RNA–Protein interactions for RNA: ENST00000637881.1

CDKL5-211, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 5

Gene CDKL5, Length 1,782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-211ENST00000637881 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
CDKL5-211ENST00000637881 DNAH11Q96DT5 4516 aa4.43□□□□□ -1.7
CDKL5-211ENST00000637881 LUZP6Q538Z0 58 aa4.42□□□□□ -1.7
CDKL5-211ENST00000637881 PKHD1P08F94 4074 aa4.41□□□□□ -1.7
CDKL5-211ENST00000637881 A0A1B0GVY2 172 aa4.4□□□□□ -1.71
CDKL5-211ENST00000637881 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
CDKL5-211ENST00000637881 SPINK6Q6UWN8 80 aa4.38□□□□□ -1.71
CDKL5-211ENST00000637881 KRTAP10-1P60331 282 aa4.37□□□□□ -1.71
CDKL5-211ENST00000637881 SEC61BP60468 96 aaKnown RBP4.37□□□□□ -1.71
CDKL5-211ENST00000637881 DNAH5Q8TE73 4624 aa4.37□□□□□ -1.71
CDKL5-211ENST00000637881 CRIPTQ9P021 101 aa4.37□□□□□ -1.71
CDKL5-211ENST00000637881 KIAA1109Q2LD37 5005 aa4.36□□□□□ -1.71
CDKL5-211ENST00000637881 TPRXLQ17RH7 258 aa4.36□□□□□ -1.71
CDKL5-211ENST00000637881 COX6B2Q6YFQ2 88 aa4.36□□□□□ -1.71
CDKL5-211ENST00000637881 SPINK1P00995 79 aa4.35□□□□□ -1.71
CDKL5-211ENST00000637881 DYNC1H1Q14204 4646 aaKnown RBP4.33□□□□□ -1.72
CDKL5-211ENST00000637881 LRP1BQ9NZR2 4599 aa4.33□□□□□ -1.72
CDKL5-211ENST00000637881 TYMSOSQ8TAI1 123 aa4.33□□□□□ -1.72
CDKL5-211ENST00000637881 SMR3BP02814 79 aaPredicted RBP4.32□□□□□ -1.72
CDKL5-211ENST00000637881 RPL37P61927 97 aaKnown RBP4.31□□□□□ -1.72
CDKL5-211ENST00000637881 CIRBP-AS1Q8TBR5 109 aa4.31□□□□□ -1.72
CDKL5-211ENST00000637881 KRTAP9-9Q9BYP9 154 aa4.3□□□□□ -1.72
CDKL5-211ENST00000637881 KRTAP9-4Q9BYQ2 154 aa4.3□□□□□ -1.72
CDKL5-211ENST00000637881 SPACA4Q8TDM5 124 aa4.3□□□□□ -1.72
CDKL5-211ENST00000637881 DNAH8Q96JB1 4490 aa4.29□□□□□ -1.72
CDKL5-211ENST00000637881 SRRM2Q9UQ35 2752 aaKnown RBP4.28□□□□□ -1.72
CDKL5-211ENST00000637881 APOBP04114 4563 aaKnown RBP4.27□□□□□ -1.73
CDKL5-211ENST00000637881 Q8N1X5 172 aa4.27□□□□□ -1.73
CDKL5-211ENST00000637881 HSPG2P98160 4391 aa4.25□□□□□ -1.73
CDKL5-211ENST00000637881 KRTAP4-8A0A0G2JLE6 195 aa4.24□□□□□ -1.73
CDKL5-211ENST00000637881 FAT1Q14517 4588 aa4.23□□□□□ -1.73
CDKL5-211ENST00000637881 FLG2Q5D862 2391 aaPredicted RBP4.22□□□□□ -1.73
CDKL5-211ENST00000637881 VPS13BQ7Z7G8 4022 aa4.22□□□□□ -1.73
CDKL5-211ENST00000637881 Q5VSD8 79 aa4.2□□□□□ -1.74
CDKL5-211ENST00000637881 C10orf95Q9H7T3 257 aa4.19□□□□□ -1.74
CDKL5-211ENST00000637881 KRTAP4-5Q9BYR2 181 aa4.17□□□□□ -1.74
CDKL5-211ENST00000637881 KRTAP19-4Q3LI73 84 aa4.14□□□□□ -1.75
CDKL5-211ENST00000637881 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
CDKL5-211ENST00000637881 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
CDKL5-211ENST00000637881 KRTAP10-4P60372 401 aaPredicted RBP4.13□□□□□ -1.75
CDKL5-211ENST00000637881 HERC1Q15751 4861 aa4.11□□□□□ -1.75
CDKL5-211ENST00000637881 ABCA13Q86UQ4 5058 aa4.11□□□□□ -1.75
CDKL5-211ENST00000637881 CAMK2N1Q7Z7J9 78 aa4.11□□□□□ -1.75
CDKL5-211ENST00000637881 S4R3F8 94 aa4.11□□□□□ -1.75
CDKL5-211ENST00000637881 KRTAP10-6P60371 365 aaPredicted RBP4.09□□□□□ -1.75
CDKL5-211ENST00000637881 KRTAP4-7Q9BYR0 210 aa4.09□□□□□ -1.76
CDKL5-211ENST00000637881 MYCBP2O75592 4640 aa4.08□□□□□ -1.76
CDKL5-211ENST00000637881 KRTAP13-4Q3LI77 160 aa4.07□□□□□ -1.76
CDKL5-211ENST00000637881 KRTAP13-2Q52LG2 175 aa4.07□□□□□ -1.76
CDKL5-211ENST00000637881 PKHD1L1Q86WI1 4243 aa4.07□□□□□ -1.76
CDKL5-211ENST00000637881 LRP1Q07954 4544 aaKnown RBP4.07□□□□□ -1.76
CDKL5-211ENST00000637881 A0A0D9SG42 100 aa4.05□□□□□ -1.76
CDKL5-211ENST00000637881 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
CDKL5-211ENST00000637881 RPS29P62273 56 aaKnown RBP4.04□□□□□ -1.76
CDKL5-211ENST00000637881 KRTAP1-4P0C5Y4 121 aa4.04□□□□□ -1.76
CDKL5-211ENST00000637881 LCE4AQ5TA78 99 aa4.04□□□□□ -1.76
CDKL5-211ENST00000637881 FAT3Q8TDW7 4589 aa4.03□□□□□ -1.76
CDKL5-211ENST00000637881 KRTAP4-9Q9BYQ8 210 aa4.01□□□□□ -1.77
CDKL5-211ENST00000637881 KRTAP12-2P59991 146 aa4□□□□□ -1.77
CDKL5-211ENST00000637881 KRTAP12-1P59990 96 aa3.99□□□□□ -1.77
CDKL5-211ENST00000637881 TNXBP22105 4242 aa3.99□□□□□ -1.77
CDKL5-211ENST00000637881 MUC2Q02817 5179 aa3.98□□□□□ -1.77
CDKL5-211ENST00000637881 KRTAP10-8P60410 259 aa3.98□□□□□ -1.77
CDKL5-211ENST00000637881 DMBT1Q9UGM3 2413 aaPredicted RBP3.98□□□□□ -1.77
CDKL5-211ENST00000637881 MT1HL1P0DM35 61 aa3.97□□□□□ -1.77
CDKL5-211ENST00000637881 KRTAP9-7A8MTY7 169 aa3.97□□□□□ -1.77
CDKL5-211ENST00000637881 CRCT1Q9UGL9 99 aa3.97□□□□□ -1.77
CDKL5-211ENST00000637881 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
CDKL5-211ENST00000637881 M0QZ58 72 aa3.91□□□□□ -1.78
CDKL5-211ENST00000637881 KRTAP4-2Q9BYR5 136 aa3.9□□□□□ -1.79
CDKL5-211ENST00000637881 PP632Q6XCG6 107 aa3.89□□□□□ -1.79
CDKL5-211ENST00000637881 KRTAP4-11Q9BYQ6 195 aa3.87□□□□□ -1.79
CDKL5-211ENST00000637881 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
CDKL5-211ENST00000637881 KRTAP9-3Q9BYQ3 159 aa3.83□□□□□ -1.8
CDKL5-211ENST00000637881 C9orf92A6NGG3 77 aa3.81□□□□□ -1.8
CDKL5-211ENST00000637881 LPAP08519 4548 aa3.81□□□□□ -1.8
CDKL5-211ENST00000637881 INE1O15225 51 aa3.8□□□□□ -1.8
CDKL5-211ENST00000637881 FAT4Q6V0I7 4981 aa3.78□□□□□ -1.8
CDKL5-211ENST00000637881 SPRR5A0A1B0GTR4 108 aa3.78□□□□□ -1.8
CDKL5-211ENST00000637881 HMCN2Q8NDA2 5059 aa3.76□□□□□ -1.81
CDKL5-211ENST00000637881 LRP2P98164 4655 aa3.75□□□□□ -1.81
CDKL5-211ENST00000637881 RNF213Q63HN8 5207 aa3.74□□□□□ -1.81
CDKL5-211ENST00000637881 KRTAP23-1A1A580 65 aa3.71□□□□□ -1.81
CDKL5-211ENST00000637881 R4GN34 69 aa3.66□□□□□ -1.82
CDKL5-211ENST00000637881 FSIP2Q5CZC0 6907 aa3.64□□□□□ -1.83
CDKL5-211ENST00000637881 KRTAP5-3Q6L8H2 238 aa3.62□□□□□ -1.83
CDKL5-211ENST00000637881 MUC17Q685J3 4493 aa3.59□□□□□ -1.83
CDKL5-211ENST00000637881 KRTAP9-8Q9BYQ0 159 aa3.58□□□□□ -1.84
CDKL5-211ENST00000637881 KRTAP4-1Q9BYQ7 146 aa3.58□□□□□ -1.84
CDKL5-211ENST00000637881 TNP1P09430 55 aa3.48□□□□□ -1.85
CDKL5-211ENST00000637881 SSPOA2VEC9 5147 aa3.42□□□□□ -1.86
CDKL5-211ENST00000637881 M0R2T5 61 aa3.41□□□□□ -1.86
CDKL5-211ENST00000637881 KRTAP19-2Q3LHN2 52 aa3.41□□□□□ -1.86
CDKL5-211ENST00000637881 KRTAP20-1Q3LI63 56 aa3.41□□□□□ -1.86
CDKL5-211ENST00000637881 FLGP20930 4061 aaPredicted RBP3.38□□□□□ -1.87
CDKL5-211ENST00000637881 MT1HP80294 61 aa3.37□□□□□ -1.87
CDKL5-211ENST00000637881 NEBP20929 6669 aa3.34□□□□□ -1.88
CDKL5-211ENST00000637881 GPR98Q8WXG9 6306 aa3.33□□□□□ -1.88
CDKL5-211ENST00000637881 SYNE2Q8WXH0 6885 aaKnown RBP3.24□□□□□ -1.89
CDKL5-211ENST00000637881 KRTAP10-10P60014 251 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms