RNA–Protein interactions for RNA: ENST00000217381.2

SNTA1-201, Transcript of syntrophin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNTA1, Length 2,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNTA1-201ENST00000217381 CRCT1Q9UGL9 99 aa8.33□□□□□ -1.08
SNTA1-201ENST00000217381 KRTAP2-3P0C7H8 128 aa8.26□□□□□ -1.09
SNTA1-201ENST00000217381 KRTAP2-4Q9BYR9 128 aa8.26□□□□□ -1.09
SNTA1-201ENST00000217381 KRTAP2-1Q9BYU5 128 aa8.26□□□□□ -1.09
SNTA1-201ENST00000217381 MACF1Q9UPN3 7388 aaKnown RBP8.19□□□□□ -1.1
SNTA1-201ENST00000217381 SYNE2Q8WXH0 6885 aaKnown RBP8.05□□□□□ -1.12
SNTA1-201ENST00000217381 KRTAP9-6A0A140TA67 174 aa8.02□□□□□ -1.13
SNTA1-201ENST00000217381 KRTAP4-3Q9BYR4 195 aa7.92□□□□□ -1.14
SNTA1-201ENST00000217381 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.14
SNTA1-201ENST00000217381 LOC100996750A0A140TA64 210 aa7.87□□□□□ -1.15
SNTA1-201ENST00000217381 KRTAP19-3Q7Z4W3 81 aa7.85□□□□□ -1.15
SNTA1-201ENST00000217381 MT1MQ8N339 61 aa7.85□□□□□ -1.15
SNTA1-201ENST00000217381 MT1GP13640 62 aa7.81□□□□□ -1.16
SNTA1-201ENST00000217381 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.73□□□□□ -1.17
SNTA1-201ENST00000217381 SPRR2FQ96RM1 72 aa7.7□□□□□ -1.18
SNTA1-201ENST00000217381 LCE5AQ5TCM9 118 aa7.62□□□□□ -1.19
SNTA1-201ENST00000217381 MDN1Q9NU22 5596 aa7.62□□□□□ -1.19
SNTA1-201ENST00000217381 KRTAP5-9P26371 169 aa7.51□□□□□ -1.21
SNTA1-201ENST00000217381 KRTAP6-3Q3LI67 103 aa7.42□□□□□ -1.22
SNTA1-201ENST00000217381 DSTQ03001 7570 aaKnown RBP7.37□□□□□ -1.23
SNTA1-201ENST00000217381 KRTAP9-7A8MTY7 169 aa7.34□□□□□ -1.23
SNTA1-201ENST00000217381 LCE1AQ5T7P2 110 aa7.33□□□□□ -1.24
SNTA1-201ENST00000217381 SPRR2EP22531 72 aa7.29□□□□□ -1.24
SNTA1-201ENST00000217381 SPRR2BP35325 72 aa7.29□□□□□ -1.24
SNTA1-201ENST00000217381 SPRR2AP35326 72 aa7.29□□□□□ -1.24
SNTA1-201ENST00000217381 KRTAP12-4P60329 112 aa7.26□□□□□ -1.25
SNTA1-201ENST00000217381 LCE3BQ5TA77 95 aa7.21□□□□□ -1.26
SNTA1-201ENST00000217381 KRTAP6-1Q3LI64 71 aa7.11□□□□□ -1.27
SNTA1-201ENST00000217381 NEBP20929 6669 aa7.09□□□□□ -1.27
SNTA1-201ENST00000217381 KRTAP4-9Q9BYQ8 210 aa7.05□□□□□ -1.28
SNTA1-201ENST00000217381 MT1AP04731 61 aa7.05□□□□□ -1.28
SNTA1-201ENST00000217381 SPRR2DP22532 72 aa7□□□□□ -1.29
SNTA1-201ENST00000217381 KRTAP5-5Q701N2 237 aaPredicted RBP7□□□□□ -1.29
SNTA1-201ENST00000217381 SYNE1Q8NF91 8797 aaKnown RBP6.9□□□□□ -1.3
SNTA1-201ENST00000217381 LCE3DQ9BYE3 92 aa6.81□□□□□ -1.32
SNTA1-201ENST00000217381 LCE3EQ5T5B0 92 aa6.72□□□□□ -1.33
SNTA1-201ENST00000217381 KRTAP9-4Q9BYQ2 154 aa6.62□□□□□ -1.35
SNTA1-201ENST00000217381 KRTAP20-1Q3LI63 56 aa6.44□□□□□ -1.38
SNTA1-201ENST00000217381 PRM1P04553 51 aa6.43□□□□□ -1.38
SNTA1-201ENST00000217381 KRTAP6-2Q3LI66 62 aa6.37□□□□□ -1.39
SNTA1-201ENST00000217381 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
SNTA1-201ENST00000217381 MT3P25713 68 aa6.32□□□□□ -1.4
SNTA1-201ENST00000217381 KRTAP5-4Q6L8H1 288 aa6.25□□□□□ -1.41
SNTA1-201ENST00000217381 MT4P47944 62 aa6.21□□□□□ -1.42
SNTA1-201ENST00000217381 KRTAP4-6Q9BYQ5 205 aa6.15□□□□□ -1.42
SNTA1-201ENST00000217381 HMCN1Q96RW7 5635 aa6.07□□□□□ -1.44
SNTA1-201ENST00000217381 LCE4AQ5TA78 99 aa6.07□□□□□ -1.44
SNTA1-201ENST00000217381 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
SNTA1-201ENST00000217381 OBSCNQ5VST9 7968 aa6.02□□□□□ -1.45
SNTA1-201ENST00000217381 KRTAP20-2Q3LI61 65 aa5.91□□□□□ -1.46
SNTA1-201ENST00000217381 KRTAP5-2Q701N4 177 aa5.79□□□□□ -1.48
SNTA1-201ENST00000217381 KRTAP5-3Q6L8H2 238 aa5.68□□□□□ -1.5
SNTA1-201ENST00000217381 AHNAK2Q8IVF2 5795 aa5.38□□□□□ -1.55
SNTA1-201ENST00000217381 MUC5ACP98088 5654 aa5.34□□□□□ -1.55
SNTA1-201ENST00000217381 LCE1EQ5T753 118 aa5.19□□□□□ -1.58
SNTA1-201ENST00000217381 KRTAP4-11Q9BYQ6 195 aa5.14□□□□□ -1.59
SNTA1-201ENST00000217381 LCE1BQ5T7P3 118 aa5.06□□□□□ -1.6
SNTA1-201ENST00000217381 KRTAP5-10Q6L8G5 202 aa5.06□□□□□ -1.6
SNTA1-201ENST00000217381 KRTAP5-1Q6L8H4 278 aa4.97□□□□□ -1.61
SNTA1-201ENST00000217381 KRTAP4-2Q9BYR5 136 aa4.97□□□□□ -1.61
SNTA1-201ENST00000217381 KRTAP5-8O75690 187 aa4.96□□□□□ -1.61
SNTA1-201ENST00000217381 GPR98Q8WXG9 6306 aa4.95□□□□□ -1.62
SNTA1-201ENST00000217381 LCE1CQ5T751 118 aa4.91□□□□□ -1.62
SNTA1-201ENST00000217381 KRTAP5-7Q6L8G8 165 aa4.68□□□□□ -1.66
SNTA1-201ENST00000217381 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.66□□□□□ -1.66
SNTA1-201ENST00000217381 KRTAP21-2Q3LI59 83 aa4.61□□□□□ -1.67
SNTA1-201ENST00000217381 MUC5BQ9HC84 5762 aaPredicted RBP4.48□□□□□ -1.69
SNTA1-201ENST00000217381 KRTAP9-9Q9BYP9 154 aa4.41□□□□□ -1.7
SNTA1-201ENST00000217381 KRTAP5-11Q6L8G4 156 aa4.24□□□□□ -1.73
SNTA1-201ENST00000217381 KRTAP4-4Q9BYR3 166 aa4.16□□□□□ -1.74
SNTA1-201ENST00000217381 KRTAP4-12Q9BQ66 201 aa4.13□□□□□ -1.75
SNTA1-201ENST00000217381 KRTAP21-1Q3LI58 79 aa4.06□□□□□ -1.76
SNTA1-201ENST00000217381 AHNAKQ09666 5890 aaKnown RBP4.05□□□□□ -1.76
SNTA1-201ENST00000217381 MUC19Q7Z5P9 8384 aa3.84□□□□□ -1.79
SNTA1-201ENST00000217381 PHGR1C9JFL3 82 aa3.67□□□□□ -1.82
SNTA1-201ENST00000217381 LCE1FQ5T754 118 aa3.63□□□□□ -1.83
SNTA1-201ENST00000217381 MUC16Q8WXI7 14507 aa2.44□□□□□ -2.02
Retrieved 77 of 20,778 RNA–protein pairs in 12.4 ms