RNA–Protein interactions for RNA: ENSMUST00000045312.5

Smc1a-201, Transcript of Structural maintenance of chromosomes protein 1A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Smc1a, Length 4,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1a-201ENSMUST00000045312 Igkv6-13A0A0G2JGY3 119 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Zfp36P22893 319 aaKnown RBP5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 HampQ9EQ21 83 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Prr12E9PYL2 2035 aaKnown RBP5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Col4a6B1AVK5 1691 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Igkv19-93A0A0G2JFZ3 115 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 P01739 132 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Wt1P22561 449 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Dtx1Q61010 627 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Shisa9Q9CZN4 424 aa5.66□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Gm17455G3UW87 128 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 P01726 129 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 LtaP09225 202 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Lynx1P0DP60 116 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Tcl1b4P56844 120 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 March3Q8BRX9 218 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Igkv13-85A0A075B666 115 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Amn1B8JKV0 258 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 1700067P10RikG3X8U2 183 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Ly6lH3BJG9 140 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 P18532 116 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 NpbQ8K4P1 119 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 PmvkQ9D1G2 192 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Gm15294V9GXA7 121 aa5.65□□□□□ -1.5
Smc1a-201ENSMUST00000045312 Igsf23B2RTN2 239 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm17660B9UIU9 90 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Nxph4G3X9N5 304 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Rnf5O35445 180 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ang5Q5GAN1 145 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Brk1Q91VR8 75 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ighv1-19A0A0A6YWX0 117 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Trbv30A0A0B4J1P1 111 aa5.65□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Igkv14-100A0A0G2JG36 117 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Wfdc11A2A5H7 82 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Rbm3O89086 153 aaKnown RBP5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Tctex1d4Q8CDY7 219 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Plxnb3Q9QY40 1902 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm29666A0A087WQ99 126 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 MalO09198 153 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 GhrhP16043 103 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ndufa4Q62425 82 aaKnown RBP5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Igkv4-53A0A0G2JFC6 119 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm9513B3GLJ6 99 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Spink1P09036 80 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Smim26Q3V460 107 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 MplkipQ9D011 178 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Pcnx2Q5DU28 2122 aa5.64□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Trav4n-4A0A075B615 110 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Socs3O35718 225 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 CntfrO88507 372 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm10645Q3UPY1 145 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Il1f10Q8R459 152 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 TroQ6DIC6 2087 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm28038F7BCN9 126 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Sdhaf1Q3U276 118 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ss18Q62280 418 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Rasl10aQ8K5A4 203 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm16381A0A1Y7VKT9 73 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Pde6hP61249 83 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ntf4Q80VU4 209 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Trav7-6A0A075B640 112 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 PspnO70300 156 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Defb33Q30KN3 62 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ss18l1Q8BW22 402 aa5.63□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Trdv5A0A075B661 115 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Smim10l1A0A087WNQ7 89 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 4930415O20RikQ8CDT5 131 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Nup210Q9QY81 1886 aaKnown RBP5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm33815A0A087WNV3 176 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 P01658 132 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 P0C1Z5 52 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Msrb2Q78J03 175 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Klf13Q9JJZ6 289 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Sorl1O88307 2215 aaKnown RBP5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm15091B1AZM2 449 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 P01674 108 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 P01680 129 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 5730522E02RikQ5SP45 163 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 H1fxQ80ZM5 188 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Gm9944Q8C559 102 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ighv1-62-3P01754 117 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Rchy1Q9CR50 261 aa5.62□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Igkv4-70A0A0B4J1I5 116 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Igkv4-62A0A0G2JDW9 117 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Igkv14-130A0A0G2JF45 117 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 P01655 112 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 P01802 115 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Edn2P22389 175 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Cd27P41272 250 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Olfr313Q5NC55 308 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Ifitm2Q99J93 144 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Spink12Q9D256 87 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Fam241bQ9D882 120 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Nlrc5C3VPR6 1915 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 C920008G01RikA0A0B4J1N1 112 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 SvipQ3UZP4 77 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 A530064D06RikQ8BNV8 229 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Spry4Q9WTP2 300 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Notch4P31695 1964 aa5.61□□□□□ -1.51
Smc1a-201ENSMUST00000045312 Folr2Q05685 251 aa5.61□□□□□ -1.51
Retrieved 100 of 22,080 RNA–protein pairs in 58.6 ms