RNA–Protein interactions for RNA: ENST00000641891.1

PHGDH-229, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,175 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-229ENST00000641891 SPATA8Q6RVD6 105 aa8.8□□□□□ -1
PHGDH-229ENST00000641891 MIR22HGQ0VDD5 57 aa8.79□□□□□ -1
PHGDH-229ENST00000641891 KRTAP4-5Q9BYR2 181 aa8.76□□□□□ -1.01
PHGDH-229ENST00000641891 KTN1-AS1Q86SY8 53 aa8.66□□□□□ -1.02
PHGDH-229ENST00000641891 LPAP08519 4548 aa8.65□□□□□ -1.02
PHGDH-229ENST00000641891 KRTAP3-3Q9BYR6 98 aa8.64□□□□□ -1.03
PHGDH-229ENST00000641891 TPRXLQ17RH7 258 aa8.63□□□□□ -1.03
PHGDH-229ENST00000641891 H0YAA0 97 aa8.62□□□□□ -1.03
PHGDH-229ENST00000641891 ABCA13Q86UQ4 5058 aa8.62□□□□□ -1.03
PHGDH-229ENST00000641891 LRP2P98164 4655 aa8.61□□□□□ -1.03
PHGDH-229ENST00000641891 A0A1B0GU33 70 aa8.61□□□□□ -1.03
PHGDH-229ENST00000641891 H1FX-AS1Q4G0G2 97 aa8.59□□□□□ -1.03
PHGDH-229ENST00000641891 S4R3F8 94 aa8.57□□□□□ -1.04
PHGDH-229ENST00000641891 KRTAP10-6P60371 365 aaPredicted RBP8.48□□□□□ -1.05
PHGDH-229ENST00000641891 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.05
PHGDH-229ENST00000641891 KRTAP3-2Q9BYR7 98 aa8.45□□□□□ -1.06
PHGDH-229ENST00000641891 PRAC1Q96KF2 57 aa8.44□□□□□ -1.06
PHGDH-229ENST00000641891 H3BS24 57 aa8.43□□□□□ -1.06
PHGDH-229ENST00000641891 J3QL48 77 aa8.41□□□□□ -1.06
PHGDH-229ENST00000641891 RBM12B-AS1Q9P1G2 102 aa8.41□□□□□ -1.06
PHGDH-229ENST00000641891 KRTAP13-4Q3LI77 160 aa8.38□□□□□ -1.07
PHGDH-229ENST00000641891 P0C880 135 aa8.37□□□□□ -1.07
PHGDH-229ENST00000641891 HERC2O95714 4834 aa8.36□□□□□ -1.07
PHGDH-229ENST00000641891 SEC61BP60468 96 aaKnown RBP8.3□□□□□ -1.08
PHGDH-229ENST00000641891 KRTAP4-1Q9BYQ7 146 aa8.29□□□□□ -1.08
PHGDH-229ENST00000641891 A0A0D9SG42 100 aa8.28□□□□□ -1.08
PHGDH-229ENST00000641891 MUC17Q685J3 4493 aa8.27□□□□□ -1.09
PHGDH-229ENST00000641891 CSAG1Q6PB30 78 aa8.27□□□□□ -1.09
PHGDH-229ENST00000641891 BIRC6Q9NR09 4857 aa8.27□□□□□ -1.09
PHGDH-229ENST00000641891 K7ERS5 55 aa8.2□□□□□ -1.1
PHGDH-229ENST00000641891 KRTAP19-2Q3LHN2 52 aa8.08□□□□□ -1.12
PHGDH-229ENST00000641891 KRTAP12-2P59991 146 aa8.07□□□□□ -1.12
PHGDH-229ENST00000641891 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
PHGDH-229ENST00000641891 M0QZ58 72 aa8.03□□□□□ -1.12
PHGDH-229ENST00000641891 KRTAP12-1P59990 96 aa8.02□□□□□ -1.13
PHGDH-229ENST00000641891 ROMO1P60602 79 aa8.02□□□□□ -1.13
PHGDH-229ENST00000641891 PCLOQ9Y6V0 5065 aa8.01□□□□□ -1.13
PHGDH-229ENST00000641891 SPINT4Q6UDR6 99 aa8□□□□□ -1.13
PHGDH-229ENST00000641891 KRTAP25-1Q3LHN0 102 aa7.99□□□□□ -1.13
PHGDH-229ENST00000641891 MUC2Q02817 5179 aa7.99□□□□□ -1.13
PHGDH-229ENST00000641891 LINC01554Q52M75 96 aa7.98□□□□□ -1.13
PHGDH-229ENST00000641891 HERC1Q15751 4861 aa7.98□□□□□ -1.13
PHGDH-229ENST00000641891 LORP23490 312 aaPredicted RBP7.96□□□□□ -1.14
PHGDH-229ENST00000641891 R4GN34 69 aa7.93□□□□□ -1.14
PHGDH-229ENST00000641891 HMCN2Q8NDA2 5059 aa7.91□□□□□ -1.14
PHGDH-229ENST00000641891 FLGP20930 4061 aaPredicted RBP7.79□□□□□ -1.16
PHGDH-229ENST00000641891 C10orf95Q9H7T3 257 aa7.79□□□□□ -1.16
PHGDH-229ENST00000641891 A0A0A0MQY5 61 aa7.73□□□□□ -1.17
PHGDH-229ENST00000641891 LCE2CQ5TA81 110 aa7.7□□□□□ -1.18
PHGDH-229ENST00000641891 FAT4Q6V0I7 4981 aa7.62□□□□□ -1.19
PHGDH-229ENST00000641891 UBR4Q5T4S7 5183 aa7.56□□□□□ -1.2
PHGDH-229ENST00000641891 RNF213Q63HN8 5207 aa7.54□□□□□ -1.2
PHGDH-229ENST00000641891 MT1HP80294 61 aa7.5□□□□□ -1.21
PHGDH-229ENST00000641891 CAMK2N1Q7Z7J9 78 aa7.49□□□□□ -1.21
PHGDH-229ENST00000641891 M0R2T5 61 aa7.49□□□□□ -1.21
PHGDH-229ENST00000641891 KRTAP19-1Q8IUB9 90 aa7.36□□□□□ -1.23
PHGDH-229ENST00000641891 SPRR2GQ9BYE4 73 aa7.35□□□□□ -1.23
PHGDH-229ENST00000641891 MT1FP04733 61 aa7.33□□□□□ -1.24
PHGDH-229ENST00000641891 MT2AP02795 61 aa7.33□□□□□ -1.24
PHGDH-229ENST00000641891 KRTAP9-8Q9BYQ0 159 aa7.3□□□□□ -1.24
PHGDH-229ENST00000641891 KRTAP10-10P60014 251 aa7.29□□□□□ -1.24
PHGDH-229ENST00000641891 KRTAP15-1Q3LI76 137 aa7.23□□□□□ -1.25
PHGDH-229ENST00000641891 PLAC4Q8WY50 150 aa7.22□□□□□ -1.25
PHGDH-229ENST00000641891 TNP1P09430 55 aa7.16□□□□□ -1.26
PHGDH-229ENST00000641891 PP632Q6XCG6 107 aa7.15□□□□□ -1.27
PHGDH-229ENST00000641891 KRTAP19-8Q3LI54 63 aa7.07□□□□□ -1.28
PHGDH-229ENST00000641891 MT1BP07438 61 aa7.02□□□□□ -1.29
PHGDH-229ENST00000641891 KRTAP9-3Q9BYQ3 159 aa7□□□□□ -1.29
PHGDH-229ENST00000641891 KRTAP23-1A1A580 65 aa6.97□□□□□ -1.29
PHGDH-229ENST00000641891 NDUFAF8A1L188 74 aa6.94□□□□□ -1.3
PHGDH-229ENST00000641891 KRTAP10-5P60370 271 aa6.92□□□□□ -1.3
PHGDH-229ENST00000641891 MT1XP80297 61 aa6.91□□□□□ -1.3
PHGDH-229ENST00000641891 LCE3AQ5TA76 89 aa6.88□□□□□ -1.31
PHGDH-229ENST00000641891 LUZP6Q538Z0 58 aa6.82□□□□□ -1.32
PHGDH-229ENST00000641891 LCE2AQ5TA79 106 aaPredicted RBP6.81□□□□□ -1.32
PHGDH-229ENST00000641891 LCE2BO14633 110 aa6.78□□□□□ -1.32
PHGDH-229ENST00000641891 KRTAP10-7P60409 375 aaPredicted RBP6.71□□□□□ -1.33
PHGDH-229ENST00000641891 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
PHGDH-229ENST00000641891 KRTAP8-1Q8IUC2 63 aa6.66□□□□□ -1.34
PHGDH-229ENST00000641891 PRO2289Q9P1D8 64 aa6.64□□□□□ -1.35
PHGDH-229ENST00000641891 SPRR5A0A1B0GTR4 108 aa6.61□□□□□ -1.35
PHGDH-229ENST00000641891 USH2AO75445 5202 aa6.6□□□□□ -1.35
PHGDH-229ENST00000641891 KRTAP12-3P60328 96 aa6.53□□□□□ -1.36
PHGDH-229ENST00000641891 KMT2DO14686 5537 aa6.38□□□□□ -1.39
PHGDH-229ENST00000641891 KRTAP19-5Q3LI72 72 aa6.38□□□□□ -1.39
PHGDH-229ENST00000641891 KRTAP4-8A0A0G2JLE6 195 aa6.37□□□□□ -1.39
PHGDH-229ENST00000641891 KRTAP4-8Q9BYQ9 185 aa6.37□□□□□ -1.39
PHGDH-229ENST00000641891 SSPOA2VEC9 5147 aa6.25□□□□□ -1.41
PHGDH-229ENST00000641891 KRTAP19-7Q3SYF9 63 aa6.16□□□□□ -1.42
PHGDH-229ENST00000641891 LCE3CQ5T5A8 94 aa6.14□□□□□ -1.43
PHGDH-229ENST00000641891 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
PHGDH-229ENST00000641891 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
PHGDH-229ENST00000641891 MT1EP04732 61 aa6□□□□□ -1.45
PHGDH-229ENST00000641891 KRTAP4-7Q9BYR0 210 aa5.99□□□□□ -1.45
PHGDH-229ENST00000641891 MT1LQ93083 61 aa5.96□□□□□ -1.46
PHGDH-229ENST00000641891 KRTAP9-6A8MVA2 160 aa5.94□□□□□ -1.46
PHGDH-229ENST00000641891 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
PHGDH-229ENST00000641891 FCGBPQ9Y6R7 5405 aaPredicted RBP5.85□□□□□ -1.47
PHGDH-229ENST00000641891 KRTAP19-4Q3LI73 84 aa5.77□□□□□ -1.49
PHGDH-229ENST00000641891 KRTAP4-3Q9BYR4 195 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms