RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
TGFB1-201ENST00000221930 DSTQ03001 7570 aaKnown RBP5.36□□□□□ -1.55
TGFB1-201ENST00000221930 MT1EP04732 61 aa5.27□□□□□ -1.57
TGFB1-201ENST00000221930 MT1LQ93083 61 aa5.27□□□□□ -1.57
TGFB1-201ENST00000221930 KRTAP2-3P0C7H8 128 aa5.23□□□□□ -1.57
TGFB1-201ENST00000221930 KRTAP2-4Q9BYR9 128 aa5.23□□□□□ -1.57
TGFB1-201ENST00000221930 KRTAP2-1Q9BYU5 128 aa5.23□□□□□ -1.57
TGFB1-201ENST00000221930 MACF1Q9UPN3 7388 aaKnown RBP5.15□□□□□ -1.59
TGFB1-201ENST00000221930 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.13□□□□□ -1.59
TGFB1-201ENST00000221930 SYNE2Q8WXH0 6885 aaKnown RBP5.12□□□□□ -1.59
TGFB1-201ENST00000221930 KRTAP4-3Q9BYR4 195 aa5.08□□□□□ -1.6
TGFB1-201ENST00000221930 LOC100996750A0A140TA64 210 aa5.05□□□□□ -1.6
TGFB1-201ENST00000221930 KRTAP9-7A8MTY7 169 aa5.02□□□□□ -1.61
TGFB1-201ENST00000221930 MT1GP13640 62 aa4.99□□□□□ -1.61
TGFB1-201ENST00000221930 KRTAP19-3Q7Z4W3 81 aa4.98□□□□□ -1.61
TGFB1-201ENST00000221930 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
TGFB1-201ENST00000221930 SYNE1Q8NF91 8797 aaKnown RBP4.94□□□□□ -1.62
TGFB1-201ENST00000221930 MT1MQ8N339 61 aa4.93□□□□□ -1.62
TGFB1-201ENST00000221930 KRTAP6-3Q3LI67 103 aa4.88□□□□□ -1.63
TGFB1-201ENST00000221930 SPRR2FQ96RM1 72 aa4.87□□□□□ -1.63
TGFB1-201ENST00000221930 LCE5AQ5TCM9 118 aa4.87□□□□□ -1.63
TGFB1-201ENST00000221930 OBSCNQ5VST9 7968 aa4.85□□□□□ -1.63
TGFB1-201ENST00000221930 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
TGFB1-201ENST00000221930 KRTAP12-4P60329 112 aa4.78□□□□□ -1.64
TGFB1-201ENST00000221930 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
TGFB1-201ENST00000221930 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
TGFB1-201ENST00000221930 KRTAP2-2Q9BYT5 123 aa4.6□□□□□ -1.67
TGFB1-201ENST00000221930 NEBP20929 6669 aa4.59□□□□□ -1.67
TGFB1-201ENST00000221930 KRTAP4-6Q9BYQ5 205 aa4.56□□□□□ -1.68
TGFB1-201ENST00000221930 KRTAP4-9Q9BYQ8 210 aa4.55□□□□□ -1.68
TGFB1-201ENST00000221930 SPRR2EP22531 72 aa4.53□□□□□ -1.68
TGFB1-201ENST00000221930 SPRR2BP35325 72 aa4.53□□□□□ -1.68
TGFB1-201ENST00000221930 SPRR2AP35326 72 aa4.53□□□□□ -1.68
TGFB1-201ENST00000221930 KRTAP6-1Q3LI64 71 aa4.51□□□□□ -1.69
TGFB1-201ENST00000221930 KRTAP5-5Q701N2 237 aaPredicted RBP4.44□□□□□ -1.7
TGFB1-201ENST00000221930 MT1AP04731 61 aa4.43□□□□□ -1.7
TGFB1-201ENST00000221930 KRTAP20-1Q3LI63 56 aa4.42□□□□□ -1.7
TGFB1-201ENST00000221930 SPRR2DP22532 72 aa4.37□□□□□ -1.71
TGFB1-201ENST00000221930 PRM1P04553 51 aa4.32□□□□□ -1.72
TGFB1-201ENST00000221930 LCE3DQ9BYE3 92 aa4.31□□□□□ -1.72
TGFB1-201ENST00000221930 LCE3EQ5T5B0 92 aa4.23□□□□□ -1.73
TGFB1-201ENST00000221930 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
TGFB1-201ENST00000221930 KRTAP9-4Q9BYQ2 154 aa4.17□□□□□ -1.74
TGFB1-201ENST00000221930 LCE4AQ5TA78 99 aa4.16□□□□□ -1.74
TGFB1-201ENST00000221930 KRTAP5-4Q6L8H1 288 aa4.13□□□□□ -1.75
TGFB1-201ENST00000221930 LCE1EQ5T753 118 aa4.12□□□□□ -1.75
TGFB1-201ENST00000221930 KRTAP9-9Q9BYP9 154 aa4.06□□□□□ -1.76
TGFB1-201ENST00000221930 KRTAP6-2Q3LI66 62 aa4.05□□□□□ -1.76
TGFB1-201ENST00000221930 MT3P25713 68 aa4□□□□□ -1.77
TGFB1-201ENST00000221930 LCE1DQ5T752 114 aa3.97□□□□□ -1.77
TGFB1-201ENST00000221930 MT4P47944 62 aa3.91□□□□□ -1.78
TGFB1-201ENST00000221930 KRTAP5-2Q701N4 177 aa3.81□□□□□ -1.8
TGFB1-201ENST00000221930 HMCN1Q96RW7 5635 aa3.79□□□□□ -1.8
TGFB1-201ENST00000221930 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
TGFB1-201ENST00000221930 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
TGFB1-201ENST00000221930 KRTAP4-11Q9BYQ6 195 aa3.62□□□□□ -1.83
TGFB1-201ENST00000221930 KRTAP4-2Q9BYR5 136 aa3.6□□□□□ -1.83
TGFB1-201ENST00000221930 LCE1FQ5T754 118 aa3.59□□□□□ -1.83
TGFB1-201ENST00000221930 GPR98Q8WXG9 6306 aa3.58□□□□□ -1.84
TGFB1-201ENST00000221930 KRTAP5-10Q6L8G5 202 aa3.53□□□□□ -1.84
TGFB1-201ENST00000221930 AHNAK2Q8IVF2 5795 aa3.51□□□□□ -1.85
TGFB1-201ENST00000221930 MUC5ACP98088 5654 aa3.45□□□□□ -1.86
TGFB1-201ENST00000221930 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
TGFB1-201ENST00000221930 LCE1BQ5T7P3 118 aa3.31□□□□□ -1.88
TGFB1-201ENST00000221930 LCE1CQ5T751 118 aa3.22□□□□□ -1.89
TGFB1-201ENST00000221930 KRTAP5-1Q6L8H4 278 aa3.19□□□□□ -1.9
TGFB1-201ENST00000221930 KRTAP5-8O75690 187 aa3.16□□□□□ -1.9
TGFB1-201ENST00000221930 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.09□□□□□ -1.91
TGFB1-201ENST00000221930 MUC19Q7Z5P9 8384 aa3.03□□□□□ -1.92
TGFB1-201ENST00000221930 MUC5BQ9HC84 5762 aaPredicted RBP2.98□□□□□ -1.93
TGFB1-201ENST00000221930 KRTAP21-2Q3LI59 83 aa2.89□□□□□ -1.95
TGFB1-201ENST00000221930 AHNAKQ09666 5890 aaKnown RBP2.89□□□□□ -1.95
TGFB1-201ENST00000221930 KRTAP21-1Q3LI58 79 aa2.86□□□□□ -1.95
TGFB1-201ENST00000221930 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
TGFB1-201ENST00000221930 KRTAP5-11Q6L8G4 156 aa2.82□□□□□ -1.96
TGFB1-201ENST00000221930 PHGR1C9JFL3 82 aa2.39□□□□□ -2.03
TGFB1-201ENST00000221930 MUC16Q8WXI7 14507 aa1.62□□□□□ -2.15
Retrieved 77 of 20,778 RNA–protein pairs in 5.5 ms