RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 SPRR2AP35326 72 aa4.04□□□□□ -1.76
CCND1-201ENST00000227507 KRTAP9-6A8MVA2 160 aa4.02□□□□□ -1.77
CCND1-201ENST00000227507 KRTAP9-6A0A140TA67 174 aa3.99□□□□□ -1.77
CCND1-201ENST00000227507 MT1GP13640 62 aa3.92□□□□□ -1.78
CCND1-201ENST00000227507 SPRR2DP22532 72 aa3.91□□□□□ -1.78
CCND1-201ENST00000227507 KRTAP19-3Q7Z4W3 81 aa3.85□□□□□ -1.79
CCND1-201ENST00000227507 MT1EP04732 61 aa3.84□□□□□ -1.79
CCND1-201ENST00000227507 KRTAP2-3P0C7H8 128 aa3.84□□□□□ -1.79
CCND1-201ENST00000227507 KRTAP2-4Q9BYR9 128 aa3.84□□□□□ -1.79
CCND1-201ENST00000227507 KRTAP2-1Q9BYU5 128 aa3.84□□□□□ -1.79
CCND1-201ENST00000227507 KRTAP12-4P60329 112 aa3.83□□□□□ -1.8
CCND1-201ENST00000227507 DSTQ03001 7570 aaKnown RBP3.81□□□□□ -1.8
CCND1-201ENST00000227507 MT1LQ93083 61 aa3.8□□□□□ -1.8
CCND1-201ENST00000227507 FCGBPQ9Y6R7 5405 aaPredicted RBP3.79□□□□□ -1.8
CCND1-201ENST00000227507 KRTAP19-7Q3SYF9 63 aa3.79□□□□□ -1.8
CCND1-201ENST00000227507 LOC100996750A0A140TA64 210 aa3.79□□□□□ -1.8
CCND1-201ENST00000227507 KRTAP4-3Q9BYR4 195 aa3.74□□□□□ -1.81
CCND1-201ENST00000227507 LCE3BQ5TA77 95 aa3.71□□□□□ -1.81
CCND1-201ENST00000227507 KRTAP9-7A8MTY7 169 aa3.71□□□□□ -1.82
CCND1-201ENST00000227507 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.7□□□□□ -1.82
CCND1-201ENST00000227507 MT1MQ8N339 61 aa3.68□□□□□ -1.82
CCND1-201ENST00000227507 KRTAP6-3Q3LI67 103 aa3.67□□□□□ -1.82
CCND1-201ENST00000227507 LCE1AQ5T7P2 110 aa3.62□□□□□ -1.83
CCND1-201ENST00000227507 MUC12Q9UKN1 5478 aa3.6□□□□□ -1.83
CCND1-201ENST00000227507 KRTAP4-9Q9BYQ8 210 aa3.59□□□□□ -1.84
CCND1-201ENST00000227507 KRTAP2-2Q9BYT5 123 aa3.58□□□□□ -1.84
CCND1-201ENST00000227507 LCE1EQ5T753 118 aa3.55□□□□□ -1.84
CCND1-201ENST00000227507 SSPOA2VEC9 5147 aa3.55□□□□□ -1.84
CCND1-201ENST00000227507 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
CCND1-201ENST00000227507 MUC19Q7Z5P9 8384 aa3.48□□□□□ -1.85
CCND1-201ENST00000227507 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
CCND1-201ENST00000227507 MACF1Q9UPN3 7388 aaKnown RBP3.47□□□□□ -1.85
CCND1-201ENST00000227507 LCE5AQ5TCM9 118 aa3.46□□□□□ -1.85
CCND1-201ENST00000227507 LCE3DQ9BYE3 92 aa3.44□□□□□ -1.86
CCND1-201ENST00000227507 PRM1P04553 51 aa3.43□□□□□ -1.86
CCND1-201ENST00000227507 MT4P47944 62 aa3.43□□□□□ -1.86
CCND1-201ENST00000227507 KRTAP5-9P26371 169 aa3.38□□□□□ -1.87
CCND1-201ENST00000227507 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
CCND1-201ENST00000227507 LCE1DQ5T752 114 aa3.35□□□□□ -1.87
CCND1-201ENST00000227507 MT1AP04731 61 aa3.34□□□□□ -1.87
CCND1-201ENST00000227507 MT3P25713 68 aa3.32□□□□□ -1.88
CCND1-201ENST00000227507 KRTAP6-1Q3LI64 71 aa3.26□□□□□ -1.89
CCND1-201ENST00000227507 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
CCND1-201ENST00000227507 LCE4AQ5TA78 99 aa3.24□□□□□ -1.89
CCND1-201ENST00000227507 NEBP20929 6669 aa3.17□□□□□ -1.9
CCND1-201ENST00000227507 MDN1Q9NU22 5596 aa3.15□□□□□ -1.9
CCND1-201ENST00000227507 KRTAP6-2Q3LI66 62 aa3.14□□□□□ -1.91
CCND1-201ENST00000227507 KRTAP5-5Q701N2 237 aaPredicted RBP3.13□□□□□ -1.91
CCND1-201ENST00000227507 KRTAP9-4Q9BYQ2 154 aa3.1□□□□□ -1.91
CCND1-201ENST00000227507 LCE1BQ5T7P3 118 aa3.07□□□□□ -1.92
CCND1-201ENST00000227507 KRTAP4-6Q9BYQ5 205 aa2.91□□□□□ -1.94
CCND1-201ENST00000227507 KRTAP20-2Q3LI61 65 aa2.86□□□□□ -1.95
CCND1-201ENST00000227507 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
CCND1-201ENST00000227507 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
CCND1-201ENST00000227507 KRTAP9-9Q9BYP9 154 aa2.62□□□□□ -1.99
CCND1-201ENST00000227507 KRTAP4-11Q9BYQ6 195 aa2.61□□□□□ -1.99
CCND1-201ENST00000227507 KRTAP4-12Q9BQ66 201 aa2.55□□□□□ -2
CCND1-201ENST00000227507 LCE1CQ5T751 118 aa2.51□□□□□ -2.01
CCND1-201ENST00000227507 KRTAP5-3Q6L8H2 238 aa2.51□□□□□ -2.01
CCND1-201ENST00000227507 HMCN1Q96RW7 5635 aa2.49□□□□□ -2.01
CCND1-201ENST00000227507 MUC5ACP98088 5654 aa2.43□□□□□ -2.02
CCND1-201ENST00000227507 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CCND1-201ENST00000227507 AHNAK2Q8IVF2 5795 aa2.31□□□□□ -2.04
CCND1-201ENST00000227507 KRTAP4-4Q9BYR3 166 aa2.28□□□□□ -2.04
CCND1-201ENST00000227507 KRTAP5-8O75690 187 aa2.27□□□□□ -2.05
CCND1-201ENST00000227507 KRTAP5-10Q6L8G5 202 aa2.25□□□□□ -2.05
CCND1-201ENST00000227507 KRTAP4-2Q9BYR5 136 aa2.23□□□□□ -2.05
CCND1-201ENST00000227507 KRTAP5-1Q6L8H4 278 aa2.1□□□□□ -2.07
CCND1-201ENST00000227507 KRTAP5-7Q6L8G8 165 aa2□□□□□ -2.09
CCND1-201ENST00000227507 KRTAP21-1Q3LI58 79 aa2□□□□□ -2.09
CCND1-201ENST00000227507 AHNAKQ09666 5890 aaKnown RBP1.97□□□□□ -2.09
CCND1-201ENST00000227507 KRTAP21-2Q3LI59 83 aa1.95□□□□□ -2.1
CCND1-201ENST00000227507 KRTAP5-11Q6L8G4 156 aa1.95□□□□□ -2.1
CCND1-201ENST00000227507 MUC5BQ9HC84 5762 aaPredicted RBP1.92□□□□□ -2.1
CCND1-201ENST00000227507 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.85□□□□□ -2.11
CCND1-201ENST00000227507 PHGR1C9JFL3 82 aa1.72□□□□□ -2.13
CCND1-201ENST00000227507 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 84.5 ms