RNA–Protein interactions for RNA: ENSMUST00000028280.13

Col5a1-201, Transcript of Collagen alpha-1(V) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col5a1, Length 8,406 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1-201ENSMUST00000028280 Igkv13-85A0A075B666 115 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 SostQ99P68 211 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ang6Q5GAN0 147 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Trav9d-4A0A0G2JG37 103 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Pnrc2Q9CR73 140 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Tnfrsf23Q9ER63 176 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Wfdc9Q3UW41 83 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Hrct1Q9D6B9 109 aa11.31□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Trav6d-7A0A075B6B0 112 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Gm10188Q3V432 135 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 PpbpQ9EQI5 113 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ighv1-76A0A0G2JFE9 117 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Gdf15Q9Z0J7 303 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ccl25O35903 144 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Lect2O88803 151 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Mrps21P58059 87 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 BC049762Q8C601 163 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Zcchc24B2RVL6 241 aaKnown RBP11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Pfn1P62962 140 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Col4a3Q9QZS0 1669 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Pou2af1Q64693 256 aa11.3□□□□□ -0.6
Col5a1-201ENSMUST00000028280 LenepQ9WVB6 61 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Arhgap32Q811P8 2089 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ang5Q5GAN1 145 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Pip4p2Q9CZX7 257 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Igkv20-101-2A0A0G2JDU3 113 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Gm28778A0A087WSK7 233 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Nbl1Q61477 178 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ighv1-18A0A0A6YXN4 117 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Cxcl13O55038 109 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Znf260Q62513 407 aa11.29□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Defb30Q30KN4 75 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 PtprsB0V2N1 1907 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Prop1P97458 223 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Tctex1d4Q8CDY7 219 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 GlrxQ9QUH0 107 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Igkv8-34A0A0G2JDU0 121 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 March3Q8BRX9 218 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 4930546C10RikE9Q4Y3 121 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 CrygsO35486 178 aa11.28□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Foxf2O54743 446 aa11.27□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Gm20379A0A087WR34 119 aa11.27□□□□□ -0.6
Col5a1-201ENSMUST00000028280 P01739 132 aa11.27□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ndufa12Q7TMF3 145 aaKnown RBP11.27□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Ucn2Q99ML8 113 aa11.27□□□□□ -0.6
Col5a1-201ENSMUST00000028280 Gm15091B1AZM2 449 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Rnf114Q9ET26 229 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Defb29Q8BGW9 78 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Spink4O35679 86 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Psmb11Q8BG41 302 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 SptssbQ925E8 76 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Zfhx2Q2MHN3 2562 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Igkv14-126A0A075B5K0 117 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 P01725 110 aa11.27□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Rbmy1bQ60990 380 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Ighv1-81A0A075B5Y4 117 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Tmem190Q9D2E9 166 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Igh-VJ558P01758 117 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 P01787 123 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Jmjd1cQ69ZK6 2350 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 BikO70337 150 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gm10912Q3UXH0 145 aa11.26□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Stpg1Q9D2F5 341 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Sp5Q9JHX2 398 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 NrtnP97463 195 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gm26558Q8BLW8 286 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 KprpB2RUR4 657 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 P01738 130 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Ndufa11Q9D8B4 141 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Sdhaf1Q3U276 118 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Clec4b2Q67DU8 208 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Mustn1Q99JI1 82 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 PcolceQ61398 468 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Ndufa4Q62425 82 aaKnown RBP11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Klk13Q8CGR6 276 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gm27027S4R1M6 97 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Fgf4P11403 202 aa11.25□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Igkv19-93A0A0G2JFZ3 115 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 IappP12968 93 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Dad1P61804 113 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Cdkn2aQ64364 169 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gm4763Q8CFJ5 196 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Acyp1P56376 99 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gm33815A0A087WNV3 176 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Tnfrsf26P83626 204 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 P01802 115 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Wipf2Q6PEV3 440 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Srsf2Q62093 221 aaKnown RBP11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 P01788 123 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Vpreb2P13373 142 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Sec61gP60060 68 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 ElnP54320 860 aa11.24□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Ighv1-23A0A0A6YVW3 117 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Ighv1-31A0A0A6YWK5 117 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Ighv1-36A0A0A6YXT2 117 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Zfp648D3Z0W3 525 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Olfr312Q7TRZ9 308 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Rpp25lQ99JH1 163 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 SelenowP63300 88 aa11.23□□□□□ -0.61
Col5a1-201ENSMUST00000028280 Gm10775Q3V290 127 aa11.23□□□□□ -0.61
Retrieved 100 of 22,080 RNA–protein pairs in 59.1 ms