RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 RYR1P21817 5038 aa8.78□□□□□ -1
PHGDH-223ENST00000641597 KRTAP10-8P60410 259 aa8.77□□□□□ -1.01
PHGDH-223ENST00000641597 COX6B2Q6YFQ2 88 aa8.77□□□□□ -1.01
PHGDH-223ENST00000641597 LPAP08519 4548 aa8.74□□□□□ -1.01
PHGDH-223ENST00000641597 A0A1B0GU33 70 aa8.74□□□□□ -1.01
PHGDH-223ENST00000641597 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
PHGDH-223ENST00000641597 XP32Q5T750 250 aa8.68□□□□□ -1.02
PHGDH-223ENST00000641597 CSAG1Q6PB30 78 aa8.67□□□□□ -1.02
PHGDH-223ENST00000641597 KRTAP3-3Q9BYR6 98 aa8.65□□□□□ -1.02
PHGDH-223ENST00000641597 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.03
PHGDH-223ENST00000641597 LRP2P98164 4655 aa8.64□□□□□ -1.03
PHGDH-223ENST00000641597 EPPK1P58107 5090 aaKnown RBP8.64□□□□□ -1.03
PHGDH-223ENST00000641597 MT1HL1P0DM35 61 aa8.58□□□□□ -1.04
PHGDH-223ENST00000641597 ABCA13Q86UQ4 5058 aa8.57□□□□□ -1.04
PHGDH-223ENST00000641597 KRTAP10-6P60371 365 aaPredicted RBP8.56□□□□□ -1.04
PHGDH-223ENST00000641597 KRTAP13-4Q3LI77 160 aa8.55□□□□□ -1.04
PHGDH-223ENST00000641597 CRIPTQ9P021 101 aa8.53□□□□□ -1.04
PHGDH-223ENST00000641597 LINC01554Q52M75 96 aa8.5□□□□□ -1.05
PHGDH-223ENST00000641597 KRTAP3-2Q9BYR7 98 aa8.5□□□□□ -1.05
PHGDH-223ENST00000641597 A0A0D9SG42 100 aa8.5□□□□□ -1.05
PHGDH-223ENST00000641597 S4R3F8 94 aa8.48□□□□□ -1.05
PHGDH-223ENST00000641597 P0C880 135 aa8.47□□□□□ -1.05
PHGDH-223ENST00000641597 KRTAP4-5Q9BYR2 181 aa8.4□□□□□ -1.06
PHGDH-223ENST00000641597 KRTAP25-1Q3LHN0 102 aa8.33□□□□□ -1.08
PHGDH-223ENST00000641597 K7ERS5 55 aa8.31□□□□□ -1.08
PHGDH-223ENST00000641597 TPRXLQ17RH7 258 aa8.24□□□□□ -1.09
PHGDH-223ENST00000641597 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
PHGDH-223ENST00000641597 ROMO1P60602 79 aa8.22□□□□□ -1.09
PHGDH-223ENST00000641597 C10orf95Q9H7T3 257 aa8.16□□□□□ -1.1
PHGDH-223ENST00000641597 SPINT4Q6UDR6 99 aa8.16□□□□□ -1.1
PHGDH-223ENST00000641597 MUC2Q02817 5179 aa8.14□□□□□ -1.11
PHGDH-223ENST00000641597 KRTAP12-1P59990 96 aa8.12□□□□□ -1.11
PHGDH-223ENST00000641597 MUC17Q685J3 4493 aa8.11□□□□□ -1.11
PHGDH-223ENST00000641597 A0A0A0MQY5 61 aa8.1□□□□□ -1.11
PHGDH-223ENST00000641597 KRTAP4-1Q9BYQ7 146 aa8.09□□□□□ -1.11
PHGDH-223ENST00000641597 HERC2O95714 4834 aa8.09□□□□□ -1.11
PHGDH-223ENST00000641597 LORP23490 312 aaPredicted RBP8□□□□□ -1.13
PHGDH-223ENST00000641597 M0QZ58 72 aa7.98□□□□□ -1.13
PHGDH-223ENST00000641597 J3QL48 77 aa7.97□□□□□ -1.13
PHGDH-223ENST00000641597 BIRC6Q9NR09 4857 aa7.96□□□□□ -1.14
PHGDH-223ENST00000641597 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
PHGDH-223ENST00000641597 R4GN34 69 aa7.9□□□□□ -1.15
PHGDH-223ENST00000641597 HERC1Q15751 4861 aa7.85□□□□□ -1.15
PHGDH-223ENST00000641597 KRTAP19-2Q3LHN2 52 aa7.84□□□□□ -1.15
PHGDH-223ENST00000641597 PCLOQ9Y6V0 5065 aa7.79□□□□□ -1.16
PHGDH-223ENST00000641597 FAT4Q6V0I7 4981 aa7.72□□□□□ -1.17
PHGDH-223ENST00000641597 FLGP20930 4061 aaPredicted RBP7.64□□□□□ -1.19
PHGDH-223ENST00000641597 HMCN2Q8NDA2 5059 aa7.61□□□□□ -1.19
PHGDH-223ENST00000641597 KRTAP15-1Q3LI76 137 aa7.61□□□□□ -1.19
PHGDH-223ENST00000641597 RNF213Q63HN8 5207 aa7.57□□□□□ -1.2
PHGDH-223ENST00000641597 CAMK2N1Q7Z7J9 78 aa7.51□□□□□ -1.21
PHGDH-223ENST00000641597 NDUFAF8A1L188 74 aa7.49□□□□□ -1.21
PHGDH-223ENST00000641597 UBR4Q5T4S7 5183 aa7.47□□□□□ -1.21
PHGDH-223ENST00000641597 LCE2CQ5TA81 110 aa7.4□□□□□ -1.22
PHGDH-223ENST00000641597 PLAC4Q8WY50 150 aa7.3□□□□□ -1.24
PHGDH-223ENST00000641597 M0R2T5 61 aa7.23□□□□□ -1.25
PHGDH-223ENST00000641597 KRTAP19-1Q8IUB9 90 aa7.2□□□□□ -1.26
PHGDH-223ENST00000641597 MT1HP80294 61 aa7.18□□□□□ -1.26
PHGDH-223ENST00000641597 LUZP6Q538Z0 58 aa7.14□□□□□ -1.27
PHGDH-223ENST00000641597 TNP1P09430 55 aa7.14□□□□□ -1.27
PHGDH-223ENST00000641597 PP632Q6XCG6 107 aa7.14□□□□□ -1.27
PHGDH-223ENST00000641597 SPRR2GQ9BYE4 73 aa7.13□□□□□ -1.27
PHGDH-223ENST00000641597 MT1FP04733 61 aa7.11□□□□□ -1.27
PHGDH-223ENST00000641597 MT2AP02795 61 aa7.07□□□□□ -1.28
PHGDH-223ENST00000641597 KRTAP10-10P60014 251 aa7.07□□□□□ -1.28
PHGDH-223ENST00000641597 KRTAP9-8Q9BYQ0 159 aa7.02□□□□□ -1.29
PHGDH-223ENST00000641597 LCE3AQ5TA76 89 aa6.91□□□□□ -1.3
PHGDH-223ENST00000641597 KRTAP23-1A1A580 65 aa6.85□□□□□ -1.31
PHGDH-223ENST00000641597 MT1BP07438 61 aa6.83□□□□□ -1.32
PHGDH-223ENST00000641597 KRTAP19-8Q3LI54 63 aa6.79□□□□□ -1.32
PHGDH-223ENST00000641597 KRTAP10-5P60370 271 aa6.78□□□□□ -1.32
PHGDH-223ENST00000641597 MT1XP80297 61 aa6.78□□□□□ -1.32
PHGDH-223ENST00000641597 USH2AO75445 5202 aa6.77□□□□□ -1.33
PHGDH-223ENST00000641597 SPRR5A0A1B0GTR4 108 aa6.74□□□□□ -1.33
PHGDH-223ENST00000641597 KRTAP9-3Q9BYQ3 159 aa6.7□□□□□ -1.34
PHGDH-223ENST00000641597 KRTAP10-7P60409 375 aaPredicted RBP6.65□□□□□ -1.34
PHGDH-223ENST00000641597 KMT2DO14686 5537 aa6.61□□□□□ -1.35
PHGDH-223ENST00000641597 KRTAP8-1Q8IUC2 63 aa6.61□□□□□ -1.35
PHGDH-223ENST00000641597 KRTAP10-12P60413 245 aa6.58□□□□□ -1.36
PHGDH-223ENST00000641597 LCE2BO14633 110 aa6.52□□□□□ -1.37
PHGDH-223ENST00000641597 KRTAP12-3P60328 96 aa6.52□□□□□ -1.37
PHGDH-223ENST00000641597 LCE2AQ5TA79 106 aaPredicted RBP6.45□□□□□ -1.38
PHGDH-223ENST00000641597 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
PHGDH-223ENST00000641597 KRTAP4-8A0A0G2JLE6 195 aa6.34□□□□□ -1.39
PHGDH-223ENST00000641597 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
PHGDH-223ENST00000641597 KRTAP19-5Q3LI72 72 aa6.33□□□□□ -1.4
PHGDH-223ENST00000641597 FSIP2Q5CZC0 6907 aa6.28□□□□□ -1.4
PHGDH-223ENST00000641597 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
PHGDH-223ENST00000641597 SSPOA2VEC9 5147 aa6.1□□□□□ -1.43
PHGDH-223ENST00000641597 KRTAP4-7Q9BYR0 210 aa6.09□□□□□ -1.43
PHGDH-223ENST00000641597 KRTAP9-6A8MVA2 160 aa6.06□□□□□ -1.44
PHGDH-223ENST00000641597 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
PHGDH-223ENST00000641597 FCGBPQ9Y6R7 5405 aaPredicted RBP5.84□□□□□ -1.47
PHGDH-223ENST00000641597 MT1EP04732 61 aa5.83□□□□□ -1.48
PHGDH-223ENST00000641597 MT1LQ93083 61 aa5.83□□□□□ -1.48
PHGDH-223ENST00000641597 MUC12Q9UKN1 5478 aa5.81□□□□□ -1.48
PHGDH-223ENST00000641597 INE1O15225 51 aa5.81□□□□□ -1.48
PHGDH-223ENST00000641597 KRTAP19-6Q3LI70 58 aa5.75□□□□□ -1.49
PHGDH-223ENST00000641597 KRTAP4-3Q9BYR4 195 aa5.72□□□□□ -1.49
PHGDH-223ENST00000641597 LOC100996750A0A140TA64 210 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 81.5 ms