59 83 aa3.03□□□□□ -1.93
RAB35-201ENST00000229340 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.78□□□□□ -1.96
RAB35-201ENST00000229340 KRTAP5-11Q6L8G4 156 aa2.49□□□□□ -2.01
RAB35-201ENST00000229340 PHGR1C9JFL3 82 aa2.2□□□□□ -2.06
RAB35-201ENST00000229340 MUC16Q8WXI7 14507 aa1.61□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 161.1 ms