RNA–Protein interactions for RNA: ENST00000640056.1

HNRNPU-224, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-224ENST00000640056 KRTAP10-4P60372 401 aaPredicted RBP5.69□□□□□ -1.5
HNRNPU-224ENST00000640056 MIR22HGQ0VDD5 57 aa5.68□□□□□ -1.5
HNRNPU-224ENST00000640056 PRAC1Q96KF2 57 aa5.67□□□□□ -1.5
HNRNPU-224ENST00000640056 KRTAP13-2Q52LG2 175 aa5.65□□□□□ -1.5
HNRNPU-224ENST00000640056 ADM2Q7Z4H4 148 aa5.65□□□□□ -1.51
HNRNPU-224ENST00000640056 IGKV2D-30A0A075B6S6 120 aa5.64□□□□□ -1.51
HNRNPU-224ENST00000640056 LINC01554Q52M75 96 aa5.58□□□□□ -1.52
HNRNPU-224ENST00000640056 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
HNRNPU-224ENST00000640056 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
HNRNPU-224ENST00000640056 FSIP2Q5CZC0 6907 aa5.54□□□□□ -1.52
HNRNPU-224ENST00000640056 FAT3Q8TDW7 4589 aa5.53□□□□□ -1.52
HNRNPU-224ENST00000640056 SPINK1P00995 79 aa5.52□□□□□ -1.53
HNRNPU-224ENST00000640056 MT1HL1P0DM35 61 aa5.52□□□□□ -1.53
HNRNPU-224ENST00000640056 LRP1Q07954 4544 aaKnown RBP5.52□□□□□ -1.53
HNRNPU-224ENST00000640056 PKHD1L1Q86WI1 4243 aa5.52□□□□□ -1.53
HNRNPU-224ENST00000640056 LCE2BO14633 110 aa5.5□□□□□ -1.53
HNRNPU-224ENST00000640056 CSAG1Q6PB30 78 aa5.5□□□□□ -1.53
HNRNPU-224ENST00000640056 TYMSOSQ8TAI1 123 aa5.5□□□□□ -1.53
HNRNPU-224ENST00000640056 LRP2P98164 4655 aa5.48□□□□□ -1.53
HNRNPU-224ENST00000640056 KRTAP10-8P60410 259 aa5.45□□□□□ -1.54
HNRNPU-224ENST00000640056 RPS29P62273 56 aaKnown RBP5.45□□□□□ -1.54
HNRNPU-224ENST00000640056 H0YAA0 97 aa5.43□□□□□ -1.54
HNRNPU-224ENST00000640056 A8MUU9 505 aa5.43□□□□□ -1.54
HNRNPU-224ENST00000640056 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
HNRNPU-224ENST00000640056 A0A1B0GU33 70 aa5.41□□□□□ -1.54
HNRNPU-224ENST00000640056 KRTAP3-1Q9BYR8 98 aa5.39□□□□□ -1.55
HNRNPU-224ENST00000640056 C20orf166-AS1Q96NR2 134 aa5.38□□□□□ -1.55
HNRNPU-224ENST00000640056 TNXBP22105 4242 aa5.38□□□□□ -1.55
HNRNPU-224ENST00000640056 H1FX-AS1Q4G0G2 97 aa5.37□□□□□ -1.55
HNRNPU-224ENST00000640056 LCE2AQ5TA79 106 aaPredicted RBP5.37□□□□□ -1.55
HNRNPU-224ENST00000640056 KRTAP25-1Q3LHN0 102 aa5.35□□□□□ -1.55
HNRNPU-224ENST00000640056 C9orf92A6NGG3 77 aa5.34□□□□□ -1.55
HNRNPU-224ENST00000640056 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.33□□□□□ -1.56
HNRNPU-224ENST00000640056 K7ERS5 55 aa5.29□□□□□ -1.56
HNRNPU-224ENST00000640056 H3BS24 57 aa5.28□□□□□ -1.56
HNRNPU-224ENST00000640056 COX6B2Q6YFQ2 88 aa5.28□□□□□ -1.56
HNRNPU-224ENST00000640056 ROMO1P60602 79 aa5.24□□□□□ -1.57
HNRNPU-224ENST00000640056 CRIPTQ9P021 101 aa5.18□□□□□ -1.58
HNRNPU-224ENST00000640056 KRTAP10-6P60371 365 aaPredicted RBP5.17□□□□□ -1.58
HNRNPU-224ENST00000640056 RPL37P61927 97 aaKnown RBP5.17□□□□□ -1.58
HNRNPU-224ENST00000640056 TPRXLQ17RH7 258 aa5.13□□□□□ -1.59
HNRNPU-224ENST00000640056 LCE2CQ5TA81 110 aa5.13□□□□□ -1.59
HNRNPU-224ENST00000640056 LPAP08519 4548 aa5.12□□□□□ -1.59
HNRNPU-224ENST00000640056 KRTAP13-4Q3LI77 160 aa5.11□□□□□ -1.59
HNRNPU-224ENST00000640056 A0A0D9SG42 100 aa5.09□□□□□ -1.6
HNRNPU-224ENST00000640056 P0C880 135 aa5.07□□□□□ -1.6
HNRNPU-224ENST00000640056 SSPOA2VEC9 5147 aa5.07□□□□□ -1.6
HNRNPU-224ENST00000640056 S4R3F8 94 aa5.07□□□□□ -1.6
HNRNPU-224ENST00000640056 LORP23490 312 aaPredicted RBP5.02□□□□□ -1.61
HNRNPU-224ENST00000640056 SPINT4Q6UDR6 99 aa5.01□□□□□ -1.61
HNRNPU-224ENST00000640056 XP32Q5T750 250 aa5□□□□□ -1.61
HNRNPU-224ENST00000640056 MUC17Q685J3 4493 aa4.99□□□□□ -1.61
HNRNPU-224ENST00000640056 C10orf95Q9H7T3 257 aa4.98□□□□□ -1.61
HNRNPU-224ENST00000640056 KRTAP12-2P59991 146 aa4.97□□□□□ -1.61
HNRNPU-224ENST00000640056 SEC61BP60468 96 aaKnown RBP4.97□□□□□ -1.61
HNRNPU-224ENST00000640056 KRTAP12-1P59990 96 aa4.94□□□□□ -1.62
HNRNPU-224ENST00000640056 NEBP20929 6669 aa4.93□□□□□ -1.62
HNRNPU-224ENST00000640056 KRTAP15-1Q3LI76 137 aa4.92□□□□□ -1.62
HNRNPU-224ENST00000640056 SYNE2Q8WXH0 6885 aaKnown RBP4.91□□□□□ -1.62
HNRNPU-224ENST00000640056 M0QZ58 72 aa4.9□□□□□ -1.63
HNRNPU-224ENST00000640056 NDUFAF8A1L188 74 aa4.84□□□□□ -1.63
HNRNPU-224ENST00000640056 KRTAP4-1Q9BYQ7 146 aa4.82□□□□□ -1.64
HNRNPU-224ENST00000640056 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
HNRNPU-224ENST00000640056 GPR98Q8WXG9 6306 aa4.78□□□□□ -1.64
HNRNPU-224ENST00000640056 MACF1Q9UPN3 7388 aaKnown RBP4.76□□□□□ -1.65
HNRNPU-224ENST00000640056 FCGBPQ9Y6R7 5405 aaPredicted RBP4.74□□□□□ -1.65
HNRNPU-224ENST00000640056 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
HNRNPU-224ENST00000640056 R4GN34 69 aa4.72□□□□□ -1.65
HNRNPU-224ENST00000640056 USH2AO75445 5202 aa4.71□□□□□ -1.66
HNRNPU-224ENST00000640056 MT1HP80294 61 aa4.7□□□□□ -1.66
HNRNPU-224ENST00000640056 KRTAP6-3Q3LI67 103 aa4.7□□□□□ -1.66
HNRNPU-224ENST00000640056 PLAC4Q8WY50 150 aa4.64□□□□□ -1.67
HNRNPU-224ENST00000640056 M0R2T5 61 aa4.62□□□□□ -1.67
HNRNPU-224ENST00000640056 LOC100996750A0A140TA64 210 aa4.6□□□□□ -1.67
HNRNPU-224ENST00000640056 KRTAP4-6Q9BYQ5 205 aa4.6□□□□□ -1.67
HNRNPU-224ENST00000640056 PP632Q6XCG6 107 aa4.55□□□□□ -1.68
HNRNPU-224ENST00000640056 FLGP20930 4061 aaPredicted RBP4.51□□□□□ -1.69
HNRNPU-224ENST00000640056 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
HNRNPU-224ENST00000640056 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
HNRNPU-224ENST00000640056 LUZP6Q538Z0 58 aa4.46□□□□□ -1.69
HNRNPU-224ENST00000640056 KRTAP2-3P0C7H8 128 aa4.44□□□□□ -1.7
HNRNPU-224ENST00000640056 KRTAP9-8Q9BYQ0 159 aa4.44□□□□□ -1.7
HNRNPU-224ENST00000640056 KRTAP2-4Q9BYR9 128 aa4.44□□□□□ -1.7
HNRNPU-224ENST00000640056 KRTAP23-1A1A580 65 aa4.38□□□□□ -1.71
HNRNPU-224ENST00000640056 MT2AP02795 61 aa4.37□□□□□ -1.71
HNRNPU-224ENST00000640056 KMT2DO14686 5537 aa4.37□□□□□ -1.71
HNRNPU-224ENST00000640056 TNP1P09430 55 aa4.36□□□□□ -1.71
HNRNPU-224ENST00000640056 MUC12Q9UKN1 5478 aa4.36□□□□□ -1.71
HNRNPU-224ENST00000640056 A0A0A0MQY5 61 aa4.35□□□□□ -1.71
HNRNPU-224ENST00000640056 MT1FP04733 61 aa4.32□□□□□ -1.72
HNRNPU-224ENST00000640056 KRTAP10-10P60014 251 aa4.32□□□□□ -1.72
HNRNPU-224ENST00000640056 KRTAP9-3Q9BYQ3 159 aa4.31□□□□□ -1.72
HNRNPU-224ENST00000640056 SPRR5A0A1B0GTR4 108 aa4.3□□□□□ -1.72
HNRNPU-224ENST00000640056 KRTAP4-8Q9BYQ9 185 aa4.26□□□□□ -1.73
HNRNPU-224ENST00000640056 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
HNRNPU-224ENST00000640056 KRTAP2-1Q9BYU5 128 aa4.23□□□□□ -1.73
HNRNPU-224ENST00000640056 KRTAP19-6Q3LI70 58 aa4.19□□□□□ -1.74
HNRNPU-224ENST00000640056 MDN1Q9NU22 5596 aa4.18□□□□□ -1.74
HNRNPU-224ENST00000640056 SPRR2GQ9BYE4 73 aa4.17□□□□□ -1.74
HNRNPU-224ENST00000640056 KRTAP4-12Q9BQ66 201 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms