RNA–Protein interactions for RNA: ENST00000216420.11

CGRRF1-201, Transcript of cell growth regulator with ring finger domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CGRRF1, Length 2,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGRRF1-201ENST00000216420 MT1GP13640 62 aa5.69□□□□□ -1.5
CGRRF1-201ENST00000216420 USH2AO75445 5202 aa5.68□□□□□ -1.5
CGRRF1-201ENST00000216420 KRTAP4-3Q9BYR4 195 aa5.65□□□□□ -1.51
CGRRF1-201ENST00000216420 MT1MQ8N339 61 aa5.6□□□□□ -1.51
CGRRF1-201ENST00000216420 LCE2AQ5TA79 106 aaPredicted RBP5.59□□□□□ -1.51
CGRRF1-201ENST00000216420 KRTAP4-6Q9BYQ5 205 aa5.59□□□□□ -1.52
CGRRF1-201ENST00000216420 MT1AP04731 61 aa5.56□□□□□ -1.52
CGRRF1-201ENST00000216420 KRTAP19-3Q7Z4W3 81 aa5.51□□□□□ -1.53
CGRRF1-201ENST00000216420 CRCT1Q9UGL9 99 aa5.44□□□□□ -1.54
CGRRF1-201ENST00000216420 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
CGRRF1-201ENST00000216420 LCE3BQ5TA77 95 aa5.39□□□□□ -1.55
CGRRF1-201ENST00000216420 KRTAP19-6Q3LI70 58 aa5.38□□□□□ -1.55
CGRRF1-201ENST00000216420 KRTAP5-5Q701N2 237 aaPredicted RBP5.38□□□□□ -1.55
CGRRF1-201ENST00000216420 KRTAP4-9Q9BYQ8 210 aa5.36□□□□□ -1.55
CGRRF1-201ENST00000216420 LCE3EQ5T5B0 92 aa5.35□□□□□ -1.55
CGRRF1-201ENST00000216420 PRM1P04553 51 aa5.34□□□□□ -1.55
CGRRF1-201ENST00000216420 LCE3DQ9BYE3 92 aa5.34□□□□□ -1.55
CGRRF1-201ENST00000216420 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
CGRRF1-201ENST00000216420 LCE5AQ5TCM9 118 aa5.26□□□□□ -1.57
CGRRF1-201ENST00000216420 KRTAP6-1Q3LI64 71 aa5.18□□□□□ -1.58
CGRRF1-201ENST00000216420 FSIP2Q5CZC0 6907 aa5.15□□□□□ -1.59
CGRRF1-201ENST00000216420 KRTAP6-3Q3LI67 103 aa5.14□□□□□ -1.59
CGRRF1-201ENST00000216420 FCGBPQ9Y6R7 5405 aaPredicted RBP5.12□□□□□ -1.59
CGRRF1-201ENST00000216420 SYNE1Q8NF91 8797 aaKnown RBP5.1□□□□□ -1.59
CGRRF1-201ENST00000216420 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
CGRRF1-201ENST00000216420 SPRR2FQ96RM1 72 aa5.03□□□□□ -1.6
CGRRF1-201ENST00000216420 KRTAP6-2Q3LI66 62 aa5.01□□□□□ -1.61
CGRRF1-201ENST00000216420 KRTAP2-2Q9BYT5 123 aa4.99□□□□□ -1.61
CGRRF1-201ENST00000216420 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.98□□□□□ -1.61
CGRRF1-201ENST00000216420 LCE1AQ5T7P2 110 aa4.88□□□□□ -1.63
CGRRF1-201ENST00000216420 KRTAP5-3Q6L8H2 238 aa4.84□□□□□ -1.63
CGRRF1-201ENST00000216420 KRTAP9-4Q9BYQ2 154 aa4.8□□□□□ -1.64
CGRRF1-201ENST00000216420 DSTQ03001 7570 aaKnown RBP4.8□□□□□ -1.64
CGRRF1-201ENST00000216420 SPRR2AP35326 72 aa4.67□□□□□ -1.66
CGRRF1-201ENST00000216420 KRTAP4-12Q9BQ66 201 aa4.63□□□□□ -1.67
CGRRF1-201ENST00000216420 MACF1Q9UPN3 7388 aaKnown RBP4.59□□□□□ -1.68
CGRRF1-201ENST00000216420 MT3P25713 68 aa4.58□□□□□ -1.68
CGRRF1-201ENST00000216420 SYNE2Q8WXH0 6885 aaKnown RBP4.57□□□□□ -1.68
CGRRF1-201ENST00000216420 SPRR2EP22531 72 aa4.56□□□□□ -1.68
CGRRF1-201ENST00000216420 KRTAP9-9Q9BYP9 154 aa4.54□□□□□ -1.68
CGRRF1-201ENST00000216420 KRTAP20-1Q3LI63 56 aa4.49□□□□□ -1.69
CGRRF1-201ENST00000216420 NEBP20929 6669 aa4.49□□□□□ -1.69
CGRRF1-201ENST00000216420 KRTAP5-9P26371 169 aa4.42□□□□□ -1.7
CGRRF1-201ENST00000216420 SPRR2BP35325 72 aa4.42□□□□□ -1.7
CGRRF1-201ENST00000216420 LCE1EQ5T753 118 aa4.39□□□□□ -1.71
CGRRF1-201ENST00000216420 LCE1DQ5T752 114 aa4.31□□□□□ -1.72
CGRRF1-201ENST00000216420 SPRR2DP22532 72 aa4.3□□□□□ -1.72
CGRRF1-201ENST00000216420 GPR98Q8WXG9 6306 aa4.29□□□□□ -1.72
CGRRF1-201ENST00000216420 MDN1Q9NU22 5596 aa4.26□□□□□ -1.73
CGRRF1-201ENST00000216420 KRTAP4-2Q9BYR5 136 aa4.22□□□□□ -1.73
CGRRF1-201ENST00000216420 OBSCNQ5VST9 7968 aa4.19□□□□□ -1.74
CGRRF1-201ENST00000216420 KRTAP4-11Q9BYQ6 195 aa4.05□□□□□ -1.76
CGRRF1-201ENST00000216420 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
CGRRF1-201ENST00000216420 KRTAP5-4Q6L8H1 288 aa4.04□□□□□ -1.76
CGRRF1-201ENST00000216420 KRTAP5-2Q701N4 177 aa3.9□□□□□ -1.78
CGRRF1-201ENST00000216420 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
CGRRF1-201ENST00000216420 MUC5ACP98088 5654 aa3.86□□□□□ -1.79
CGRRF1-201ENST00000216420 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
CGRRF1-201ENST00000216420 KRTAP20-2Q3LI61 65 aa3.72□□□□□ -1.81
CGRRF1-201ENST00000216420 AHNAK2Q8IVF2 5795 aa3.59□□□□□ -1.84
CGRRF1-201ENST00000216420 KRTAP5-7Q6L8G8 165 aa3.57□□□□□ -1.84
CGRRF1-201ENST00000216420 MT4P47944 62 aa3.55□□□□□ -1.84
CGRRF1-201ENST00000216420 KRTAP21-1Q3LI58 79 aa3.53□□□□□ -1.84
CGRRF1-201ENST00000216420 LCE1BQ5T7P3 118 aa3.49□□□□□ -1.85
CGRRF1-201ENST00000216420 HMCN1Q96RW7 5635 aa3.46□□□□□ -1.86
CGRRF1-201ENST00000216420 LCE1FQ5T754 118 aa3.45□□□□□ -1.86
CGRRF1-201ENST00000216420 LCE1CQ5T751 118 aa3.43□□□□□ -1.86
CGRRF1-201ENST00000216420 KRTAP21-2Q3LI59 83 aa3.35□□□□□ -1.87
CGRRF1-201ENST00000216420 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.35□□□□□ -1.87
CGRRF1-201ENST00000216420 AHNAKQ09666 5890 aaKnown RBP3.32□□□□□ -1.88
CGRRF1-201ENST00000216420 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
CGRRF1-201ENST00000216420 KRTAP4-4Q9BYR3 166 aa2.94□□□□□ -1.94
CGRRF1-201ENST00000216420 KRTAP5-8O75690 187 aa2.91□□□□□ -1.94
CGRRF1-201ENST00000216420 KRTAP5-11Q6L8G4 156 aa2.9□□□□□ -1.95
CGRRF1-201ENST00000216420 MUC19Q7Z5P9 8384 aa2.84□□□□□ -1.95
CGRRF1-201ENST00000216420 PHGR1C9JFL3 82 aa2.49□□□□□ -2.01
CGRRF1-201ENST00000216420 MUC16Q8WXI7 14507 aa1.75□□□□□ -2.13
Retrieved 77 of 20,778 RNA–protein pairs in 12.1 ms