RNA–Protein interactions for RNA: ENSMUST00000139560.7

Ndc1-204, Transcript of Nucleoporin NDC1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ndc1, Length 4,584 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1-204ENSMUST00000139560 Myo15aQ9QZZ4 3511 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Plscr4P58196 326 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Hrct1Q9D6B9 109 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Iah1Q9DB29 249 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Igkv5-37A0A140T8N4 115 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 3110021N24RikJ3QMN2 152 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 PkigO70139 76 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Myo18bE9PV66 2605 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Igkv4-80A0A075B5L7 116 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Wt1P22561 449 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ss18Q62280 418 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Prss58Q8BW11 241 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 SNORCQ9CXL7 121 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 SetxA2AKX3 2646 aa9.32□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Trav6-4A0A075B6B4 115 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Igkv6-15A0A140T8M5 115 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Tcrg-C3L7N479 172 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 P03985 172 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 CrygbP04344 175 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Zfp36l1P23950 338 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 MdfiP70331 251 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Defa25Q5G864 92 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Gm19684G3UZ45 117 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Rnf5O35445 180 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Hist1h4aP62806 103 aaKnown RBP9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ang2Q64438 145 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ighv14-1A0A075B5R4 117 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Trav14-3A0A075B607 120 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Gm10521E9PZK0 135 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 PmvkQ9D1G2 192 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Plxnb3Q9QY40 1902 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 TrrapQ80YV3 2565 aaKnown RBP9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Trav14n-2A0A0G2JDF5 121 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Gm20708H3BKF4 155 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 CntfrO88507 372 aa9.31□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Iglv1A0A075B663 117 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 H2al1jA2BFR3 109 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Gm7102J3QQ10 178 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Hspe1Q64433 102 aaKnown RBP9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 SpinklQ8CEK3 90 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Gm15294V9GXA7 121 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Trav6n-6A0A075B6B2 114 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Hbb-b2P02089 147 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Mrps21P58059 87 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ighv1-62-2A0A0A6YXZ4 119 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Trbv30A0A0B4J1P1 111 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Tmem238A9JSM3 176 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Scgb1b2O35176 93 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Mapk1ip1lQ8BH93 242 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Parm1Q923D3 296 aa9.3□□□□□ -0.92
Ndc1-204ENSMUST00000139560 MsmbO08540 113 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Sigmar1O55242 223 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Tm2d1Q99MB3 208 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Olfr312Q7TRZ9 308 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 MtorQ9JLN9 2549 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Igkv4-81A0A0G2JEY5 119 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Gm17455G3UW87 128 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Spsb3Q571F5 354 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Tomm7Q9D173 55 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Pradc1Q9D9N8 188 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Igkv4-70A0A0B4J1I5 116 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Igkv20-101-2A0A0G2JDU3 113 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Tpsab1Q02844 273 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Kif26aQ52KG5 1881 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 TdhQ8K3F7 373 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ube2e2Q91W82 201 aa9.29□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Amn1B8JKV0 258 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 P01812 117 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Fam240bJ3QMB3 78 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ndufc2Q9CQ54 120 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Atp6v0e1Q9CQD8 81 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Pygo1Q9D0P5 417 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ighv1-80A0A075B5Y3 117 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Hbb-bsA8DUK4 147 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Hbb-b1P02088 147 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Pear1Q8VIK5 1034 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 RetnQ99P87 114 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Tax1bp3Q9DBG9 124 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Nit2Q9JHW2 276 aa9.28□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Trbv13-1A0A0B4J1P8 112 aa9.27□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Itgb1bp1O35671 200 aa9.27□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Cela2aP05208 271 aa9.27□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Cox6b1P56391 86 aaKnown RBP9.27□□□□□ -0.92
Ndc1-204ENSMUST00000139560 9930022D16RikQ8BG27 128 aa9.27□□□□□ -0.92
Ndc1-204ENSMUST00000139560 Ighv1-55A0A075B5W6 117 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Gm7257D3YX25 99 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Dmrt3Q80WT2 476 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Wfdc2Q9DAU7 174 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Pfn2Q9JJV2 140 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Zfp462B1AWL2 2495 aaKnown RBP9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Ighv1-19A0A0A6YWX0 117 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Lgals6O54891 301 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Hoxd3P09027 433 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Usmg5Q78IK2 58 aa9.27□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Anapc1P53995 1944 aaKnown RBP9.26□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Nxph4G3X9N5 304 aa9.26□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Fstl3Q9EQC7 256 aa9.26□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Ighv3-4A0A0A6YXF1 117 aa9.26□□□□□ -0.93
Ndc1-204ENSMUST00000139560 NpsP0C0P8 89 aa9.26□□□□□ -0.93
Ndc1-204ENSMUST00000139560 Spry4Q9WTP2 300 aa9.26□□□□□ -0.93
Retrieved 100 of 22,080 RNA–protein pairs in 1473.4 ms