RNA–Protein interactions for RNA: ENST00000227065.8

FAM149A-201, Transcript of family with sequence similarity 149 member A, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene FAM149A, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM149A-201ENST00000227065 KRTAP4-3Q9BYR4 195 aa8.89□□□□□ -0.99
FAM149A-201ENST00000227065 KRTAP19-6Q3LI70 58 aa8.81□□□□□ -1
FAM149A-201ENST00000227065 FCGBPQ9Y6R7 5405 aaPredicted RBP8.77□□□□□ -1.01
FAM149A-201ENST00000227065 MUC12Q9UKN1 5478 aa8.77□□□□□ -1.01
FAM149A-201ENST00000227065 MT1GP13640 62 aa8.75□□□□□ -1.01
FAM149A-201ENST00000227065 LCE2DQ5TA82 110 aaPredicted RBP8.7□□□□□ -1.02
FAM149A-201ENST00000227065 CRCT1Q9UGL9 99 aa8.69□□□□□ -1.02
FAM149A-201ENST00000227065 MT1MQ8N339 61 aa8.61□□□□□ -1.03
FAM149A-201ENST00000227065 KRTAP19-3Q7Z4W3 81 aa8.57□□□□□ -1.04
FAM149A-201ENST00000227065 DSTQ03001 7570 aaKnown RBP8.56□□□□□ -1.04
FAM149A-201ENST00000227065 KRTAP12-4P60329 112 aa8.46□□□□□ -1.06
FAM149A-201ENST00000227065 LCE5AQ5TCM9 118 aa8.23□□□□□ -1.09
FAM149A-201ENST00000227065 LCE3BQ5TA77 95 aa8.21□□□□□ -1.09
FAM149A-201ENST00000227065 SPRR2FQ96RM1 72 aa8.2□□□□□ -1.1
FAM149A-201ENST00000227065 KRTAP4-9Q9BYQ8 210 aa8.17□□□□□ -1.1
FAM149A-201ENST00000227065 SYNE1Q8NF91 8797 aaKnown RBP8.08□□□□□ -1.12
FAM149A-201ENST00000227065 MACF1Q9UPN3 7388 aaKnown RBP7.91□□□□□ -1.14
FAM149A-201ENST00000227065 KRTAP6-1Q3LI64 71 aa7.91□□□□□ -1.14
FAM149A-201ENST00000227065 MT1AP04731 61 aa7.83□□□□□ -1.16
FAM149A-201ENST00000227065 SYNE2Q8WXH0 6885 aaKnown RBP7.81□□□□□ -1.16
FAM149A-201ENST00000227065 KRTAP9-2Q9BYQ4 174 aa7.8□□□□□ -1.16
FAM149A-201ENST00000227065 MDN1Q9NU22 5596 aa7.75□□□□□ -1.17
FAM149A-201ENST00000227065 LCE3DQ9BYE3 92 aa7.72□□□□□ -1.17
FAM149A-201ENST00000227065 KRTAP9-7A8MTY7 169 aa7.66□□□□□ -1.18
FAM149A-201ENST00000227065 LCE3EQ5T5B0 92 aa7.63□□□□□ -1.19
FAM149A-201ENST00000227065 KRTAP5-5Q701N2 237 aaPredicted RBP7.59□□□□□ -1.19
FAM149A-201ENST00000227065 LCE1AQ5T7P2 110 aa7.57□□□□□ -1.2
FAM149A-201ENST00000227065 PRM1P04553 51 aa7.55□□□□□ -1.2
FAM149A-201ENST00000227065 OBSCNQ5VST9 7968 aa7.47□□□□□ -1.21
FAM149A-201ENST00000227065 KRTAP5-9P26371 169 aa7.39□□□□□ -1.23
FAM149A-201ENST00000227065 SPRR2EP22531 72 aa7.36□□□□□ -1.23
FAM149A-201ENST00000227065 SPRR2BP35325 72 aa7.36□□□□□ -1.23
FAM149A-201ENST00000227065 SPRR2AP35326 72 aa7.36□□□□□ -1.23
FAM149A-201ENST00000227065 KRTAP9-4Q9BYQ2 154 aa7.28□□□□□ -1.24
FAM149A-201ENST00000227065 KRTAP6-2Q3LI66 62 aa7.21□□□□□ -1.25
FAM149A-201ENST00000227065 SPRR2DP22532 72 aa7.01□□□□□ -1.29
FAM149A-201ENST00000227065 MT3P25713 68 aa6.94□□□□□ -1.3
FAM149A-201ENST00000227065 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.88□□□□□ -1.31
FAM149A-201ENST00000227065 KRTAP9-6A0A140TA67 174 aa6.84□□□□□ -1.31
FAM149A-201ENST00000227065 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
FAM149A-201ENST00000227065 KRTAP2-2Q9BYT5 123 aa6.62□□□□□ -1.35
FAM149A-201ENST00000227065 KRTAP5-4Q6L8H1 288 aa6.47□□□□□ -1.37
FAM149A-201ENST00000227065 NEBP20929 6669 aa6.39□□□□□ -1.39
FAM149A-201ENST00000227065 KRTAP4-6Q9BYQ5 205 aa6.36□□□□□ -1.39
FAM149A-201ENST00000227065 MT4P47944 62 aa6.27□□□□□ -1.41
FAM149A-201ENST00000227065 KRTAP20-2Q3LI61 65 aa6.13□□□□□ -1.43
FAM149A-201ENST00000227065 KRTAP5-2Q701N4 177 aa6.1□□□□□ -1.43
FAM149A-201ENST00000227065 MUC5ACP98088 5654 aa6.01□□□□□ -1.45
FAM149A-201ENST00000227065 LCE4AQ5TA78 99 aa5.96□□□□□ -1.46
FAM149A-201ENST00000227065 HMCN1Q96RW7 5635 aa5.9□□□□□ -1.47
FAM149A-201ENST00000227065 LCE1DQ5T752 114 aa5.87□□□□□ -1.47
FAM149A-201ENST00000227065 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
FAM149A-201ENST00000227065 KRTAP4-11Q9BYQ6 195 aa5.72□□□□□ -1.49
FAM149A-201ENST00000227065 LCE1BQ5T7P3 118 aa5.67□□□□□ -1.5
FAM149A-201ENST00000227065 KRTAP20-1Q3LI63 56 aa5.64□□□□□ -1.51
FAM149A-201ENST00000227065 LCE1EQ5T753 118 aa5.61□□□□□ -1.51
FAM149A-201ENST00000227065 KRTAP5-10Q6L8G5 202 aa5.6□□□□□ -1.51
FAM149A-201ENST00000227065 KRTAP5-1Q6L8H4 278 aa5.45□□□□□ -1.54
FAM149A-201ENST00000227065 KRTAP4-2Q9BYR5 136 aa5.34□□□□□ -1.55
FAM149A-201ENST00000227065 LCE1CQ5T751 118 aa5.27□□□□□ -1.57
FAM149A-201ENST00000227065 KRTAP21-2Q3LI59 83 aa5.07□□□□□ -1.6
FAM149A-201ENST00000227065 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.96□□□□□ -1.61
FAM149A-201ENST00000227065 MUC19Q7Z5P9 8384 aa4.83□□□□□ -1.64
FAM149A-201ENST00000227065 KRTAP4-4Q9BYR3 166 aa4.8□□□□□ -1.64
FAM149A-201ENST00000227065 AHNAK2Q8IVF2 5795 aa4.79□□□□□ -1.64
FAM149A-201ENST00000227065 KRTAP5-8O75690 187 aa4.76□□□□□ -1.65
FAM149A-201ENST00000227065 KRTAP21-1Q3LI58 79 aa4.68□□□□□ -1.66
FAM149A-201ENST00000227065 KRTAP5-7Q6L8G8 165 aa4.66□□□□□ -1.66
FAM149A-201ENST00000227065 KRTAP5-11Q6L8G4 156 aa4.49□□□□□ -1.69
FAM149A-201ENST00000227065 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
FAM149A-201ENST00000227065 KRTAP4-12Q9BQ66 201 aa4.37□□□□□ -1.71
FAM149A-201ENST00000227065 GPR98Q8WXG9 6306 aa4.2□□□□□ -1.74
FAM149A-201ENST00000227065 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
FAM149A-201ENST00000227065 PHGR1C9JFL3 82 aa3.91□□□□□ -1.78
FAM149A-201ENST00000227065 LCE1FQ5T754 118 aa3.86□□□□□ -1.79
FAM149A-201ENST00000227065 AHNAKQ09666 5890 aaKnown RBP3.41□□□□□ -1.86
FAM149A-201ENST00000227065 MUC16Q8WXI7 14507 aa2.63□□□□□ -1.99
Retrieved 77 of 20,778 RNA–protein pairs in 12.9 ms