RNA–Protein interactions for RNA: ENST00000638603.1

SCARB2-211, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,284 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-211ENST00000638603 KRTAP3-1Q9BYR8 98 aa4.37□□□□□ -1.71
SCARB2-211ENST00000638603 COX6B2Q6YFQ2 88 aa4.36□□□□□ -1.71
SCARB2-211ENST00000638603 CRIPTQ9P021 101 aa4.35□□□□□ -1.71
SCARB2-211ENST00000638603 HSPG2P98160 4391 aa4.35□□□□□ -1.71
SCARB2-211ENST00000638603 RYR1P21817 5038 aa4.34□□□□□ -1.71
SCARB2-211ENST00000638603 KRTAP3-3Q9BYR6 98 aa4.34□□□□□ -1.72
SCARB2-211ENST00000638603 KRTAP3-2Q9BYR7 98 aa4.34□□□□□ -1.72
SCARB2-211ENST00000638603 A0A0D9SG42 100 aa4.33□□□□□ -1.72
SCARB2-211ENST00000638603 ABCA13Q86UQ4 5058 aa4.29□□□□□ -1.72
SCARB2-211ENST00000638603 A0A1B0GVY2 172 aa4.28□□□□□ -1.72
SCARB2-211ENST00000638603 KRTAP25-1Q3LHN0 102 aa4.28□□□□□ -1.72
SCARB2-211ENST00000638603 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
SCARB2-211ENST00000638603 Q5VSD8 79 aa4.25□□□□□ -1.73
SCARB2-211ENST00000638603 S4R3F8 94 aa4.25□□□□□ -1.73
SCARB2-211ENST00000638603 MUC2Q02817 5179 aa4.24□□□□□ -1.73
SCARB2-211ENST00000638603 RPL37P61927 97 aaKnown RBP4.24□□□□□ -1.73
SCARB2-211ENST00000638603 LPAP08519 4548 aa4.24□□□□□ -1.73
SCARB2-211ENST00000638603 PKHD1L1Q86WI1 4243 aa4.23□□□□□ -1.73
SCARB2-211ENST00000638603 KRTAP17-1Q9BYP8 105 aa4.23□□□□□ -1.73
SCARB2-211ENST00000638603 SEC61BP60468 96 aaKnown RBP4.23□□□□□ -1.73
SCARB2-211ENST00000638603 ROMO1P60602 79 aa4.22□□□□□ -1.73
SCARB2-211ENST00000638603 XP32Q5T750 250 aa4.2□□□□□ -1.74
SCARB2-211ENST00000638603 KRTAP10-8P60410 259 aa4.19□□□□□ -1.74
SCARB2-211ENST00000638603 SPINT4Q6UDR6 99 aa4.18□□□□□ -1.74
SCARB2-211ENST00000638603 HERC1Q15751 4861 aa4.18□□□□□ -1.74
SCARB2-211ENST00000638603 KRTAP10-6P60371 365 aaPredicted RBP4.17□□□□□ -1.74
SCARB2-211ENST00000638603 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
SCARB2-211ENST00000638603 P0C880 135 aa4.16□□□□□ -1.74
SCARB2-211ENST00000638603 PCLOQ9Y6V0 5065 aa4.16□□□□□ -1.74
SCARB2-211ENST00000638603 LRP2P98164 4655 aa4.12□□□□□ -1.75
SCARB2-211ENST00000638603 C10orf95Q9H7T3 257 aa4.12□□□□□ -1.75
SCARB2-211ENST00000638603 RNF213Q63HN8 5207 aa4.1□□□□□ -1.75
SCARB2-211ENST00000638603 HERC2O95714 4834 aa4.07□□□□□ -1.76
SCARB2-211ENST00000638603 KRTAP12-2P59991 146 aa4.07□□□□□ -1.76
SCARB2-211ENST00000638603 TPRXLQ17RH7 258 aa4.06□□□□□ -1.76
SCARB2-211ENST00000638603 TNXBP22105 4242 aa4.06□□□□□ -1.76
SCARB2-211ENST00000638603 M0QZ58 72 aa4.02□□□□□ -1.77
SCARB2-211ENST00000638603 MT1HL1P0DM35 61 aa4.02□□□□□ -1.77
SCARB2-211ENST00000638603 KRTAP12-1P59990 96 aa4.01□□□□□ -1.77
SCARB2-211ENST00000638603 R4GN34 69 aa4.01□□□□□ -1.77
SCARB2-211ENST00000638603 FAT4Q6V0I7 4981 aa4□□□□□ -1.77
SCARB2-211ENST00000638603 UBR4Q5T4S7 5183 aa3.98□□□□□ -1.77
SCARB2-211ENST00000638603 LCE2DQ5TA82 110 aaPredicted RBP3.98□□□□□ -1.77
SCARB2-211ENST00000638603 KRTAP4-5Q9BYR2 181 aa3.98□□□□□ -1.77
SCARB2-211ENST00000638603 KRTAP23-1A1A580 65 aa3.94□□□□□ -1.78
SCARB2-211ENST00000638603 NDUFAF8A1L188 74 aa3.93□□□□□ -1.78
SCARB2-211ENST00000638603 CAMK2N1Q7Z7J9 78 aa3.87□□□□□ -1.79
SCARB2-211ENST00000638603 BIRC6Q9NR09 4857 aa3.85□□□□□ -1.79
SCARB2-211ENST00000638603 KRTAP15-1Q3LI76 137 aa3.85□□□□□ -1.79
SCARB2-211ENST00000638603 LORP23490 312 aaPredicted RBP3.83□□□□□ -1.8
SCARB2-211ENST00000638603 HMCN2Q8NDA2 5059 aa3.79□□□□□ -1.8
SCARB2-211ENST00000638603 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
SCARB2-211ENST00000638603 PLAC4Q8WY50 150 aa3.77□□□□□ -1.81
SCARB2-211ENST00000638603 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
SCARB2-211ENST00000638603 PP632Q6XCG6 107 aa3.67□□□□□ -1.82
SCARB2-211ENST00000638603 MUC17Q685J3 4493 aa3.66□□□□□ -1.82
SCARB2-211ENST00000638603 TNP1P09430 55 aa3.65□□□□□ -1.83
SCARB2-211ENST00000638603 M0R2T5 61 aa3.64□□□□□ -1.83
SCARB2-211ENST00000638603 USH2AO75445 5202 aa3.63□□□□□ -1.83
SCARB2-211ENST00000638603 FSIP2Q5CZC0 6907 aa3.6□□□□□ -1.83
SCARB2-211ENST00000638603 KRTAP19-2Q3LHN2 52 aa3.59□□□□□ -1.84
SCARB2-211ENST00000638603 LCE2CQ5TA81 110 aa3.59□□□□□ -1.84
SCARB2-211ENST00000638603 LCE2BO14633 110 aa3.57□□□□□ -1.84
SCARB2-211ENST00000638603 FLGP20930 4061 aaPredicted RBP3.55□□□□□ -1.84
SCARB2-211ENST00000638603 KRTAP10-10P60014 251 aa3.48□□□□□ -1.85
SCARB2-211ENST00000638603 LCE2AQ5TA79 106 aaPredicted RBP3.47□□□□□ -1.85
SCARB2-211ENST00000638603 SPRR2GQ9BYE4 73 aa3.41□□□□□ -1.86
SCARB2-211ENST00000638603 KRTAP19-1Q8IUB9 90 aa3.4□□□□□ -1.87
SCARB2-211ENST00000638603 LCE3AQ5TA76 89 aa3.4□□□□□ -1.87
SCARB2-211ENST00000638603 KMT2DO14686 5537 aa3.39□□□□□ -1.87
SCARB2-211ENST00000638603 MT1HP80294 61 aa3.37□□□□□ -1.87
SCARB2-211ENST00000638603 MT1FP04733 61 aa3.35□□□□□ -1.87
SCARB2-211ENST00000638603 MT2AP02795 61 aa3.34□□□□□ -1.87
SCARB2-211ENST00000638603 SPRR5A0A1B0GTR4 108 aa3.31□□□□□ -1.88
SCARB2-211ENST00000638603 KRTAP9-8Q9BYQ0 159 aa3.26□□□□□ -1.89
SCARB2-211ENST00000638603 KRTAP10-12P60413 245 aa3.26□□□□□ -1.89
SCARB2-211ENST00000638603 KRTAP12-3P60328 96 aa3.24□□□□□ -1.89
SCARB2-211ENST00000638603 KRTAP8-1Q8IUC2 63 aa3.23□□□□□ -1.89
SCARB2-211ENST00000638603 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
SCARB2-211ENST00000638603 MT1BP07438 61 aa3.22□□□□□ -1.89
SCARB2-211ENST00000638603 MT1XP80297 61 aa3.22□□□□□ -1.89
SCARB2-211ENST00000638603 KRTAP10-5P60370 271 aa3.21□□□□□ -1.9
SCARB2-211ENST00000638603 PRO2289Q9P1D8 64 aa3.2□□□□□ -1.9
SCARB2-211ENST00000638603 KRTAP10-7P60409 375 aaPredicted RBP3.17□□□□□ -1.9
SCARB2-211ENST00000638603 KRTAP19-4Q3LI73 84 aa3.17□□□□□ -1.9
SCARB2-211ENST00000638603 SSPOA2VEC9 5147 aa3.13□□□□□ -1.91
SCARB2-211ENST00000638603 KRTAP9-3Q9BYQ3 159 aa3.12□□□□□ -1.91
SCARB2-211ENST00000638603 KRTAP19-5Q3LI72 72 aa3.07□□□□□ -1.92
SCARB2-211ENST00000638603 INE1O15225 51 aa3.07□□□□□ -1.92
SCARB2-211ENST00000638603 DSTQ03001 7570 aaKnown RBP3.05□□□□□ -1.92
SCARB2-211ENST00000638603 MUC12Q9UKN1 5478 aa3.03□□□□□ -1.92
SCARB2-211ENST00000638603 LCE3CQ5T5A8 94 aa3.01□□□□□ -1.93
SCARB2-211ENST00000638603 KRTAP4-8A0A0G2JLE6 195 aa3.01□□□□□ -1.93
SCARB2-211ENST00000638603 KRTAP4-8Q9BYQ9 185 aa3.01□□□□□ -1.93
SCARB2-211ENST00000638603 FCGBPQ9Y6R7 5405 aaPredicted RBP3□□□□□ -1.93
SCARB2-211ENST00000638603 KRTAP9-2Q9BYQ4 174 aa2.93□□□□□ -1.94
SCARB2-211ENST00000638603 KRTAP4-7Q9BYR0 210 aa2.91□□□□□ -1.94
SCARB2-211ENST00000638603 SYNE2Q8WXH0 6885 aaKnown RBP2.91□□□□□ -1.94
SCARB2-211ENST00000638603 KRTAP9-6A0A140TA67 174 aa2.9□□□□□ -1.95
SCARB2-211ENST00000638603 OBSCNQ5VST9 7968 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms