RNA–Protein interactions for RNA: ENST00000637806.1

SMARCA2-263, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2, humanhuman

TSL 5 BASIC

Gene SMARCA2, Length 7,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA2-263ENST00000637806 LYSTQ99698 3801 aa4.38□□□□□ -1.71
SMARCA2-263ENST00000637806 PLECQ15149 4684 aaKnown RBP4.38□□□□□ -1.71
SMARCA2-263ENST00000637806 KRTAP8-1Q8IUC2 63 aa4.38□□□□□ -1.71
SMARCA2-263ENST00000637806 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
SMARCA2-263ENST00000637806 KRTAP10-6P60371 365 aaPredicted RBP4.35□□□□□ -1.71
SMARCA2-263ENST00000637806 DNAH11Q96DT5 4516 aa4.35□□□□□ -1.71
SMARCA2-263ENST00000637806 VPS13BQ7Z7G8 4022 aa4.35□□□□□ -1.71
SMARCA2-263ENST00000637806 MT1HP80294 61 aa4.34□□□□□ -1.71
SMARCA2-263ENST00000637806 FAT2Q9NYQ8 4349 aa4.33□□□□□ -1.72
SMARCA2-263ENST00000637806 RYR1P21817 5038 aa4.32□□□□□ -1.72
SMARCA2-263ENST00000637806 STARD9Q9P2P6 4700 aa4.29□□□□□ -1.72
SMARCA2-263ENST00000637806 LRP1BQ9NZR2 4599 aa4.29□□□□□ -1.72
SMARCA2-263ENST00000637806 KRTAP9-2Q9BYQ4 174 aa4.26□□□□□ -1.73
SMARCA2-263ENST00000637806 SPRR2FQ96RM1 72 aa4.26□□□□□ -1.73
SMARCA2-263ENST00000637806 FAT1Q14517 4588 aa4.25□□□□□ -1.73
SMARCA2-263ENST00000637806 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
SMARCA2-263ENST00000637806 CMYA5Q8N3K9 4069 aa4.24□□□□□ -1.73
SMARCA2-263ENST00000637806 RYR3Q15413 4870 aa4.22□□□□□ -1.73
SMARCA2-263ENST00000637806 DNAH10Q8IVF4 4471 aa4.2□□□□□ -1.74
SMARCA2-263ENST00000637806 DYNC1H1Q14204 4646 aaKnown RBP4.19□□□□□ -1.74
SMARCA2-263ENST00000637806 KRTAP9-6A0A140TA67 174 aa4.19□□□□□ -1.74
SMARCA2-263ENST00000637806 KRTAP10-12P60413 245 aa4.19□□□□□ -1.74
SMARCA2-263ENST00000637806 KRTAP13-4Q3LI77 160 aa4.19□□□□□ -1.74
SMARCA2-263ENST00000637806 VPS13DQ5THJ4 4388 aa4.18□□□□□ -1.74
SMARCA2-263ENST00000637806 DNAH6Q9C0G6 4158 aa4.15□□□□□ -1.74
SMARCA2-263ENST00000637806 DYNC2H1Q8NCM8 4307 aaKnown RBP4.15□□□□□ -1.75
SMARCA2-263ENST00000637806 SPRR2EP22531 72 aa4.14□□□□□ -1.75
SMARCA2-263ENST00000637806 SPRR2BP35325 72 aa4.14□□□□□ -1.75
SMARCA2-263ENST00000637806 SPRR2AP35326 72 aa4.14□□□□□ -1.75
SMARCA2-263ENST00000637806 KRTAP3-1Q9BYR8 98 aa4.14□□□□□ -1.75
SMARCA2-263ENST00000637806 DNAH17Q9UFH2 4485 aa4.13□□□□□ -1.75
SMARCA2-263ENST00000637806 SACSQ9NZJ4 4579 aa4.13□□□□□ -1.75
SMARCA2-263ENST00000637806 KRTAP12-1P59990 96 aa4.12□□□□□ -1.75
SMARCA2-263ENST00000637806 BIRC6Q9NR09 4857 aa4.12□□□□□ -1.75
SMARCA2-263ENST00000637806 MT2AP02795 61 aa4.11□□□□□ -1.75
SMARCA2-263ENST00000637806 DNAH3Q8TD57 4116 aa4.09□□□□□ -1.76
SMARCA2-263ENST00000637806 INE1O15225 51 aa4.07□□□□□ -1.76
SMARCA2-263ENST00000637806 FAT3Q8TDW7 4589 aa4.07□□□□□ -1.76
SMARCA2-263ENST00000637806 HERC2O95714 4834 aa4.06□□□□□ -1.76
SMARCA2-263ENST00000637806 KIAA1109Q2LD37 5005 aa4.05□□□□□ -1.76
SMARCA2-263ENST00000637806 DNAH2Q9P225 4427 aa4.04□□□□□ -1.76
SMARCA2-263ENST00000637806 MT1FP04733 61 aa4.03□□□□□ -1.76
SMARCA2-263ENST00000637806 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
SMARCA2-263ENST00000637806 HSPG2P98160 4391 aa4.03□□□□□ -1.76
SMARCA2-263ENST00000637806 PKHD1P08F94 4074 aa4□□□□□ -1.77
SMARCA2-263ENST00000637806 SPRR2DP22532 72 aa4□□□□□ -1.77
SMARCA2-263ENST00000637806 DNAH7Q8WXX0 4024 aa3.99□□□□□ -1.77
SMARCA2-263ENST00000637806 FRAS1Q86XX4 4008 aa3.98□□□□□ -1.77
SMARCA2-263ENST00000637806 KRTAP10-7P60409 375 aaPredicted RBP3.97□□□□□ -1.77
SMARCA2-263ENST00000637806 KRTAP19-1Q8IUB9 90 aa3.97□□□□□ -1.77
SMARCA2-263ENST00000637806 PKHD1L1Q86WI1 4243 aa3.95□□□□□ -1.78
SMARCA2-263ENST00000637806 APOBP04114 4563 aaKnown RBP3.95□□□□□ -1.78
SMARCA2-263ENST00000637806 DNAH8Q96JB1 4490 aa3.94□□□□□ -1.78
SMARCA2-263ENST00000637806 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
SMARCA2-263ENST00000637806 KMT2CQ8NEZ4 4911 aaKnown RBP3.92□□□□□ -1.78
SMARCA2-263ENST00000637806 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
SMARCA2-263ENST00000637806 KRTAP3-3Q9BYR6 98 aa3.88□□□□□ -1.79
SMARCA2-263ENST00000637806 KRTAP9-7A8MTY7 169 aa3.88□□□□□ -1.79
SMARCA2-263ENST00000637806 PCLOQ9Y6V0 5065 aa3.87□□□□□ -1.79
SMARCA2-263ENST00000637806 MYCBP2O75592 4640 aa3.87□□□□□ -1.79
SMARCA2-263ENST00000637806 HECTD4Q9Y4D8 3996 aa3.87□□□□□ -1.79
SMARCA2-263ENST00000637806 RYR2Q92736 4967 aa3.86□□□□□ -1.79
SMARCA2-263ENST00000637806 LCE2BO14633 110 aa3.86□□□□□ -1.79
SMARCA2-263ENST00000637806 LRP2P98164 4655 aa3.84□□□□□ -1.8
SMARCA2-263ENST00000637806 FSIP2Q5CZC0 6907 aa3.84□□□□□ -1.8
SMARCA2-263ENST00000637806 LCE3AQ5TA76 89 aa3.83□□□□□ -1.8
SMARCA2-263ENST00000637806 HYDINQ4G0P3 5121 aa3.82□□□□□ -1.8
SMARCA2-263ENST00000637806 SPRR5A0A1B0GTR4 108 aa3.81□□□□□ -1.8
SMARCA2-263ENST00000637806 LPAP08519 4548 aa3.8□□□□□ -1.8
SMARCA2-263ENST00000637806 SPRR2GQ9BYE4 73 aa3.76□□□□□ -1.81
SMARCA2-263ENST00000637806 KRTAP3-2Q9BYR7 98 aa3.75□□□□□ -1.81
SMARCA2-263ENST00000637806 KRTAP20-1Q3LI63 56 aa3.75□□□□□ -1.81
SMARCA2-263ENST00000637806 LCE2DQ5TA82 110 aaPredicted RBP3.74□□□□□ -1.81
SMARCA2-263ENST00000637806 EPPK1P58107 5090 aaKnown RBP3.73□□□□□ -1.81
SMARCA2-263ENST00000637806 PKD1P98161 4303 aa3.72□□□□□ -1.81
SMARCA2-263ENST00000637806 KRTAP10-5P60370 271 aa3.72□□□□□ -1.81
SMARCA2-263ENST00000637806 KRTAP9-8Q9BYQ0 159 aa3.71□□□□□ -1.82
SMARCA2-263ENST00000637806 HERC1Q15751 4861 aa3.68□□□□□ -1.82
SMARCA2-263ENST00000637806 LCE2CQ5TA81 110 aa3.67□□□□□ -1.82
SMARCA2-263ENST00000637806 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
SMARCA2-263ENST00000637806 KRTAP9-3Q9BYQ3 159 aa3.63□□□□□ -1.83
SMARCA2-263ENST00000637806 MT4P47944 62 aa3.62□□□□□ -1.83
SMARCA2-263ENST00000637806 KRTAP12-4P60329 112 aa3.62□□□□□ -1.83
SMARCA2-263ENST00000637806 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.61□□□□□ -1.83
SMARCA2-263ENST00000637806 LCE3BQ5TA77 95 aa3.6□□□□□ -1.83
SMARCA2-263ENST00000637806 LCE2AQ5TA79 106 aaPredicted RBP3.6□□□□□ -1.83
SMARCA2-263ENST00000637806 UBR4Q5T4S7 5183 aa3.55□□□□□ -1.84
SMARCA2-263ENST00000637806 KRTAP4-8A0A0G2JLE6 195 aa3.54□□□□□ -1.84
SMARCA2-263ENST00000637806 KRTAP4-8Q9BYQ9 185 aa3.54□□□□□ -1.84
SMARCA2-263ENST00000637806 KRTAP19-8Q3LI54 63 aa3.52□□□□□ -1.85
SMARCA2-263ENST00000637806 SYNE2Q8WXH0 6885 aaKnown RBP3.5□□□□□ -1.85
SMARCA2-263ENST00000637806 TNXBP22105 4242 aa3.5□□□□□ -1.85
SMARCA2-263ENST00000637806 MT1BP07438 61 aa3.49□□□□□ -1.85
SMARCA2-263ENST00000637806 KRTAP19-6Q3LI70 58 aa3.48□□□□□ -1.85
SMARCA2-263ENST00000637806 ABCA13Q86UQ4 5058 aa3.48□□□□□ -1.85
SMARCA2-263ENST00000637806 KRTAP2-3P0C7H8 128 aa3.46□□□□□ -1.86
SMARCA2-263ENST00000637806 KRTAP2-4Q9BYR9 128 aa3.46□□□□□ -1.86
SMARCA2-263ENST00000637806 MT1XP80297 61 aa3.43□□□□□ -1.86
SMARCA2-263ENST00000637806 KRTAP6-3Q3LI67 103 aa3.43□□□□□ -1.86
SMARCA2-263ENST00000637806 MT1GP13640 62 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms