RNA–Protein interactions for RNA: ENST00000637625.1

CACNA1A-244, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

Gene CACNA1A, Length 1,890 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-244ENST00000637625 TRAV22A0A0B4J277 110 aa6.96□□□□□ -1.29
CACNA1A-244ENST00000637625 ABCA13Q86UQ4 5058 aa6.96□□□□□ -1.3
CACNA1A-244ENST00000637625 H7BZZ5 65 aa6.96□□□□□ -1.3
CACNA1A-244ENST00000637625 MT1HL1P0DM35 61 aa6.95□□□□□ -1.3
CACNA1A-244ENST00000637625 TP53AIP1Q9HCN2 124 aa6.95□□□□□ -1.3
CACNA1A-244ENST00000637625 PMAIP1Q13794 54 aa6.94□□□□□ -1.3
CACNA1A-244ENST00000637625 ZCCHC13Q8WW36 166 aaKnown RBP6.93□□□□□ -1.3
CACNA1A-244ENST00000637625 PCLOQ9Y6V0 5065 aa6.93□□□□□ -1.3
CACNA1A-244ENST00000637625 Q5W150 140 aa6.92□□□□□ -1.3
CACNA1A-244ENST00000637625 C1orf64Q8NEQ6 169 aa6.92□□□□□ -1.3
CACNA1A-244ENST00000637625 NDUFC1O43677 76 aa6.89□□□□□ -1.31
CACNA1A-244ENST00000637625 DMBT1Q9UGM3 2413 aaPredicted RBP6.88□□□□□ -1.31
CACNA1A-244ENST00000637625 KRTAP13-3Q3SY46 172 aa6.87□□□□□ -1.31
CACNA1A-244ENST00000637625 PCOTHQ58A44 107 aa6.87□□□□□ -1.31
CACNA1A-244ENST00000637625 H3BPC8 53 aa6.86□□□□□ -1.31
CACNA1A-244ENST00000637625 SERP1Q9Y6X1 66 aa6.84□□□□□ -1.31
CACNA1A-244ENST00000637625 BRK1Q8WUW1 75 aa6.81□□□□□ -1.32
CACNA1A-244ENST00000637625 LOC101927531A0A1B0GV80 90 aa6.79□□□□□ -1.32
CACNA1A-244ENST00000637625 FP248Q71RG6 208 aaPredicted RBP6.79□□□□□ -1.32
CACNA1A-244ENST00000637625 A8MUU9 505 aa6.78□□□□□ -1.32
CACNA1A-244ENST00000637625 C20orf166-AS1Q96NR2 134 aa6.78□□□□□ -1.32
CACNA1A-244ENST00000637625 PSPHP1O15172 72 aa6.76□□□□□ -1.33
CACNA1A-244ENST00000637625 ATP5EP56381 51 aaPredicted RBP6.76□□□□□ -1.33
CACNA1A-244ENST00000637625 CYP4F30PQ9H0H9 118 aa6.76□□□□□ -1.33
CACNA1A-244ENST00000637625 LPAP08519 4548 aa6.72□□□□□ -1.33
CACNA1A-244ENST00000637625 SPANXA2-OT1Q8N9U9 137 aa6.7□□□□□ -1.34
CACNA1A-244ENST00000637625 HRES1P13985 223 aa6.69□□□□□ -1.34
CACNA1A-244ENST00000637625 C7orf65Q6ZTY9 151 aa6.68□□□□□ -1.34
CACNA1A-244ENST00000637625 RPL37P61927 97 aaKnown RBP6.66□□□□□ -1.34
CACNA1A-244ENST00000637625 RBM12B-AS1Q9P1G2 102 aa6.66□□□□□ -1.34
CACNA1A-244ENST00000637625 ATP11AUNQ6ZP68 121 aa6.64□□□□□ -1.35
CACNA1A-244ENST00000637625 LRP2P98164 4655 aa6.62□□□□□ -1.35
CACNA1A-244ENST00000637625 TPRXLQ17RH7 258 aa6.62□□□□□ -1.35
CACNA1A-244ENST00000637625 SPINK7P58062 85 aa6.61□□□□□ -1.35
CACNA1A-244ENST00000637625 KTN1-AS1Q86SY8 53 aa6.61□□□□□ -1.35
CACNA1A-244ENST00000637625 COA5Q86WW8 74 aa6.6□□□□□ -1.35
CACNA1A-244ENST00000637625 KRTAP10-12P60413 245 aa6.59□□□□□ -1.35
CACNA1A-244ENST00000637625 LCE3CQ5T5A8 94 aa6.58□□□□□ -1.36
CACNA1A-244ENST00000637625 HERC1Q15751 4861 aa6.57□□□□□ -1.36
CACNA1A-244ENST00000637625 DMAC1Q96GE9 116 aa6.56□□□□□ -1.36
CACNA1A-244ENST00000637625 ACYP2P14621 99 aa6.52□□□□□ -1.37
CACNA1A-244ENST00000637625 CHKB-CPT1BH3BT56 60 aa6.48□□□□□ -1.37
CACNA1A-244ENST00000637625 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
CACNA1A-244ENST00000637625 Q1T7F1 81 aa6.44□□□□□ -1.38
CACNA1A-244ENST00000637625 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
CACNA1A-244ENST00000637625 MUC17Q685J3 4493 aa6.43□□□□□ -1.38
CACNA1A-244ENST00000637625 COX6B2Q6YFQ2 88 aa6.43□□□□□ -1.38
CACNA1A-244ENST00000637625 A8MUN3 132 aa6.42□□□□□ -1.38
CACNA1A-244ENST00000637625 LCA10Q71F78 164 aa6.41□□□□□ -1.38
CACNA1A-244ENST00000637625 KRTAP4-1Q9BYQ7 146 aa6.35□□□□□ -1.39
CACNA1A-244ENST00000637625 PRR15LQ9BU68 103 aa6.34□□□□□ -1.39
CACNA1A-244ENST00000637625 KRTAP5-3Q6L8H2 238 aa6.33□□□□□ -1.4
CACNA1A-244ENST00000637625 A6NN06 94 aa6.32□□□□□ -1.4
CACNA1A-244ENST00000637625 A8MU10 97 aa6.32□□□□□ -1.4
CACNA1A-244ENST00000637625 LINC01558Q9Y6Z2 57 aa6.3□□□□□ -1.4
CACNA1A-244ENST00000637625 S4R3F8 94 aa6.27□□□□□ -1.41
CACNA1A-244ENST00000637625 Q5VV11 94 aa6.26□□□□□ -1.41
CACNA1A-244ENST00000637625 MUC2Q02817 5179 aa6.26□□□□□ -1.41
CACNA1A-244ENST00000637625 H1FX-AS1Q4G0G2 97 aa6.24□□□□□ -1.41
CACNA1A-244ENST00000637625 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
CACNA1A-244ENST00000637625 LINC01554Q52M75 96 aa6.23□□□□□ -1.41
CACNA1A-244ENST00000637625 A0A1B0GU69 56 aa6.22□□□□□ -1.41
CACNA1A-244ENST00000637625 UBR4Q5T4S7 5183 aa6.2□□□□□ -1.42
CACNA1A-244ENST00000637625 RNF213Q63HN8 5207 aa6.17□□□□□ -1.42
CACNA1A-244ENST00000637625 A6NED7 52 aa6.14□□□□□ -1.43
CACNA1A-244ENST00000637625 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
CACNA1A-244ENST00000637625 KRTAP19-2Q3LHN2 52 aa6.12□□□□□ -1.43
CACNA1A-244ENST00000637625 CDC42SE1Q9NRR8 79 aa6.11□□□□□ -1.43
CACNA1A-244ENST00000637625 KRTAP10-6P60371 365 aaPredicted RBP6.11□□□□□ -1.43
CACNA1A-244ENST00000637625 CSAG1Q6PB30 78 aa6.07□□□□□ -1.44
CACNA1A-244ENST00000637625 FLGP20930 4061 aaPredicted RBP6.06□□□□□ -1.44
CACNA1A-244ENST00000637625 LCE3EQ5T5B0 92 aa6.04□□□□□ -1.44
CACNA1A-244ENST00000637625 KRTAP10-5P60370 271 aa6.03□□□□□ -1.44
CACNA1A-244ENST00000637625 FAT4Q6V0I7 4981 aa6.01□□□□□ -1.45
CACNA1A-244ENST00000637625 UQCR11O14957 56 aa6.01□□□□□ -1.45
CACNA1A-244ENST00000637625 P0C880 135 aa6□□□□□ -1.45
CACNA1A-244ENST00000637625 A0A1B0GU33 70 aa5.99□□□□□ -1.45
CACNA1A-244ENST00000637625 MIR22HGQ0VDD5 57 aa5.98□□□□□ -1.45
CACNA1A-244ENST00000637625 SPATA8Q6RVD6 105 aa5.96□□□□□ -1.45
CACNA1A-244ENST00000637625 H0YAA0 97 aa5.95□□□□□ -1.46
CACNA1A-244ENST00000637625 K7ERS5 55 aa5.92□□□□□ -1.46
CACNA1A-244ENST00000637625 KRTAP13-4Q3LI77 160 aa5.92□□□□□ -1.46
CACNA1A-244ENST00000637625 MT1HP80294 61 aa5.86□□□□□ -1.47
CACNA1A-244ENST00000637625 M0R2T5 61 aa5.85□□□□□ -1.47
CACNA1A-244ENST00000637625 A0A0D9SG42 100 aa5.85□□□□□ -1.47
CACNA1A-244ENST00000637625 M0QZ58 72 aa5.79□□□□□ -1.48
CACNA1A-244ENST00000637625 ROMO1P60602 79 aa5.79□□□□□ -1.48
CACNA1A-244ENST00000637625 R4GN34 69 aa5.77□□□□□ -1.49
CACNA1A-244ENST00000637625 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
CACNA1A-244ENST00000637625 KRTAP12-2P59991 146 aa5.74□□□□□ -1.49
CACNA1A-244ENST00000637625 KRTAP25-1Q3LHN0 102 aa5.7□□□□□ -1.5
CACNA1A-244ENST00000637625 LCE1EQ5T753 118 aa5.68□□□□□ -1.5
CACNA1A-244ENST00000637625 MT2AP02795 61 aa5.65□□□□□ -1.5
CACNA1A-244ENST00000637625 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
CACNA1A-244ENST00000637625 MT1FP04733 61 aa5.64□□□□□ -1.51
CACNA1A-244ENST00000637625 KRTAP10-7P60409 375 aaPredicted RBP5.64□□□□□ -1.51
CACNA1A-244ENST00000637625 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
CACNA1A-244ENST00000637625 CRIPTQ9P021 101 aa5.59□□□□□ -1.51
CACNA1A-244ENST00000637625 SPRR2GQ9BYE4 73 aa5.5□□□□□ -1.53
CACNA1A-244ENST00000637625 SPRR5A0A1B0GTR4 108 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms