RNA–Protein interactions for RNA: ENSMUST00000209611.1

Sh3rf1-202, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

TSL 1 (best) BASIC

Gene Sh3rf1, Length 4,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-202ENSMUST00000209611 Tax1bp3Q9DBG9 124 aa7.46□□□□□ -1.21
Sh3rf1-202ENSMUST00000209611 Trdv1A0A075B657 112 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm28539A0A087WSL9 92 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Tmem262D3Z338 116 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm28044L7N1X0 119 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Shisal1Q0VBP7 198 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Nbl1Q61477 178 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 HilpdaQ9JLS0 64 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Trdv2-1A0A0G2JGB9 116 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ighv1-77A0A0G2JGS9 117 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 PigyP0C1P0 71 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Trdv2-2Q5R1A4 116 aa7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 AcanQ61282 2132 aaKnown RBP7.46□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Pde6hP61249 83 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ccl21aP84444 133 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ccl21bP86792 133 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ccl21cP86793 133 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Lrcol1Q3URS3 161 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Vwc2lQ505H4 222 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Cryba4Q9JJV0 196 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm17455G3UW87 128 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm26727M0QWT1 121 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 P01643 108 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr1419Q7TQS2 343 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Cysltr1Q99JA4 352 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Nat6Q9R123 314 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Akap6E9Q9K8 2307 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm21874J3QNZ6 232 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 TbpP29037 316 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Map1lc3aQ91VR7 121 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Myo9aQ8C170 2542 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ighv1-4A0A075B5T4 117 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm20726G3UX18 150 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Rpl32P62911 135 aaKnown RBP7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Cox11Q6P8I6 275 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Fam19a2Q7TPG7 131 aa7.45□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ncoa6Q9JL19 2067 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ighv1-22A0A075B5U7 117 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm5426J3QNM7 103 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Khdc1aQ3UWR2 166 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Khdc1cQ4KL78 166 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr982Q8VGB3 321 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 MymxQ2Q5T5 84 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Q9CX63 252 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Zfp951A0A087WRH0 451 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm5157A0A087WRH8 301 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ang2Q64438 145 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Tmem91Q8C581 172 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Q9D7E4 109 aa7.44□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Trav21-dv12A0A075B6C4 109 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm11444F6QMA6 170 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Samd5Q3V1H9 173 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Usmg5Q78IK2 58 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Lypd1Q8BLC3 141 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr1012Q8VFJ7 311 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ighv1-74A0A0G2JGK2 117 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm10118Q8C8J5 116 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Lyg1Q9D7Q0 197 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Sec11aQ9R0P6 179 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Srp14P16254 110 aaKnown RBP7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Csmd1Q923L3 3564 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm9913Q8BQQ2 135 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Fbxl15Q91W61 300 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Spink12Q9D256 87 aa7.43□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ly86O88188 162 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm16686Q3UMN9 131 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Trav14n-3A0A075B645 120 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 BlcapP62951 87 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 LystP97412 3788 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm45623A0A1B0GSF6 103 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm11565A2A4M7 156 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr235E9Q9Z6 312 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Col8a1Q00780 744 aa7.42□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm29289A0A087WPY7 166 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Shisal2aA2A9G7 189 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Tex48Q9DA81 110 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm6871L7N248 545 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Wipf2Q6PEV3 440 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr904Q7TRC9 310 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Trbv30A0A0B4J1P1 111 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr317Q5NCD6 327 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr1380Q7TQT5 311 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Cyyr1Q8VIH7 165 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm10521E9PZK0 135 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Pex7P97865 318 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Cox7a2lQ61387 111 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 March3Q8BRX9 218 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr1199Q8VF94 310 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Dpm2Q9Z324 84 aa7.41□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 1700056E22RikF7CNM6 234 aa7.4□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr1381Q7TQT4 311 aa7.4□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Olfr745Q7TRL9 328 aa7.4□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 D630044L22RikQ8C701 164 aa7.4□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 GlmpQ9JHJ3 404 aa7.4□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Ebi3O35228 228 aa7.4□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Npc2Q9Z0J0 149 aa7.4□□□□□ -1.22
Sh3rf1-202ENSMUST00000209611 Gm21994F6T2D2 329 aa7.4□□□□□ -1.23
Sh3rf1-202ENSMUST00000209611 Trav16nA0A075B634 117 aa7.39□□□□□ -1.23
Sh3rf1-202ENSMUST00000209611 Tmem141A2AJB2 108 aa7.39□□□□□ -1.23
Sh3rf1-202ENSMUST00000209611 F11rO88792 300 aa7.39□□□□□ -1.23
Retrieved 100 of 22,080 RNA–protein pairs in 48.5 ms