RNA–Protein interactions for RNA: ENST00000183605.9

CLDN18-201, Transcript of claudin 18, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLDN18, Length 3,520 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-201ENST00000183605 KRTAP12-4P60329 112 aa3.4□□□□□ -1.86
CLDN18-201ENST00000183605 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.38□□□□□ -1.87
CLDN18-201ENST00000183605 KRTAP19-7Q3SYF9 63 aa3.32□□□□□ -1.88
CLDN18-201ENST00000183605 KRTAP6-3Q3LI67 103 aa3.3□□□□□ -1.88
CLDN18-201ENST00000183605 MT1LQ93083 61 aa3.3□□□□□ -1.88
CLDN18-201ENST00000183605 MT1GP13640 62 aa3.27□□□□□ -1.89
CLDN18-201ENST00000183605 KRTAP19-4Q3LI73 84 aa3.27□□□□□ -1.89
CLDN18-201ENST00000183605 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
CLDN18-201ENST00000183605 KRTAP9-7A8MTY7 169 aa3.25□□□□□ -1.89
CLDN18-201ENST00000183605 KRTAP5-9P26371 169 aa3.25□□□□□ -1.89
CLDN18-201ENST00000183605 MT1EP04732 61 aa3.24□□□□□ -1.89
CLDN18-201ENST00000183605 FCGBPQ9Y6R7 5405 aaPredicted RBP3.23□□□□□ -1.89
CLDN18-201ENST00000183605 SYNE1Q8NF91 8797 aaKnown RBP3.23□□□□□ -1.89
CLDN18-201ENST00000183605 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
CLDN18-201ENST00000183605 LCE3BQ5TA77 95 aa3.18□□□□□ -1.9
CLDN18-201ENST00000183605 OBSCNQ5VST9 7968 aa3.18□□□□□ -1.9
CLDN18-201ENST00000183605 LCE5AQ5TCM9 118 aa3.18□□□□□ -1.9
CLDN18-201ENST00000183605 KRTAP9-4Q9BYQ2 154 aa3.15□□□□□ -1.9
CLDN18-201ENST00000183605 LCE4AQ5TA78 99 aa3.15□□□□□ -1.91
CLDN18-201ENST00000183605 DSTQ03001 7570 aaKnown RBP3.13□□□□□ -1.91
CLDN18-201ENST00000183605 KRTAP4-9Q9BYQ8 210 aa3.1□□□□□ -1.91
CLDN18-201ENST00000183605 NEBP20929 6669 aa3.09□□□□□ -1.91
CLDN18-201ENST00000183605 KRTAP9-9Q9BYP9 154 aa3.09□□□□□ -1.92
CLDN18-201ENST00000183605 PRM1P04553 51 aa3.04□□□□□ -1.92
CLDN18-201ENST00000183605 LCE1FQ5T754 118 aa3.04□□□□□ -1.92
CLDN18-201ENST00000183605 MT1MQ8N339 61 aa3.04□□□□□ -1.92
CLDN18-201ENST00000183605 LCE3DQ9BYE3 92 aa3.03□□□□□ -1.92
CLDN18-201ENST00000183605 LCE3EQ5T5B0 92 aa3.01□□□□□ -1.93
CLDN18-201ENST00000183605 KRTAP19-3Q7Z4W3 81 aa3.01□□□□□ -1.93
CLDN18-201ENST00000183605 MUC12Q9UKN1 5478 aa2.98□□□□□ -1.93
CLDN18-201ENST00000183605 MACF1Q9UPN3 7388 aaKnown RBP2.96□□□□□ -1.94
CLDN18-201ENST00000183605 LCE1AQ5T7P2 110 aa2.96□□□□□ -1.94
CLDN18-201ENST00000183605 SPRR2FQ96RM1 72 aa2.95□□□□□ -1.94
CLDN18-201ENST00000183605 KRTAP20-1Q3LI63 56 aa2.89□□□□□ -1.95
CLDN18-201ENST00000183605 MT1AP04731 61 aa2.85□□□□□ -1.95
CLDN18-201ENST00000183605 SYNE2Q8WXH0 6885 aaKnown RBP2.85□□□□□ -1.95
CLDN18-201ENST00000183605 KRTAP6-1Q3LI64 71 aa2.84□□□□□ -1.95
CLDN18-201ENST00000183605 KRTAP2-2Q9BYT5 123 aa2.84□□□□□ -1.96
CLDN18-201ENST00000183605 LCE1EQ5T753 118 aa2.81□□□□□ -1.96
CLDN18-201ENST00000183605 KRTAP6-2Q3LI66 62 aa2.78□□□□□ -1.96
CLDN18-201ENST00000183605 KRTAP5-5Q701N2 237 aaPredicted RBP2.78□□□□□ -1.96
CLDN18-201ENST00000183605 SPRR2EP22531 72 aa2.69□□□□□ -1.98
CLDN18-201ENST00000183605 SPRR2BP35325 72 aa2.69□□□□□ -1.98
CLDN18-201ENST00000183605 SPRR2AP35326 72 aa2.69□□□□□ -1.98
CLDN18-201ENST00000183605 MDN1Q9NU22 5596 aa2.69□□□□□ -1.98
CLDN18-201ENST00000183605 KRTAP5-4Q6L8H1 288 aa2.68□□□□□ -1.98
CLDN18-201ENST00000183605 SPRR2DP22532 72 aa2.63□□□□□ -1.99
CLDN18-201ENST00000183605 LCE1DQ5T752 114 aa2.63□□□□□ -1.99
CLDN18-201ENST00000183605 MT3P25713 68 aa2.57□□□□□ -2
CLDN18-201ENST00000183605 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
CLDN18-201ENST00000183605 KRTAP4-6Q9BYQ5 205 aa2.53□□□□□ -2
CLDN18-201ENST00000183605 KRTAP5-10Q6L8G5 202 aa2.45□□□□□ -2.02
CLDN18-201ENST00000183605 KRTAP5-7Q6L8G8 165 aa2.45□□□□□ -2.02
CLDN18-201ENST00000183605 GPR98Q8WXG9 6306 aa2.43□□□□□ -2.02
CLDN18-201ENST00000183605 AHNAK2Q8IVF2 5795 aa2.41□□□□□ -2.02
CLDN18-201ENST00000183605 KRTAP5-3Q6L8H2 238 aa2.4□□□□□ -2.03
CLDN18-201ENST00000183605 HMCN1Q96RW7 5635 aa2.39□□□□□ -2.03
CLDN18-201ENST00000183605 KRTAP5-2Q701N4 177 aa2.39□□□□□ -2.03
CLDN18-201ENST00000183605 KRTAP4-12Q9BQ66 201 aa2.36□□□□□ -2.03
CLDN18-201ENST00000183605 MT4P47944 62 aa2.33□□□□□ -2.04
CLDN18-201ENST00000183605 KRTAP20-2Q3LI61 65 aa2.31□□□□□ -2.04
CLDN18-201ENST00000183605 KRTAP4-11Q9BYQ6 195 aa2.29□□□□□ -2.04
CLDN18-201ENST00000183605 LCE1BQ5T7P3 118 aa2.23□□□□□ -2.05
CLDN18-201ENST00000183605 MUC5BQ9HC84 5762 aaPredicted RBP2.21□□□□□ -2.05
CLDN18-201ENST00000183605 AHNAKQ09666 5890 aaKnown RBP2.18□□□□□ -2.06
CLDN18-201ENST00000183605 KRTAP5-8O75690 187 aa2.14□□□□□ -2.07
CLDN18-201ENST00000183605 MUC5ACP98088 5654 aa2.1□□□□□ -2.07
CLDN18-201ENST00000183605 KRTAP5-1Q6L8H4 278 aa2.02□□□□□ -2.09
CLDN18-201ENST00000183605 KRTAP4-2Q9BYR5 136 aa2.01□□□□□ -2.09
CLDN18-201ENST00000183605 KRTAP4-4Q9BYR3 166 aa1.86□□□□□ -2.11
CLDN18-201ENST00000183605 LCE1CQ5T751 118 aa1.84□□□□□ -2.11
CLDN18-201ENST00000183605 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.83□□□□□ -2.12
CLDN18-201ENST00000183605 KRTAP21-1Q3LI58 79 aa1.75□□□□□ -2.13
CLDN18-201ENST00000183605 KRTAP5-11Q6L8G4 156 aa1.73□□□□□ -2.13
CLDN18-201ENST00000183605 KRTAP21-2Q3LI59 83 aa1.71□□□□□ -2.14
CLDN18-201ENST00000183605 PHGR1C9JFL3 82 aa1.42□□□□□ -2.18
CLDN18-201ENST00000183605 MUC16Q8WXI7 14507 aa1.08□□□□□ -2.24
Retrieved 77 of 20,778 RNA–protein pairs in 45.8 ms