RNA–Protein interactions for RNA: ENSMUST00000119954.8

Pcf11-201, Transcript of Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcf11, Length 5,995 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11-201ENSMUST00000119954 Zc2hc1bQ9D534 172 aa14.02□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Igkv2-137A0A0B4J1H6 120 aa14.02□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Sptbn1Q62261 2363 aaKnown RBP14.02□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Srsf2Q62093 221 aaKnown RBP14.02□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Baz2aQ91YE5 1889 aaKnown RBP14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Ndufs7Q9DC70 224 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Ighv1-39A0A075B5V5 117 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Wfdc2Q9DAU7 174 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 SisF8VQM5 1818 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Alpk2Q91ZB0 2144 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm815Q3UWS2 115 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Znrf2Q71FD5 238 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Q8C708 225 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Ighv1-55A0A075B5W6 117 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 P01725 110 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 SelenowP63300 88 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Rmi2Q3UPE3 149 aa14.01□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Cela2aP05208 271 aa14□□□□□ -0.17
Pcf11-201ENSMUST00000119954 P01738 130 aa14□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm10384Q3UQ87 92 aa14□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Fam241bQ9D882 120 aa14□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Lyg1Q9D7Q0 197 aa14□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Rnf144bQ8BKD6 301 aa14□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Dicer1Q8R418 1916 aa14□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm15091B1AZM2 449 aa13.99□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Atad5Q4QY64 1826 aa13.99□□□□□ -0.17
Pcf11-201ENSMUST00000119954 4930447F04RikA2AFR2 126 aa13.99□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Ly6g5bQ8K1T4 194 aa13.99□□□□□ -0.17
Pcf11-201ENSMUST00000119954 GlrxQ9QUH0 107 aa13.99□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Ppp1r32Q148A4 427 aa13.99□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Klk11Q9QYN3 276 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 P01786 117 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 P01791 123 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 A0A1L1SR50 188 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 NpsP0C0P8 89 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Smim10l1A0A087WNQ7 89 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 1700084M14RikB1AT01 78 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 3110021N24RikJ3QMN2 152 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Cd24P24807 76 aa13.98□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Zfp36l1P23950 338 aa13.97□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Ube2bP63147 152 aa13.97□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Lmo1Q924W9 156 aa13.97□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Lhfpl1Q80SV1 220 aa13.97□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm11733Q8BQP1 125 aa13.97□□□□□ -0.17
Pcf11-201ENSMUST00000119954 A730015C16RikQ8C992 119 aa13.97□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Ighv13-2A0A0A6YWN3 119 aa13.97□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm20499D3Z4G5 72 aa13.96□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm5129F6YHA9 99 aa13.96□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Prp2P05143 317 aa13.96□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gpr179E9PY61 2293 aa13.96□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm17455G3UW87 128 aa13.96□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Gm9936Q8C864 160 aa13.96□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Defb47Q30KN1 79 aa13.96□□□□□ -0.17
Pcf11-201ENSMUST00000119954 Smim20D3Z7Q2 69 aa13.96□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Fer1l5P0DM40 2038 aa13.96□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Slc25a29Q8BL03 306 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Spata25Q9DA57 226 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Tmem263Q9DAM7 115 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Minos1Q7TNS2 76 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Zfhx2Q2MHN3 2562 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Nrxn2E9Q7X7 1710 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Myo16Q5DU14 1919 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 CrebbpP45481 2441 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 3110082J24RikF6Z6Z2 108 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Gm19684G3UZ45 117 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Prok1Q14A28 105 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Prok2Q9QXU7 128 aa13.95□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Colca2F8VPY8 239 aa13.94□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Ucn2Q99ML8 113 aa13.94□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Cysrt1Q9D1E4 142 aa13.94□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Synj2bpQ9D6K5 145 aa13.94□□□□□ -0.18
Pcf11-201ENSMUST00000119954 P01739 132 aa13.94□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Ighv5-9-1A0A0A6YVS4 126 aa13.93□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Ang4Q3TMQ6 144 aa13.93□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Gtsf1Q9DAN6 167 aa13.93□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Gm10881P01642 115 aa13.93□□□□□ -0.18
Pcf11-201ENSMUST00000119954 P01837 106 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Nbl1Q61477 178 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Ube2e1P52482 193 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Dand5Q76LW6 185 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Ly6c1P0CW02 131 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 BC048562Q80ZQ7 204 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Lst1O08843 95 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 P01649 108 aa13.92□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Polr2aP08775 1970 aaKnown RBP13.91□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Cacna1eQ61290 2272 aa13.91□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Zfp36P22893 319 aaKnown RBP13.91□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Gm12830F6XVH0 157 aa13.91□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Cep250Q60952 2414 aa13.91□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Gm20730A0A075B5J6 119 aa13.91□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Tspoap1Q7TNF8 1846 aa13.91□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Atp5eP56382 52 aa13.9□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Ighv1-19A0A0A6YWX0 117 aa13.9□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Prh1P05142 261 aa13.9□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Foxf1Q61080 378 aa13.9□□□□□ -0.18
Pcf11-201ENSMUST00000119954 Med13Q5SWW4 2171 aa13.9□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Cdpf1Q8R3A2 119 aa13.89□□□□□ -0.19
Pcf11-201ENSMUST00000119954 Igkv5-37A0A140T8N4 115 aa13.89□□□□□ -0.19
Pcf11-201ENSMUST00000119954 MifP34884 115 aaKnown RBP13.89□□□□□ -0.19
Pcf11-201ENSMUST00000119954 AmelxP63277 210 aa13.89□□□□□ -0.19
Retrieved 100 of 22,080 RNA–protein pairs in 123 ms