RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 A0A0A0MQY5 61 aa10.06□□□□□ -0.8
PABPN1-201ENST00000216727 MACF1Q9UPN3 7388 aaKnown RBP10.05□□□□□ -0.8
PABPN1-201ENST00000216727 MT1GP13640 62 aa10.04□□□□□ -0.8
PABPN1-201ENST00000216727 MUC12Q9UKN1 5478 aa10.02□□□□□ -0.81
PABPN1-201ENST00000216727 SPRR2FQ96RM1 72 aa10□□□□□ -0.81
PABPN1-201ENST00000216727 MT1MQ8N339 61 aa9.95□□□□□ -0.82
PABPN1-201ENST00000216727 LCE5AQ5TCM9 118 aa9.85□□□□□ -0.83
PABPN1-201ENST00000216727 KRTAP4-3Q9BYR4 195 aa9.81□□□□□ -0.84
PABPN1-201ENST00000216727 KRTAP5-9P26371 169 aa9.73□□□□□ -0.85
PABPN1-201ENST00000216727 SYNE2Q8WXH0 6885 aaKnown RBP9.71□□□□□ -0.85
PABPN1-201ENST00000216727 KRTAP2-3P0C7H8 128 aa9.63□□□□□ -0.87
PABPN1-201ENST00000216727 KRTAP2-4Q9BYR9 128 aa9.63□□□□□ -0.87
PABPN1-201ENST00000216727 KRTAP2-1Q9BYU5 128 aa9.63□□□□□ -0.87
PABPN1-201ENST00000216727 LOC100996750A0A140TA64 210 aa9.6□□□□□ -0.87
PABPN1-201ENST00000216727 LCE1AQ5T7P2 110 aa9.5□□□□□ -0.89
PABPN1-201ENST00000216727 MDN1Q9NU22 5596 aa9.44□□□□□ -0.9
PABPN1-201ENST00000216727 INE1O15225 51 aa9.34□□□□□ -0.91
PABPN1-201ENST00000216727 SPRR2EP22531 72 aa9.32□□□□□ -0.92
PABPN1-201ENST00000216727 SPRR2BP35325 72 aa9.32□□□□□ -0.92
PABPN1-201ENST00000216727 SPRR2AP35326 72 aa9.32□□□□□ -0.92
PABPN1-201ENST00000216727 DSTQ03001 7570 aaKnown RBP9.32□□□□□ -0.92
PABPN1-201ENST00000216727 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.3□□□□□ -0.92
PABPN1-201ENST00000216727 KRTAP9-6A0A140TA67 174 aa9.27□□□□□ -0.93
PABPN1-201ENST00000216727 KRTAP6-3Q3LI67 103 aa9.26□□□□□ -0.93
PABPN1-201ENST00000216727 SPRR2DP22532 72 aa8.96□□□□□ -0.98
PABPN1-201ENST00000216727 KRTAP5-5Q701N2 237 aaPredicted RBP8.94□□□□□ -0.98
PABPN1-201ENST00000216727 MT1AP04731 61 aa8.88□□□□□ -0.99
PABPN1-201ENST00000216727 KRTAP6-1Q3LI64 71 aa8.83□□□□□ -1
PABPN1-201ENST00000216727 LCE3BQ5TA77 95 aa8.7□□□□□ -1.02
PABPN1-201ENST00000216727 NEBP20929 6669 aa8.6□□□□□ -1.03
PABPN1-201ENST00000216727 KRTAP9-7A8MTY7 169 aa8.58□□□□□ -1.04
PABPN1-201ENST00000216727 SYNE1Q8NF91 8797 aaKnown RBP8.47□□□□□ -1.05
PABPN1-201ENST00000216727 KRTAP9-4Q9BYQ2 154 aa8.41□□□□□ -1.06
PABPN1-201ENST00000216727 KRTAP4-9Q9BYQ8 210 aa8.32□□□□□ -1.08
PABPN1-201ENST00000216727 KRTAP12-4P60329 112 aa8.27□□□□□ -1.09
PABPN1-201ENST00000216727 KRTAP5-4Q6L8H1 288 aa8.26□□□□□ -1.09
PABPN1-201ENST00000216727 LCE3DQ9BYE3 92 aa8.11□□□□□ -1.11
PABPN1-201ENST00000216727 KRTAP6-2Q3LI66 62 aa8.04□□□□□ -1.12
PABPN1-201ENST00000216727 MT3P25713 68 aa8.03□□□□□ -1.12
PABPN1-201ENST00000216727 LCE3EQ5T5B0 92 aa7.95□□□□□ -1.14
PABPN1-201ENST00000216727 LCE4AQ5TA78 99 aa7.95□□□□□ -1.14
PABPN1-201ENST00000216727 KRTAP2-2Q9BYT5 123 aa7.85□□□□□ -1.15
PABPN1-201ENST00000216727 KRTAP4-6Q9BYQ5 205 aa7.81□□□□□ -1.16
PABPN1-201ENST00000216727 MT4P47944 62 aa7.78□□□□□ -1.16
PABPN1-201ENST00000216727 KRTAP20-2Q3LI61 65 aa7.69□□□□□ -1.18
PABPN1-201ENST00000216727 KRTAP20-1Q3LI63 56 aa7.64□□□□□ -1.19
PABPN1-201ENST00000216727 KRTAP5-2Q701N4 177 aa7.59□□□□□ -1.19
PABPN1-201ENST00000216727 LCE1DQ5T752 114 aa7.56□□□□□ -1.2
PABPN1-201ENST00000216727 HMCN1Q96RW7 5635 aa7.54□□□□□ -1.2
PABPN1-201ENST00000216727 KRTAP5-3Q6L8H2 238 aa7.4□□□□□ -1.23
PABPN1-201ENST00000216727 OBSCNQ5VST9 7968 aa7.38□□□□□ -1.23
PABPN1-201ENST00000216727 PRM1P04553 51 aa7.19□□□□□ -1.26
PABPN1-201ENST00000216727 LCE1EQ5T753 118 aa6.84□□□□□ -1.31
PABPN1-201ENST00000216727 MUC5ACP98088 5654 aa6.55□□□□□ -1.36
PABPN1-201ENST00000216727 KRTAP4-11Q9BYQ6 195 aa6.54□□□□□ -1.36
PABPN1-201ENST00000216727 KRTAP5-1Q6L8H4 278 aa6.49□□□□□ -1.37
PABPN1-201ENST00000216727 KRTAP5-10Q6L8G5 202 aa6.47□□□□□ -1.37
PABPN1-201ENST00000216727 LCE1BQ5T7P3 118 aa6.43□□□□□ -1.38
PABPN1-201ENST00000216727 LCE1CQ5T751 118 aa6.4□□□□□ -1.39
PABPN1-201ENST00000216727 KRTAP4-2Q9BYR5 136 aa6.38□□□□□ -1.39
PABPN1-201ENST00000216727 AHNAK2Q8IVF2 5795 aa6.36□□□□□ -1.39
PABPN1-201ENST00000216727 KRTAP5-8O75690 187 aa6.28□□□□□ -1.4
PABPN1-201ENST00000216727 KRTAP5-7Q6L8G8 165 aa6.2□□□□□ -1.42
PABPN1-201ENST00000216727 KRTAP5-6Q6L8G9 129 aaPredicted RBP6.04□□□□□ -1.44
PABPN1-201ENST00000216727 GPR98Q8WXG9 6306 aa5.82□□□□□ -1.48
PABPN1-201ENST00000216727 KRTAP21-2Q3LI59 83 aa5.78□□□□□ -1.48
PABPN1-201ENST00000216727 KRTAP5-11Q6L8G4 156 aa5.58□□□□□ -1.52
PABPN1-201ENST00000216727 KRTAP9-9Q9BYP9 154 aa5.5□□□□□ -1.53
PABPN1-201ENST00000216727 MUC5BQ9HC84 5762 aaPredicted RBP5.38□□□□□ -1.55
PABPN1-201ENST00000216727 KRTAP4-12Q9BQ66 201 aa5.14□□□□□ -1.59
PABPN1-201ENST00000216727 KRTAP4-4Q9BYR3 166 aa5.09□□□□□ -1.59
PABPN1-201ENST00000216727 LCE1FQ5T754 118 aa4.87□□□□□ -1.63
PABPN1-201ENST00000216727 PHGR1C9JFL3 82 aa4.79□□□□□ -1.64
PABPN1-201ENST00000216727 AHNAKQ09666 5890 aaKnown RBP4.57□□□□□ -1.68
PABPN1-201ENST00000216727 KRTAP21-1Q3LI58 79 aa4.5□□□□□ -1.69
PABPN1-201ENST00000216727 MUC19Q7Z5P9 8384 aa4.39□□□□□ -1.71
PABPN1-201ENST00000216727 MUC16Q8WXI7 14507 aa3.09□□□□□ -1.91
Retrieved 77 of 20,778 RNA–protein pairs in 10 ms