RNA–Protein interactions for RNA: ENST00000638409.1

SCARB2-209, Transcript of scavenger receptor class B member 2, humanhuman

Gene SCARB2, Length 2,753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-209ENST00000638409 KRTAP1-4P0C5Y4 121 aa4.26□□□□□ -1.73
SCARB2-209ENST00000638409 PRLHP81277 87 aa4.26□□□□□ -1.73
SCARB2-209ENST00000638409 PRR15LQ9BU68 103 aa4.26□□□□□ -1.73
SCARB2-209ENST00000638409 SPRR4Q96PI1 79 aa4.25□□□□□ -1.73
SCARB2-209ENST00000638409 MT1HL1P0DM35 61 aa4.25□□□□□ -1.73
SCARB2-209ENST00000638409 KRTAP10-8P60410 259 aa4.25□□□□□ -1.73
SCARB2-209ENST00000638409 WFDC13Q8IUB5 93 aa4.25□□□□□ -1.73
SCARB2-209ENST00000638409 TNXBP22105 4242 aa4.25□□□□□ -1.73
SCARB2-209ENST00000638409 LIMD2Q9BT23 127 aa4.25□□□□□ -1.73
SCARB2-209ENST00000638409 FLG2Q5D862 2391 aaPredicted RBP4.24□□□□□ -1.73
SCARB2-209ENST00000638409 IGFL1Q6UW32 110 aa4.23□□□□□ -1.73
SCARB2-209ENST00000638409 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
SCARB2-209ENST00000638409 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
SCARB2-209ENST00000638409 A0A087WSZ3 146 aa4.21□□□□□ -1.73
SCARB2-209ENST00000638409 LOC100996750A0A140TA64 210 aa4.2□□□□□ -1.74
SCARB2-209ENST00000638409 KRTAP4-6Q9BYQ5 205 aa4.2□□□□□ -1.74
SCARB2-209ENST00000638409 PRO2289Q9P1D8 64 aa4.2□□□□□ -1.74
SCARB2-209ENST00000638409 LOC101927531A0A1B0GV80 90 aa4.19□□□□□ -1.74
SCARB2-209ENST00000638409 LINC00208Q96KT6 92 aa4.19□□□□□ -1.74
SCARB2-209ENST00000638409 SPRR1BP22528 89 aa4.19□□□□□ -1.74
SCARB2-209ENST00000638409 KRTAP13-2Q52LG2 175 aa4.18□□□□□ -1.74
SCARB2-209ENST00000638409 ANAPC11Q9NYG5 84 aa4.18□□□□□ -1.74
SCARB2-209ENST00000638409 NDUFB1O75438 58 aa4.18□□□□□ -1.74
SCARB2-209ENST00000638409 LCE1FQ5T754 118 aa4.18□□□□□ -1.74
SCARB2-209ENST00000638409 KRTAP4-12Q9BQ66 201 aa4.18□□□□□ -1.74
SCARB2-209ENST00000638409 DMBT1Q9UGM3 2413 aaPredicted RBP4.17□□□□□ -1.74
SCARB2-209ENST00000638409 H0Y9P7 68 aa4.17□□□□□ -1.74
SCARB2-209ENST00000638409 CSAG1Q6PB30 78 aa4.15□□□□□ -1.74
SCARB2-209ENST00000638409 HERC1Q15751 4861 aa4.14□□□□□ -1.75
SCARB2-209ENST00000638409 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
SCARB2-209ENST00000638409 SSBP3-AS1Q7Z2R9 100 aa4.14□□□□□ -1.75
SCARB2-209ENST00000638409 SPAG11AQ6PDA7 123 aa4.13□□□□□ -1.75
SCARB2-209ENST00000638409 SPINK7P58062 85 aa4.12□□□□□ -1.75
SCARB2-209ENST00000638409 LINC00304Q8N9R0 145 aa4.12□□□□□ -1.75
SCARB2-209ENST00000638409 LINC00472Q9H8W2 130 aa4.12□□□□□ -1.75
SCARB2-209ENST00000638409 COA5Q86WW8 74 aa4.11□□□□□ -1.75
SCARB2-209ENST00000638409 MMP24-AS1A0A0U1RRL7 71 aa4.11□□□□□ -1.75
SCARB2-209ENST00000638409 RPS29P62273 56 aaKnown RBP4.1□□□□□ -1.75
SCARB2-209ENST00000638409 LINC01558Q9Y6Z2 57 aa4.1□□□□□ -1.75
SCARB2-209ENST00000638409 PCOTHQ58A44 107 aa4.1□□□□□ -1.75
SCARB2-209ENST00000638409 SPINK1P00995 79 aa4.09□□□□□ -1.75
SCARB2-209ENST00000638409 Q96NJ1 140 aa4.06□□□□□ -1.76
SCARB2-209ENST00000638409 HMCN2Q8NDA2 5059 aa4.06□□□□□ -1.76
SCARB2-209ENST00000638409 MT3P25713 68 aa4.04□□□□□ -1.76
SCARB2-209ENST00000638409 TP53AIP1Q9HCN2 124 aa4□□□□□ -1.77
SCARB2-209ENST00000638409 MRPL34Q9BQ48 92 aaKnown RBP3.98□□□□□ -1.77
SCARB2-209ENST00000638409 LPAP08519 4548 aa3.97□□□□□ -1.77
SCARB2-209ENST00000638409 KRTAP13-3Q3SY46 172 aa3.95□□□□□ -1.78
SCARB2-209ENST00000638409 KRTAP2-2Q9BYT5 123 aa3.95□□□□□ -1.78
SCARB2-209ENST00000638409 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
SCARB2-209ENST00000638409 LRP2P98164 4655 aa3.94□□□□□ -1.78
SCARB2-209ENST00000638409 KRTAP9-2Q9BYQ4 174 aa3.93□□□□□ -1.78
SCARB2-209ENST00000638409 SPATA8Q6RVD6 105 aa3.92□□□□□ -1.78
SCARB2-209ENST00000638409 MUC17Q685J3 4493 aa3.9□□□□□ -1.79
SCARB2-209ENST00000638409 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.9□□□□□ -1.79
SCARB2-209ENST00000638409 LCE3CQ5T5A8 94 aa3.89□□□□□ -1.79
SCARB2-209ENST00000638409 DMAC1Q96GE9 116 aa3.89□□□□□ -1.79
SCARB2-209ENST00000638409 UBR4Q5T4S7 5183 aa3.89□□□□□ -1.79
SCARB2-209ENST00000638409 ACYP2P14621 99 aa3.87□□□□□ -1.79
SCARB2-209ENST00000638409 A0A1B0GU69 56 aa3.85□□□□□ -1.79
SCARB2-209ENST00000638409 C9orf92A6NGG3 77 aa3.85□□□□□ -1.79
SCARB2-209ENST00000638409 LCE3BQ5TA77 95 aa3.85□□□□□ -1.79
SCARB2-209ENST00000638409 UQCR11O14957 56 aa3.83□□□□□ -1.8
SCARB2-209ENST00000638409 RPL37P61927 97 aaKnown RBP3.82□□□□□ -1.8
SCARB2-209ENST00000638409 RNF213Q63HN8 5207 aa3.81□□□□□ -1.8
SCARB2-209ENST00000638409 KRTAP10-6P60371 365 aaPredicted RBP3.79□□□□□ -1.8
SCARB2-209ENST00000638409 MUC2Q02817 5179 aa3.77□□□□□ -1.81
SCARB2-209ENST00000638409 KRTAP4-1Q9BYQ7 146 aa3.77□□□□□ -1.81
SCARB2-209ENST00000638409 KRTAP10-12P60413 245 aa3.72□□□□□ -1.81
SCARB2-209ENST00000638409 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
SCARB2-209ENST00000638409 CRIPTQ9P021 101 aa3.69□□□□□ -1.82
SCARB2-209ENST00000638409 KRTAP19-2Q3LHN2 52 aa3.68□□□□□ -1.82
SCARB2-209ENST00000638409 FAT4Q6V0I7 4981 aa3.65□□□□□ -1.82
SCARB2-209ENST00000638409 H0YAA0 97 aa3.65□□□□□ -1.82
SCARB2-209ENST00000638409 INE1O15225 51 aa3.61□□□□□ -1.83
SCARB2-209ENST00000638409 LCE3EQ5T5B0 92 aa3.6□□□□□ -1.83
SCARB2-209ENST00000638409 MT1HP80294 61 aa3.59□□□□□ -1.83
SCARB2-209ENST00000638409 FLGP20930 4061 aaPredicted RBP3.59□□□□□ -1.84
SCARB2-209ENST00000638409 H1FX-AS1Q4G0G2 97 aa3.58□□□□□ -1.84
SCARB2-209ENST00000638409 LCE1DQ5T752 114 aa3.58□□□□□ -1.84
SCARB2-209ENST00000638409 COX6B2Q6YFQ2 88 aa3.58□□□□□ -1.84
SCARB2-209ENST00000638409 M0R2T5 61 aa3.5□□□□□ -1.85
SCARB2-209ENST00000638409 KRTAP13-4Q3LI77 160 aa3.49□□□□□ -1.85
SCARB2-209ENST00000638409 KRTAP4-8A0A0G2JLE6 195 aa3.48□□□□□ -1.85
SCARB2-209ENST00000638409 C10orf95Q9H7T3 257 aa3.48□□□□□ -1.85
SCARB2-209ENST00000638409 A0A0D9SG42 100 aa3.47□□□□□ -1.85
SCARB2-209ENST00000638409 SPRR5A0A1B0GTR4 108 aa3.46□□□□□ -1.86
SCARB2-209ENST00000638409 LCE1EQ5T753 118 aa3.44□□□□□ -1.86
SCARB2-209ENST00000638409 KRTAP4-11Q9BYQ6 195 aa3.4□□□□□ -1.86
SCARB2-209ENST00000638409 S4R3F8 94 aa3.4□□□□□ -1.87
SCARB2-209ENST00000638409 KRTAP4-7Q9BYR0 210 aa3.39□□□□□ -1.87
SCARB2-209ENST00000638409 MT2AP02795 61 aa3.39□□□□□ -1.87
SCARB2-209ENST00000638409 PP632Q6XCG6 107 aa3.38□□□□□ -1.87
SCARB2-209ENST00000638409 KRTAP12-2P59991 146 aa3.37□□□□□ -1.87
SCARB2-209ENST00000638409 MT1FP04733 61 aa3.36□□□□□ -1.87
SCARB2-209ENST00000638409 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
SCARB2-209ENST00000638409 KRTAP4-9Q9BYQ8 210 aa3.34□□□□□ -1.87
SCARB2-209ENST00000638409 KRTAP10-10P60014 251 aa3.33□□□□□ -1.88
SCARB2-209ENST00000638409 CRCT1Q9UGL9 99 aa3.29□□□□□ -1.88
SCARB2-209ENST00000638409 LCE3DQ9BYE3 92 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms