RNA–Protein interactions for RNA: ENSMUST00000027127.13

Sf3b1-201, Transcript of Splicing factor 3B subunit 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sf3b1, Length 6,195 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b1-201ENSMUST00000027127 Gm1553Q66VB7 94 aa6.62□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Tctex1d4Q8CDY7 219 aa6.62□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Defa26Q3L180 93 aa6.62□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Srsf2Q62093 221 aaKnown RBP6.62□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Mrpl36Q99N90 102 aa6.62□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Obox1Q9D350 204 aa6.62□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 NdpP48744 131 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Mllt11P97783 90 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Srsf1Q6PDM2 248 aaKnown RBP6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Fbxl15Q91W61 300 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Phpt1Q9DAK9 124 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Defa16P50714 93 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Tomm7Q9D173 55 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Q9D727 114 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Mrpl32Q9DCI9 187 aaKnown RBP6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Abca7Q91V24 2159 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Igkv3-2A0A075B5P0 119 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 SeleQ00690 612 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Anapc13Q8R034 74 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Ormdl2Q9CQZ0 153 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm5089A1L3C8 106 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm12689Q8BQU9 117 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Bub3Q9WVA3 326 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Spcs1Q9D958 161 aa6.61□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Sec16aA2AIX1 2377 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm933J3QPC1 141 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Spink1P09036 80 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 PdpnQ62011 172 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm5105Q8C6Y9 112 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Fam241bQ9D882 120 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Ighv1-58A0A075B5W9 117 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Klk1b4P00757 256 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 SbpP15501 199 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Cks1bP61025 79 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Rchy1Q9CR50 261 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Dopey1Q8BL99 2399 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Ighv1-9A0A0A6YW37 117 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm17455G3UW87 128 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Pla2g2aP31482 146 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm10188Q3V432 135 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Ang6Q5GAN0 147 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 TdhQ8K3F7 373 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Igkv4-90A0A075B5L3 117 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Trav14n-2A0A0G2JDF5 121 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Defa2P28309 93 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gpx7Q99LJ6 186 aa6.6□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Cd27P41272 250 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Lyzl1Q9CPX3 148 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 OtorQ9JIE3 128 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm15557A6PWY0 234 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm5878E9PUB3 99 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Tdgf1P51865 171 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Nbl1Q61477 178 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 MycbQ6P8Z1 170 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Sap30O88574 220 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Dkk2Q9QYZ8 259 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Pet100P0DJE0 76 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Defb18Q30KP5 85 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Cysltr1Q99JA4 352 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gtsf1lQ9CWD0 151 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 TncQ80YX1 2110 aa6.59□□□□□ -1.35
Sf3b1-201ENSMUST00000027127 Gm11444F6QMA6 170 aa6.59□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 TtrP07309 147 aa6.59□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ighv1-53A0A075B5W3 117 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Igkv20-101-2A0A0G2JDU3 113 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ccl17F6R5P4 103 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm7489Q3UT34 171 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 LbhQ9CX60 105 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 KprpB2RUR4 657 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 SNORCQ9CXL7 121 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ebi3O35228 228 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ighv1-62-3P01754 117 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Znf575Q3TXZ1 239 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 3110018I06RikQ9CXS0 120 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ighv8-6A0A0A6YXA3 118 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Igkv4-70A0A0B4J1I5 116 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 AW146154Q3TPQ7 468 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 4930596D02RikQ3V0H9 216 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01802 115 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Pglyrp4Q0VB07 374 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 HilpdaQ9JLS0 64 aa6.58□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm45785A0A1B0GT05 94 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Abca4O35600 2310 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 A0A1Y7VMQ4 148 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Gm5819E9PZ96 154 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Hbb-b2P02089 147 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01793 123 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Sslp1Q3UN54 99 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Tmem86bQ497J1 226 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Fam24aQ8CF27 98 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 A0A286YE02 88 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Vmn1r197Q8R265 298 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Chchd5Q9CQP3 110 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Wisp2Q9Z0G4 251 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 P01741 114 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 7420426K07RikQ3UX66 186 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Rnf114Q9ET26 229 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Sec11aQ9R0P6 179 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Lama3Q61789 3330 aa6.57□□□□□ -1.36
Sf3b1-201ENSMUST00000027127 Ighv1-49A0A0A6YWX2 117 aa6.56□□□□□ -1.36
Retrieved 100 of 22,080 RNA–protein pairs in 45.8 ms