RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 MT1GP13640 62 aa7.25□□□□□ -1.25
SMARCD2-201ENST00000225742 KRTAP19-3Q7Z4W3 81 aa7.24□□□□□ -1.25
SMARCD2-201ENST00000225742 MT1MQ8N339 61 aa7.2□□□□□ -1.26
SMARCD2-201ENST00000225742 KRTAP4-3Q9BYR4 195 aa7.1□□□□□ -1.27
SMARCD2-201ENST00000225742 FCGBPQ9Y6R7 5405 aaPredicted RBP7.04□□□□□ -1.28
SMARCD2-201ENST00000225742 LOC100996750A0A140TA64 210 aa7.03□□□□□ -1.28
SMARCD2-201ENST00000225742 LCE5AQ5TCM9 118 aa7.01□□□□□ -1.29
SMARCD2-201ENST00000225742 SPRR2FQ96RM1 72 aa6.95□□□□□ -1.3
SMARCD2-201ENST00000225742 FSIP2Q5CZC0 6907 aa6.93□□□□□ -1.3
SMARCD2-201ENST00000225742 MUC12Q9UKN1 5478 aa6.81□□□□□ -1.32
SMARCD2-201ENST00000225742 CRCT1Q9UGL9 99 aa6.79□□□□□ -1.32
SMARCD2-201ENST00000225742 KRTAP5-9P26371 169 aa6.63□□□□□ -1.35
SMARCD2-201ENST00000225742 KRTAP9-2Q9BYQ4 174 aa6.6□□□□□ -1.35
SMARCD2-201ENST00000225742 LCE1AQ5T7P2 110 aa6.55□□□□□ -1.36
SMARCD2-201ENST00000225742 MACF1Q9UPN3 7388 aaKnown RBP6.52□□□□□ -1.37
SMARCD2-201ENST00000225742 MT1AP04731 61 aa6.52□□□□□ -1.37
SMARCD2-201ENST00000225742 KRTAP12-4P60329 112 aa6.48□□□□□ -1.37
SMARCD2-201ENST00000225742 LCE3BQ5TA77 95 aa6.47□□□□□ -1.37
SMARCD2-201ENST00000225742 KRTAP6-1Q3LI64 71 aa6.45□□□□□ -1.38
SMARCD2-201ENST00000225742 KRTAP5-5Q701N2 237 aaPredicted RBP6.41□□□□□ -1.38
SMARCD2-201ENST00000225742 SPRR2EP22531 72 aa6.39□□□□□ -1.39
SMARCD2-201ENST00000225742 SPRR2BP35325 72 aa6.39□□□□□ -1.39
SMARCD2-201ENST00000225742 SPRR2AP35326 72 aa6.39□□□□□ -1.39
SMARCD2-201ENST00000225742 DSTQ03001 7570 aaKnown RBP6.3□□□□□ -1.4
SMARCD2-201ENST00000225742 KRTAP4-9Q9BYQ8 210 aa6.23□□□□□ -1.41
SMARCD2-201ENST00000225742 SYNE2Q8WXH0 6885 aaKnown RBP6.21□□□□□ -1.42
SMARCD2-201ENST00000225742 MDN1Q9NU22 5596 aa6.19□□□□□ -1.42
SMARCD2-201ENST00000225742 LCE3DQ9BYE3 92 aa6.18□□□□□ -1.42
SMARCD2-201ENST00000225742 SPRR2DP22532 72 aa6.14□□□□□ -1.43
SMARCD2-201ENST00000225742 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
SMARCD2-201ENST00000225742 KRTAP9-4Q9BYQ2 154 aa6.13□□□□□ -1.43
SMARCD2-201ENST00000225742 LCE3EQ5T5B0 92 aa6.11□□□□□ -1.43
SMARCD2-201ENST00000225742 SYNE1Q8NF91 8797 aaKnown RBP6.01□□□□□ -1.45
SMARCD2-201ENST00000225742 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.99□□□□□ -1.45
SMARCD2-201ENST00000225742 MT3P25713 68 aa5.87□□□□□ -1.47
SMARCD2-201ENST00000225742 KRTAP6-2Q3LI66 62 aa5.8□□□□□ -1.48
SMARCD2-201ENST00000225742 KRTAP9-6A0A140TA67 174 aa5.74□□□□□ -1.49
SMARCD2-201ENST00000225742 KRTAP5-4Q6L8H1 288 aa5.74□□□□□ -1.49
SMARCD2-201ENST00000225742 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
SMARCD2-201ENST00000225742 PRM1P04553 51 aa5.69□□□□□ -1.5
SMARCD2-201ENST00000225742 NEBP20929 6669 aa5.48□□□□□ -1.53
SMARCD2-201ENST00000225742 LCE4AQ5TA78 99 aa5.46□□□□□ -1.53
SMARCD2-201ENST00000225742 KRTAP4-6Q9BYQ5 205 aa5.36□□□□□ -1.55
SMARCD2-201ENST00000225742 KRTAP5-2Q701N4 177 aa5.34□□□□□ -1.55
SMARCD2-201ENST00000225742 KRTAP20-2Q3LI61 65 aa5.33□□□□□ -1.56
SMARCD2-201ENST00000225742 MT4P47944 62 aa5.3□□□□□ -1.56
SMARCD2-201ENST00000225742 OBSCNQ5VST9 7968 aa5.17□□□□□ -1.58
SMARCD2-201ENST00000225742 KRTAP2-2Q9BYT5 123 aa5.15□□□□□ -1.59
SMARCD2-201ENST00000225742 KRTAP20-1Q3LI63 56 aa5.13□□□□□ -1.59
SMARCD2-201ENST00000225742 KRTAP5-3Q6L8H2 238 aa5.1□□□□□ -1.59
SMARCD2-201ENST00000225742 LCE1DQ5T752 114 aa5.07□□□□□ -1.6
SMARCD2-201ENST00000225742 HMCN1Q96RW7 5635 aa4.94□□□□□ -1.62
SMARCD2-201ENST00000225742 LCE1EQ5T753 118 aa4.89□□□□□ -1.63
SMARCD2-201ENST00000225742 MUC5ACP98088 5654 aa4.72□□□□□ -1.65
SMARCD2-201ENST00000225742 LCE1BQ5T7P3 118 aa4.61□□□□□ -1.67
SMARCD2-201ENST00000225742 KRTAP5-10Q6L8G5 202 aa4.6□□□□□ -1.67
SMARCD2-201ENST00000225742 LCE1CQ5T751 118 aa4.57□□□□□ -1.68
SMARCD2-201ENST00000225742 KRTAP5-1Q6L8H4 278 aa4.55□□□□□ -1.68
SMARCD2-201ENST00000225742 KRTAP4-2Q9BYR5 136 aa4.53□□□□□ -1.68
SMARCD2-201ENST00000225742 KRTAP4-11Q9BYQ6 195 aa4.42□□□□□ -1.7
SMARCD2-201ENST00000225742 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.35□□□□□ -1.71
SMARCD2-201ENST00000225742 KRTAP5-8O75690 187 aa4.28□□□□□ -1.72
SMARCD2-201ENST00000225742 KRTAP5-7Q6L8G8 165 aa4.28□□□□□ -1.72
SMARCD2-201ENST00000225742 KRTAP21-2Q3LI59 83 aa4.21□□□□□ -1.74
SMARCD2-201ENST00000225742 AHNAK2Q8IVF2 5795 aa4.04□□□□□ -1.76
SMARCD2-201ENST00000225742 KRTAP5-11Q6L8G4 156 aa3.95□□□□□ -1.78
SMARCD2-201ENST00000225742 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
SMARCD2-201ENST00000225742 KRTAP21-1Q3LI58 79 aa3.64□□□□□ -1.83
SMARCD2-201ENST00000225742 KRTAP9-9Q9BYP9 154 aa3.64□□□□□ -1.83
SMARCD2-201ENST00000225742 MUC5BQ9HC84 5762 aaPredicted RBP3.57□□□□□ -1.84
SMARCD2-201ENST00000225742 KRTAP4-12Q9BQ66 201 aa3.54□□□□□ -1.84
SMARCD2-201ENST00000225742 PHGR1C9JFL3 82 aa3.38□□□□□ -1.87
SMARCD2-201ENST00000225742 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SMARCD2-201ENST00000225742 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
SMARCD2-201ENST00000225742 MUC19Q7Z5P9 8384 aa3.15□□□□□ -1.9
SMARCD2-201ENST00000225742 AHNAKQ09666 5890 aaKnown RBP2.8□□□□□ -1.96
SMARCD2-201ENST00000225742 MUC16Q8WXI7 14507 aa2.29□□□□□ -2.04
Retrieved 77 of 20,778 RNA–protein pairs in 5.2 ms